RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 RGL2O15211 777 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 SLC34A2O95436 690 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 EPS15P42566 896 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 CC2D2BQ6DHV5 1058 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 CYP4F22Q6NT55 531 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 LARGE2Q8N3Y3 721 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 RPGRQ92834 1020 aaKnown RBP20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 GPR101Q96P66 508 aaPredicted RBP20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 NYXQ9GZU5 481 aa20.55■□□□□ 0.88
PLXNB3-208ENST00000485980 NUDCQ9Y266 331 aa20.54■□□□□ 0.88
PLXNB3-208ENST00000485980 TRAF5O00463 557 aa20.53■□□□□ 0.88
PLXNB3-208ENST00000485980 U2AF1L5P0DN76 240 aaPredicted RBP20.53■□□□□ 0.88
PLXNB3-208ENST00000485980 U2AF1Q01081 240 aaKnown RBP eCLIP20.53■□□□□ 0.88
PLXNB3-208ENST00000485980 SCNN1DP51172 638 aa20.52■□□□□ 0.88
PLXNB3-208ENST00000485980 MLLT1Q03111 559 aaPredicted RBP20.52■□□□□ 0.88
PLXNB3-208ENST00000485980 CRY2Q49AN0 593 aa20.52■□□□□ 0.88
PLXNB3-208ENST00000485980 MIS18AQ9NYP9 233 aa20.52■□□□□ 0.88
PLXNB3-208ENST00000485980 TSKSQ9UJT2 592 aa20.52■□□□□ 0.88
PLXNB3-208ENST00000485980 ABCC12Q96J65 1359 aa20.51■□□□□ 0.87
PLXNB3-208ENST00000485980 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
PLXNB3-208ENST00000485980 CST9Q5W186 159 aa20.51■□□□□ 0.87
PLXNB3-208ENST00000485980 USP50Q70EL3 339 aaPredicted RBP20.51■□□□□ 0.87
PLXNB3-208ENST00000485980 GPTP24298 496 aa20.5■□□□□ 0.87
PLXNB3-208ENST00000485980 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
PLXNB3-208ENST00000485980 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
PLXNB3-208ENST00000485980 CFAP44Q96MT7 982 aa20.5■□□□□ 0.87
PLXNB3-208ENST00000485980 COL4A5P29400 1685 aa20.5■□□□□ 0.87
PLXNB3-208ENST00000485980 LTBP1Q14766 1721 aa20.5■□□□□ 0.87
PLXNB3-208ENST00000485980 AOC2O75106 756 aa20.49■□□□□ 0.87
PLXNB3-208ENST00000485980 GRIPAP1Q4V328 841 aa20.49■□□□□ 0.87
PLXNB3-208ENST00000485980 RBM17Q96I25 401 aaKnown RBP20.49■□□□□ 0.87
PLXNB3-208ENST00000485980 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
PLXNB3-208ENST00000485980 SNED1Q8TER0 1413 aa20.49■□□□□ 0.87
PLXNB3-208ENST00000485980 TRPM7Q96QT4 1865 aa20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 ERVV-1B6SEH8 477 aa20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 PPEF1O14829 653 aaPredicted RBP20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 HOXA10P31260 410 aaPredicted RBP20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 KIF6Q6ZMV9 814 aa20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 SLC51AQ86UW1 340 aa20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 TLL2Q9Y6L7 1015 aa20.48■□□□□ 0.87
PLXNB3-208ENST00000485980 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
PLXNB3-208ENST00000485980 HTATSF1O43719 755 aaKnown RBP20.47■□□□□ 0.87
PLXNB3-208ENST00000485980 MYL6BP14649 208 aa20.47■□□□□ 0.87
PLXNB3-208ENST00000485980 TTLL7Q6ZT98 887 aa20.47■□□□□ 0.87
PLXNB3-208ENST00000485980 MAP3K15Q6ZN16 1313 aa20.47■□□□□ 0.87
PLXNB3-208ENST00000485980 NUP98P52948 1817 aa20.46■□□□□ 0.87
PLXNB3-208ENST00000485980 MAP2K2P36507 400 aa20.46■□□□□ 0.87
PLXNB3-208ENST00000485980 SUSD4Q5VX71 490 aa20.46■□□□□ 0.87
PLXNB3-208ENST00000485980 CRAMP1Q96RY5 1269 aa20.46■□□□□ 0.87
PLXNB3-208ENST00000485980 ZBTB3Q9H5J0 574 aa20.46■□□□□ 0.87
PLXNB3-208ENST00000485980 ADARB2Q9NS39 739 aaKnown RBP20.46■□□□□ 0.87
PLXNB3-208ENST00000485980 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
PLXNB3-208ENST00000485980 CELF2O95319 508 aaKnown RBP20.45■□□□□ 0.86
PLXNB3-208ENST00000485980 AOC3Q16853 763 aa20.45■□□□□ 0.86
PLXNB3-208ENST00000485980 RGS19P49795 217 aa20.44■□□□□ 0.86
PLXNB3-208ENST00000485980 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
PLXNB3-208ENST00000485980 UBN2Q6ZU65 1347 aa20.44■□□□□ 0.86
PLXNB3-208ENST00000485980 THSD7BQ9C0I4 1608 aa20.43■□□□□ 0.86
PLXNB3-208ENST00000485980 SAPCD2Q86UD0 394 aa20.43■□□□□ 0.86
PLXNB3-208ENST00000485980 ZNF408Q9H9D4 720 aa20.43■□□□□ 0.86
PLXNB3-208ENST00000485980 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
PLXNB3-208ENST00000485980 NLRP3Q96P20 1036 aa20.42■□□□□ 0.86
PLXNB3-208ENST00000485980 GLIS2Q9BZE0 524 aaPredicted RBP20.42■□□□□ 0.86
PLXNB3-208ENST00000485980 MCOLN1Q9GZU1 580 aa20.42■□□□□ 0.86
PLXNB3-208ENST00000485980 CA12O43570 354 aa20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 GMPSP49915 693 aaPredicted RBP20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 CXCL9Q07325 125 aa20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 PPP1R42Q7Z4L9 355 aa20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 ZNRF3Q9ULT6 936 aa20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 CASP8AP2Q9UKL3 1982 aa20.41■□□□□ 0.86
PLXNB3-208ENST00000485980 NTSR2O95665 410 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 NEFMP07197 916 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 ZNF34Q8IZ26 560 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 SUPT20HQ8NEM7 779 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 BCL2L13Q9BXK5 485 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
PLXNB3-208ENST00000485980 IBTKQ9P2D0 1353 aaPredicted RBP20.39■□□□□ 0.85
PLXNB3-208ENST00000485980 PPP2R1AP30153 589 aa20.39■□□□□ 0.85
PLXNB3-208ENST00000485980 EIF4A1P60842 406 aaKnown RBP20.39■□□□□ 0.85
PLXNB3-208ENST00000485980 DGKZQ13574 1117 aa20.38■□□□□ 0.85
PLXNB3-208ENST00000485980 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
PLXNB3-208ENST00000485980 GIGYF2Q6Y7W6 1299 aaKnown RBP20.38■□□□□ 0.85
PLXNB3-208ENST00000485980 RAD17O75943 681 aa20.37■□□□□ 0.85
PLXNB3-208ENST00000485980 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
PLXNB3-208ENST00000485980 PARP10Q53GL7 1025 aa20.37■□□□□ 0.85
PLXNB3-208ENST00000485980 DPP8Q6V1X1 898 aaPredicted RBP20.37■□□□□ 0.85
PLXNB3-208ENST00000485980 HHIPL1Q96JK4 782 aa20.37■□□□□ 0.85
PLXNB3-208ENST00000485980 ABCC4O15439 1325 aa20.36■□□□□ 0.85
PLXNB3-208ENST00000485980 TNIP1Q15025 636 aa20.36■□□□□ 0.85
PLXNB3-208ENST00000485980 CDC37L1Q7L3B6 337 aa20.36■□□□□ 0.85
PLXNB3-208ENST00000485980 UTP14AQ9BVJ6 771 aaKnown RBP20.36■□□□□ 0.85
PLXNB3-208ENST00000485980 HIRAP54198 1017 aaPredicted RBP20.35■□□□□ 0.85
PLXNB3-208ENST00000485980 MPNDQ8N594 471 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms