RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
HPS4-214ENST00000485842 ISCA1Q9BUE6 129 aa15.12■□□□□ 0.01
HPS4-214ENST00000485842 METTL22Q9BUU2 404 aaPredicted RBP15.12■□□□□ 0.01
HPS4-214ENST00000485842 UTP14AQ9BVJ6 771 aaKnown RBP15.12■□□□□ 0.01
HPS4-214ENST00000485842 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
HPS4-214ENST00000485842 PDE6BP35913 854 aa15.11■□□□□ 0.01
HPS4-214ENST00000485842 NEXNQ0ZGT2 675 aa15.11■□□□□ 0.01
HPS4-214ENST00000485842 ALDH1L2Q3SY69 923 aa15.11■□□□□ 0.01
HPS4-214ENST00000485842 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
HPS4-214ENST00000485842 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
HPS4-214ENST00000485842 BRCA1P38398 1863 aaKnown RBP15.11■□□□□ 0.01
HPS4-214ENST00000485842 F6X3S4 739 aa15.1■□□□□ 0.01
HPS4-214ENST00000485842 GPR162Q16538 588 aa15.1■□□□□ 0.01
HPS4-214ENST00000485842 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
HPS4-214ENST00000485842 H0YIN7 160 aa15.09■□□□□ 0.01
HPS4-214ENST00000485842 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
HPS4-214ENST00000485842 CACNA1SQ13698 1873 aa15.09■□□□□ 0.01
HPS4-214ENST00000485842 YBX3P16989 372 aaKnown RBP eCLIP15.08■□□□□ 0
HPS4-214ENST00000485842 KCNA3P22001 575 aa15.08■□□□□ 0
HPS4-214ENST00000485842 RARSP54136 660 aaKnown RBP15.08■□□□□ 0
HPS4-214ENST00000485842 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
HPS4-214ENST00000485842 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
HPS4-214ENST00000485842 SYNE4Q8N205 404 aa15.08■□□□□ 0
HPS4-214ENST00000485842 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 08e-7■□□□□ 8.8
HPS4-214ENST00000485842 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
HPS4-214ENST00000485842 BCS1LQ9Y276 419 aa15.08■□□□□ 0
HPS4-214ENST00000485842 RNF123Q5XPI4 1314 aa15.08■□□□□ 0
HPS4-214ENST00000485842 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
HPS4-214ENST00000485842 RIC1Q4ADV7 1423 aa15.08■□□□□ 0
HPS4-214ENST00000485842 DDX60Q8IY21 1712 aaKnown RBP15.07■□□□□ 0
HPS4-214ENST00000485842 LAMB2P55268 1798 aa15.07■□□□□ 0
HPS4-214ENST00000485842 IGKV5-2P06315 115 aa15.07■□□□□ 0
HPS4-214ENST00000485842 HCLS1P14317 486 aaPredicted RBP15.07■□□□□ 0
HPS4-214ENST00000485842 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
HPS4-214ENST00000485842 FAM89AQ96GI7 184 aa15.07■□□□□ 0
HPS4-214ENST00000485842 PIM2Q9P1W9 311 aa15.07■□□□□ 0
HPS4-214ENST00000485842 NEURL1BA8MQ27 555 aa15.06■□□□□ 0
HPS4-214ENST00000485842 SLC4A10Q6U841 1118 aa15.06■□□□□ 0
HPS4-214ENST00000485842 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
HPS4-214ENST00000485842 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
HPS4-214ENST00000485842 PTPRCP08575 1304 aa15.06■□□□□ 0
HPS4-214ENST00000485842 SRGNP10124 158 aa15.05■□□□□ -0
HPS4-214ENST00000485842 DALRD3Q5D0E6 543 aaKnown RBP15.05■□□□□ -0
HPS4-214ENST00000485842 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
HPS4-214ENST00000485842 LINS1Q8NG48 757 aa15.05■□□□□ -0
HPS4-214ENST00000485842 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
HPS4-214ENST00000485842 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
HPS4-214ENST00000485842 KIF16BQ96L93 1317 aa15.04■□□□□ -0
HPS4-214ENST00000485842 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
HPS4-214ENST00000485842 NPR1P16066 1061 aa15.04■□□□□ -0
HPS4-214ENST00000485842 BEND3Q5T5X7 828 aa15.04■□□□□ -0
HPS4-214ENST00000485842 STYK1Q6J9G0 422 aa15.04■□□□□ -0
HPS4-214ENST00000485842 TTLL6Q8N841 843 aa15.04■□□□□ -0
HPS4-214ENST00000485842 ZBTB38Q8NAP3 1195 aaPredicted RBP15.04■□□□□ -0
HPS4-214ENST00000485842 MASTLQ96GX5 879 aa15.04■□□□□ -0
HPS4-214ENST00000485842 NLRP3Q96P20 1036 aa15.04■□□□□ -0
HPS4-214ENST00000485842 NOB1Q9ULX3 412 aaKnown RBP15.04■□□□□ -0
HPS4-214ENST00000485842 KLRG2A4D1S0 409 aaPredicted RBP15.03■□□□□ -0
HPS4-214ENST00000485842 IRS4O14654 1257 aaPredicted RBP15.03■□□□□ -0
HPS4-214ENST00000485842 BCAR3O75815 825 aa15.03■□□□□ -0
HPS4-214ENST00000485842 SLC10A5Q5PT55 438 aa15.03■□□□□ -0
HPS4-214ENST00000485842 UBE3BQ7Z3V4 1068 aa15.03■□□□□ -0
HPS4-214ENST00000485842 ZNF219Q9P2Y4 722 aaPredicted RBP15.03■□□□□ -0
HPS4-214ENST00000485842 SLX4Q8IY92 1834 aa15.02■□□□□ -0
HPS4-214ENST00000485842 GCKRQ14397 625 aa15.02■□□□□ -0
HPS4-214ENST00000485842 CRY2Q49AN0 593 aa15.02■□□□□ -0
HPS4-214ENST00000485842 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
HPS4-214ENST00000485842 CNKSR1Q969H4 720 aa15.02■□□□□ -0
HPS4-214ENST00000485842 SRCIN1Q9C0H9 1055 aa15.02■□□□□ -0
HPS4-214ENST00000485842 CDHR2Q9BYE9 1310 aa15.01□□□□□ -0.01
HPS4-214ENST00000485842 GRIN3BO60391 1043 aa15.01□□□□□ -0.01
HPS4-214ENST00000485842 BRPF1P55201 1214 aaPredicted RBP15.01□□□□□ -0.01
HPS4-214ENST00000485842 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
HPS4-214ENST00000485842 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
HPS4-214ENST00000485842 MYH3P11055 1940 aa15□□□□□ -0.01
HPS4-214ENST00000485842 ALDH1L1O75891 902 aa15□□□□□ -0.01
HPS4-214ENST00000485842 HSP90B1P14625 803 aaKnown RBP15□□□□□ -0.01
HPS4-214ENST00000485842 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
HPS4-214ENST00000485842 H7C1W4 665 aa14.99□□□□□ -0.01
HPS4-214ENST00000485842 C21orf2O43822 256 aa14.99□□□□□ -0.01
HPS4-214ENST00000485842 PDE8AO60658 829 aa14.99□□□□□ -0.01
HPS4-214ENST00000485842 ALDH1B1P30837 517 aa14.99□□□□□ -0.01
HPS4-214ENST00000485842 ARHGAP27Q6ZUM4 889 aa14.99□□□□□ -0.01
HPS4-214ENST00000485842 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
HPS4-214ENST00000485842 TAF1P21675 1872 aa14.99□□□□□ -0.01
HPS4-214ENST00000485842 ABCC4O15439 1325 aa14.98□□□□□ -0.01
HPS4-214ENST00000485842 GRM8O00222 908 aa14.98□□□□□ -0.01
HPS4-214ENST00000485842 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
HPS4-214ENST00000485842 HOXA10P31260 410 aaPredicted RBP14.98□□□□□ -0.01
HPS4-214ENST00000485842 DDX46Q7L014 1031 aaKnown RBP14.98□□□□□ -0.01
HPS4-214ENST00000485842 CCDC85AQ96PX6 553 aaPredicted RBP14.98□□□□□ -0.01
HPS4-214ENST00000485842 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
HPS4-214ENST00000485842 TRIM27P14373 513 aa14.97□□□□□ -0.01
HPS4-214ENST00000485842 CASP7P55210 303 aa14.97□□□□□ -0.01
HPS4-214ENST00000485842 SF3B3Q15393 1217 aaKnown RBP14.97□□□□□ -0.01
HPS4-214ENST00000485842 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
HPS4-214ENST00000485842 CLUAP1Q96AJ1 413 aa14.97□□□□□ -0.01
HPS4-214ENST00000485842 CRAMP1Q96RY5 1269 aa14.97□□□□□ -0.01
HPS4-214ENST00000485842 CHD4Q14839 1912 aa14.97□□□□□ -0.01
HPS4-214ENST00000485842 PPEF1O14829 653 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms