RNA–Protein interactions for RNA: ENST00000485946.1

PCCA-209, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2

Gene PCCA, Length 1,789 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-209ENST00000485946 MAN1A1P33908 653 aa7.58□□□□□ -1.2
PCCA-209ENST00000485946 TTC39BQ5VTQ0 682 aaPredicted RBP7.58□□□□□ -1.2
PCCA-209ENST00000485946 MSL3Q8N5Y2 521 aaKnown RBP7.58□□□□□ -1.2
PCCA-209ENST00000485946 PDILTQ8N807 584 aa7.58□□□□□ -1.2
PCCA-209ENST00000485946 ATL2Q8NHH9 583 aa7.58□□□□□ -1.2
PCCA-209ENST00000485946 ENOX1Q8TC92 643 aaKnown RBP7.58□□□□□ -1.2
PCCA-209ENST00000485946 TSC1Q92574 1164 aa7.58□□□□□ -1.2
PCCA-209ENST00000485946 SLAIN2Q9P270 581 aa7.58□□□□□ -1.2
PCCA-209ENST00000485946 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
PCCA-209ENST00000485946 FAM135BQ49AJ0 1406 aa7.58□□□□□ -1.2
PCCA-209ENST00000485946 ROBO1Q9Y6N7 1651 aa7.57□□□□□ -1.2
PCCA-209ENST00000485946 LDHAP00338 332 aaKnown RBP7.57□□□□□ -1.2
PCCA-209ENST00000485946 AMPD3Q01432 767 aa7.57□□□□□ -1.2
PCCA-209ENST00000485946 HDAC1Q13547 482 aaPredicted RBP7.57□□□□□ -1.2
PCCA-209ENST00000485946 PTCH1Q13635 1447 aa7.57□□□□□ -1.2
PCCA-209ENST00000485946 ENOX2Q16206 610 aaKnown RBP7.57□□□□□ -1.2
PCCA-209ENST00000485946 SPATA31E1Q6ZUB1 1445 aa7.57□□□□□ -1.2
PCCA-209ENST00000485946 YTHDC1Q96MU7 727 aaKnown RBP7.57□□□□□ -1.2
PCCA-209ENST00000485946 ALG2Q9H553 416 aa7.57□□□□□ -1.2
PCCA-209ENST00000485946 VDRP11473 427 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 RASSF7Q02833 373 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 POU5F1BQ06416 359 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 SAFB2Q14151 953 aaKnown RBP eCLIP7.56□□□□□ -1.2
PCCA-209ENST00000485946 ILDR2Q71H61 639 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 OTUD6BQ8N6M0 293 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 SLC26A8Q96RN1 970 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 RSPH9Q9H1X1 276 aaPredicted RBP7.56□□□□□ -1.2
PCCA-209ENST00000485946 PHLPP1O60346 1717 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 TMEM94Q12767 1356 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 SPDYE16A6NNV3 312 aaPredicted RBP7.56□□□□□ -1.2
PCCA-209ENST00000485946 DNAJA1P31689 397 aaKnown RBP7.56□□□□□ -1.2
PCCA-209ENST00000485946 CLCN1P35523 988 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 PDE6BP35913 854 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 ELOAQ14241 798 aaKnown RBP7.56□□□□□ -1.2
PCCA-209ENST00000485946 ODR4Q5SWX8 454 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 CEP120Q8N960 986 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 NEUROD6Q96NK8 337 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 CABP2Q9NPB3 220 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 GPCPD1Q9NPB8 672 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 CASS4Q9NQ75 786 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 FEZ2Q9UHY8 353 aaPredicted RBP7.56□□□□□ -1.2
PCCA-209ENST00000485946 NALCNQ8IZF0 1738 aa7.56□□□□□ -1.2
PCCA-209ENST00000485946 NRXN1Q9ULB1 1477 aa7.55□□□□□ -1.2
PCCA-209ENST00000485946 CNGB1Q14028 1251 aaPredicted RBP7.55□□□□□ -1.2
PCCA-209ENST00000485946 CCSAPQ6IQ19 270 aaPredicted RBP7.55□□□□□ -1.2
PCCA-209ENST00000485946 TGIF2Q9GZN2 237 aa7.55□□□□□ -1.2
PCCA-209ENST00000485946 CEP126Q9P2H0 1117 aa7.55□□□□□ -1.2
PCCA-209ENST00000485946 CTDP1Q9Y5B0 961 aaPredicted RBP7.55□□□□□ -1.2
PCCA-209ENST00000485946 FAM205CA6NFA0 338 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 FCHSD2O94868 740 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 FAM163BP0C2L3 166 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 TNNI2P48788 182 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 MPHOSPH6Q99547 160 aaKnown RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 IER2Q9BTL4 223 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 AVENQ9NQS1 362 aaPredicted RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 MKRN1Q9UHC7 482 aaKnown RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 NHSL1Q5SYE7 1610 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 AHDC1Q5TGY3 1603 aaPredicted RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 G3V3G9 751 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 IFRD1O00458 451 aaPredicted RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 ENPP3O14638 875 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 TIMM44O43615 452 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 MDM2Q00987 491 aaPredicted RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 MAPRE1Q15691 268 aaKnown RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 DPY19L2Q6NUT2 758 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 CCDC174Q6PII3 467 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 TTC30BQ8N4P2 665 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 ACBD3Q9H3P7 528 aa7.54□□□□□ -1.2
PCCA-209ENST00000485946 THRAP3Q9Y2W1 955 aaKnown RBP7.54□□□□□ -1.2
PCCA-209ENST00000485946 SHPRHQ149N8 1683 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 TECPR2O15040 1411 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 PIK3C2GO75747 1445 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 CDC42BPGQ6DT37 1551 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 COL6A1P12109 1028 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 GNALP38405 381 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 USP5P45974 858 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 CCSER2Q9H7U1 834 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 TYW1Q9NV66 732 aaKnown RBP7.53□□□□□ -1.2
PCCA-209ENST00000485946 HDAC5Q9UQL6 1122 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 ADGRL3Q9HAR2 1447 aa7.53□□□□□ -1.2
PCCA-209ENST00000485946 LDHCP07864 332 aa7.52□□□□□ -1.21
PCCA-209ENST00000485946 FAM200BP0CF97 657 aa7.52□□□□□ -1.21
PCCA-209ENST00000485946 ATF3P18847 181 aa7.52□□□□□ -1.21
PCCA-209ENST00000485946 DRC7Q8IY82 874 aa7.52□□□□□ -1.21
PCCA-209ENST00000485946 SNRNP27Q8WVK2 155 aaKnown RBP7.52□□□□□ -1.21
PCCA-209ENST00000485946 CDC5LQ99459 802 aaKnown RBP7.52□□□□□ -1.21
PCCA-209ENST00000485946 PUF60Q9UHX1 559 aaKnown RBP7.52□□□□□ -1.21
PCCA-209ENST00000485946 DLC1Q96QB1 1528 aa7.52□□□□□ -1.21
PCCA-209ENST00000485946 KIF1AQ12756 1690 aa7.52□□□□□ -1.21
PCCA-209ENST00000485946 LZTS3O60299 673 aaPredicted RBP7.51□□□□□ -1.21
PCCA-209ENST00000485946 XRCC5P13010 732 aaKnown RBP7.51□□□□□ -1.21
PCCA-209ENST00000485946 VAC14Q08AM6 782 aa7.51□□□□□ -1.21
PCCA-209ENST00000485946 KCTD2Q14681 263 aa7.51□□□□□ -1.21
PCCA-209ENST00000485946 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
PCCA-209ENST00000485946 TSR2Q969E8 191 aaKnown RBP7.51□□□□□ -1.21
PCCA-209ENST00000485946 BOLA1Q9Y3E2 137 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms