RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 NLRP10Q86W26 655 aa23.76■■□□□ 1.39
COL1A1-206ENST00000485870 GPBP1L1Q9HC44 474 aaPredicted RBP23.76■■□□□ 1.39
COL1A1-206ENST00000485870 NFKBIEO00221 500 aa23.75■■□□□ 1.39
COL1A1-206ENST00000485870 GOLGA2Q08379 1002 aa23.75■■□□□ 1.39
COL1A1-206ENST00000485870 TWISTNBQ3B726 338 aaPredicted RBP23.75■■□□□ 1.39
COL1A1-206ENST00000485870 ZNF428Q96B54 188 aa23.75■■□□□ 1.39
COL1A1-206ENST00000485870 CHMP4AQ9BY43 222 aa23.75■■□□□ 1.39
COL1A1-206ENST00000485870 RIC1Q4ADV7 1423 aa23.75■■□□□ 1.39
COL1A1-206ENST00000485870 TCERG1O14776 1098 aaKnown RBP23.74■■□□□ 1.39
COL1A1-206ENST00000485870 CRY2Q49AN0 593 aa23.74■■□□□ 1.39
COL1A1-206ENST00000485870 RIC3Q7Z5B4 369 aa23.73■■□□□ 1.39
COL1A1-206ENST00000485870 FER1L6Q2WGJ9 1857 aa23.73■■□□□ 1.39
COL1A1-206ENST00000485870 ATP5J2-PTCD1G3V325 749 aa23.72■■□□□ 1.39
COL1A1-206ENST00000485870 LMNB1P20700 586 aa23.72■■□□□ 1.39
COL1A1-206ENST00000485870 PRELPP51888 382 aa23.72■■□□□ 1.39
COL1A1-206ENST00000485870 C3orf67Q6ZVT6 689 aa23.72■■□□□ 1.39
COL1A1-206ENST00000485870 RPGRQ92834 1020 aaKnown RBP23.72■■□□□ 1.39
COL1A1-206ENST00000485870 SPINK5Q9NQ38 1064 aaPredicted RBP23.72■■□□□ 1.39
COL1A1-206ENST00000485870 TRMT112Q9UI30 125 aaKnown RBP23.72■■□□□ 1.39
COL1A1-206ENST00000485870 CCDC88AQ3V6T2 1871 aa23.72■■□□□ 1.39
COL1A1-206ENST00000485870 RNF123Q5XPI4 1314 aa23.71■■□□□ 1.39
COL1A1-206ENST00000485870 ALDH1B1P30837 517 aa23.71■■□□□ 1.39
COL1A1-206ENST00000485870 SOGA3Q5TF21 947 aa23.71■■□□□ 1.39
COL1A1-206ENST00000485870 SYNE4Q8N205 404 aa23.71■■□□□ 1.39
COL1A1-206ENST00000485870 ISCA1Q9BUE6 129 aa23.71■■□□□ 1.39
COL1A1-206ENST00000485870 STK31Q9BXU1 1019 aa23.71■■□□□ 1.39
COL1A1-206ENST00000485870 C7orf43Q8WVR3 580 aa23.7■■□□□ 1.38
COL1A1-206ENST00000485870 NLRP3Q96P20 1036 aa23.7■■□□□ 1.38
COL1A1-206ENST00000485870 SH3TC1Q8TE82 1336 aa23.69■■□□□ 1.38
COL1A1-206ENST00000485870 HCLS1P14317 486 aaPredicted RBP23.69■■□□□ 1.38
COL1A1-206ENST00000485870 EXOSC9Q06265 439 aaKnown RBP23.69■■□□□ 1.38
COL1A1-206ENST00000485870 SLC10A5Q5PT55 438 aa23.69■■□□□ 1.38
COL1A1-206ENST00000485870 OLFM4Q6UX06 510 aa23.69■■□□□ 1.38
COL1A1-206ENST00000485870 TAOK3Q9H2K8 898 aa23.69■■□□□ 1.38
COL1A1-206ENST00000485870 CCER2I3L3R5 266 aa23.68■■□□□ 1.38
COL1A1-206ENST00000485870 CCDC93Q567U6 631 aa23.68■■□□□ 1.38
COL1A1-206ENST00000485870 RBM17Q96I25 401 aaKnown RBP23.68■■□□□ 1.38
COL1A1-206ENST00000485870 MYH16Q9H6N6 1097 aa23.68■■□□□ 1.38
COL1A1-206ENST00000485870 DDX58O95786 925 aaKnown RBP23.67■■□□□ 1.38
COL1A1-206ENST00000485870 HOXA10P31260 410 aaPredicted RBP23.67■■□□□ 1.38
COL1A1-206ENST00000485870 MYD88Q99836 296 aa23.67■■□□□ 1.38
COL1A1-206ENST00000485870 LTBP3Q9NS15 1303 aa23.66■■□□□ 1.38
COL1A1-206ENST00000485870 LAMB2P55268 1798 aa23.66■■□□□ 1.38
COL1A1-206ENST00000485870 FAM89AQ96GI7 184 aa23.66■■□□□ 1.38
COL1A1-206ENST00000485870 TIAM2Q8IVF5 1701 aa23.66■■□□□ 1.38
COL1A1-206ENST00000485870 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
COL1A1-206ENST00000485870 SLC4A2P04920 1241 aa23.65■■□□□ 1.38
COL1A1-206ENST00000485870 RTL5Q5HYW3 569 aaPredicted RBP23.65■■□□□ 1.38
COL1A1-206ENST00000485870 CRAMP1Q96RY5 1269 aa23.65■■□□□ 1.38
COL1A1-206ENST00000485870 VAMP4O75379 141 aa23.64■■□□□ 1.37
COL1A1-206ENST00000485870 C1QTNF8P60827 252 aa23.64■■□□□ 1.37
COL1A1-206ENST00000485870 TRIM28Q13263 835 aaKnown RBP23.64■■□□□ 1.37
COL1A1-206ENST00000485870 G2E3Q7L622 706 aa23.64■■□□□ 1.37
COL1A1-206ENST00000485870 MAP3K2Q9Y2U5 619 aa23.64■■□□□ 1.37
COL1A1-206ENST00000485870 ZC3H4Q9UPT8 1303 aaKnown RBP23.63■■□□□ 1.37
COL1A1-206ENST00000485870 PI4KAP2A4QPH2 592 aa23.63■■□□□ 1.37
COL1A1-206ENST00000485870 DDX60Q8IY21 1712 aaKnown RBP23.63■■□□□ 1.37
COL1A1-206ENST00000485870 PI4KAP1Q8N8J0 262 aa23.63■■□□□ 1.37
COL1A1-206ENST00000485870 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
COL1A1-206ENST00000485870 NMRK2Q9NPI5 230 aa23.63■■□□□ 1.37
COL1A1-206ENST00000485870 DICER1Q9UPY3 1922 aaKnown RBP23.63■■□□□ 1.37
COL1A1-206ENST00000485870 PPEF1O14829 653 aaPredicted RBP23.62■■□□□ 1.37
COL1A1-206ENST00000485870 FKBP4Q02790 459 aaKnown RBP eCLIP23.62■■□□□ 1.37
COL1A1-206ENST00000485870 KSR2Q6VAB6 950 aa23.62■■□□□ 1.37
COL1A1-206ENST00000485870 SLC51AQ86UW1 340 aa23.62■■□□□ 1.37
COL1A1-206ENST00000485870 RTKN2Q8IZC4 609 aa23.62■■□□□ 1.37
COL1A1-206ENST00000485870 ABCC4O15439 1325 aa23.61■■□□□ 1.37
COL1A1-206ENST00000485870 KDM2BQ8NHM5 1336 aa23.61■■□□□ 1.37
COL1A1-206ENST00000485870 KIF3CO14782 793 aa23.61■■□□□ 1.37
COL1A1-206ENST00000485870 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
COL1A1-206ENST00000485870 CACNA1FO60840 1977 aa23.6■■□□□ 1.37
COL1A1-206ENST00000485870 FLIIQ13045 1269 aa23.6■■□□□ 1.37
COL1A1-206ENST00000485870 CCDC191Q8NCU4 936 aa23.6■■□□□ 1.37
COL1A1-206ENST00000485870 ZNF277Q9NRM2 450 aaPredicted RBP23.6■■□□□ 1.37
COL1A1-206ENST00000485870 IRS4O14654 1257 aaPredicted RBP23.59■■□□□ 1.37
COL1A1-206ENST00000485870 DDX46Q7L014 1031 aaKnown RBP23.59■■□□□ 1.37
COL1A1-206ENST00000485870 ZBTB38Q8NAP3 1195 aaPredicted RBP23.59■■□□□ 1.37
COL1A1-206ENST00000485870 CWC25Q9NXE8 425 aaPredicted RBP23.59■■□□□ 1.37
COL1A1-206ENST00000485870 CC2D2BQ6DHV5 1058 aa23.58■■□□□ 1.37
COL1A1-206ENST00000485870 SNED1Q8TER0 1413 aa23.58■■□□□ 1.36
COL1A1-206ENST00000485870 TAF1P21675 1872 aa23.58■■□□□ 1.36
COL1A1-206ENST00000485870 NEXNQ0ZGT2 675 aa23.57■■□□□ 1.36
COL1A1-206ENST00000485870 FKBP5Q13451 457 aaPredicted RBP23.57■■□□□ 1.36
COL1A1-206ENST00000485870 JARID2Q92833 1246 aaPredicted RBP23.57■■□□□ 1.36
COL1A1-206ENST00000485870 GLTPD2A6NH11 291 aa23.56■■□□□ 1.36
COL1A1-206ENST00000485870 PCCAP05165 728 aaPredicted RBP23.56■■□□□ 1.36
COL1A1-206ENST00000485870 IGKV5-2P06315 115 aa23.56■■□□□ 1.36
COL1A1-206ENST00000485870 TMX4Q9H1E5 349 aaPredicted RBP23.56■■□□□ 1.36
COL1A1-206ENST00000485870 RRAGCQ9HB90 399 aa23.56■■□□□ 1.36
COL1A1-206ENST00000485870 E9PSI1 815 aa23.55■■□□□ 1.36
COL1A1-206ENST00000485870 GRAPQ13588 217 aa23.55■■□□□ 1.36
COL1A1-206ENST00000485870 MIER1Q8N108 512 aa23.55■■□□□ 1.36
COL1A1-206ENST00000485870 GRAPLQ8TC17 118 aaPredicted RBP23.55■■□□□ 1.36
COL1A1-206ENST00000485870 PSMD1Q99460 953 aa23.55■■□□□ 1.36
COL1A1-206ENST00000485870 ATP6V0A2Q9Y487 856 aa23.55■■□□□ 1.36
COL1A1-206ENST00000485870 BBOX1O75936 387 aa23.54■■□□□ 1.36
COL1A1-206ENST00000485870 IARSP41252 1262 aaKnown RBP23.54■■□□□ 1.36
COL1A1-206ENST00000485870 SF3B3Q15393 1217 aaKnown RBP23.54■■□□□ 1.36
COL1A1-206ENST00000485870 CWF19L2Q2TBE0 894 aaKnown RBP23.54■■□□□ 1.36
COL1A1-206ENST00000485870 GRIPAP1Q4V328 841 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms