RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 KLRG2A4D1S0 409 aaPredicted RBP16.05■□□□□ 0.16
PTCD1-205ENST00000485746 SLC4A2P04920 1241 aa16.05■□□□□ 0.16
PTCD1-205ENST00000485746 RASSF7Q02833 373 aa16.05■□□□□ 0.16
PTCD1-205ENST00000485746 SOGA3Q5TF21 947 aa16.05■□□□□ 0.16
PTCD1-205ENST00000485746 MYD88Q99836 296 aa16.05■□□□□ 0.16
PTCD1-205ENST00000485746 ABCC12Q96J65 1359 aa16.04■□□□□ 0.16
PTCD1-205ENST00000485746 MIER1Q8N108 512 aa16.04■□□□□ 0.16
PTCD1-205ENST00000485746 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
PTCD1-205ENST00000485746 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
PTCD1-205ENST00000485746 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
PTCD1-205ENST00000485746 HCLS1P14317 486 aaPredicted RBP16.03■□□□□ 0.16
PTCD1-205ENST00000485746 ISCA1Q9BUE6 129 aa16.03■□□□□ 0.16
PTCD1-205ENST00000485746 TMX4Q9H1E5 349 aaPredicted RBP16.03■□□□□ 0.16
PTCD1-205ENST00000485746 GPBP1L1Q9HC44 474 aaPredicted RBP16.03■□□□□ 0.16
PTCD1-205ENST00000485746 MAP3K2Q9Y2U5 619 aa16.03■□□□□ 0.16
PTCD1-205ENST00000485746 CHD4Q14839 1912 aa16.02■□□□□ 0.16
PTCD1-205ENST00000485746 VAMP4O75379 141 aa16.02■□□□□ 0.16
PTCD1-205ENST00000485746 LMNB1P20700 586 aa16.02■□□□□ 0.16
PTCD1-205ENST00000485746 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
PTCD1-205ENST00000485746 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
PTCD1-205ENST00000485746 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.16
PTCD1-205ENST00000485746 PI4KAP2A4QPH2 592 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 E9PSI1 815 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 CCDC93Q567U6 631 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 KSR2Q6VAB6 950 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 PI4KAP1Q8N8J0 262 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 FAM89AQ96GI7 184 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 METTL22Q9BUU2 404 aaPredicted RBP16.01■□□□□ 0.15
PTCD1-205ENST00000485746 NUP98P52948 1817 aa16.01■□□□□ 0.15
PTCD1-205ENST00000485746 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
PTCD1-205ENST00000485746 TRIM28Q13263 835 aaKnown RBP16■□□□□ 0.15
PTCD1-205ENST00000485746 FKBP5Q13451 457 aaPredicted RBP16■□□□□ 0.15
PTCD1-205ENST00000485746 CRY2Q49AN0 593 aa16■□□□□ 0.15
PTCD1-205ENST00000485746 G2E3Q7L622 706 aa16■□□□□ 0.15
PTCD1-205ENST00000485746 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
PTCD1-205ENST00000485746 CWC25Q9NXE8 425 aaPredicted RBP16■□□□□ 0.15
PTCD1-205ENST00000485746 FLIIQ13045 1269 aa15.99■□□□□ 0.15
PTCD1-205ENST00000485746 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
PTCD1-205ENST00000485746 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
PTCD1-205ENST00000485746 RTKN2Q8IZC4 609 aa15.99■□□□□ 0.15
PTCD1-205ENST00000485746 CCDC191Q8NCU4 936 aa15.99■□□□□ 0.15
PTCD1-205ENST00000485746 CRAMP1Q96RY5 1269 aa15.99■□□□□ 0.15
PTCD1-205ENST00000485746 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
PTCD1-205ENST00000485746 ZNF521Q96K83 1311 aa15.98■□□□□ 0.15
PTCD1-205ENST00000485746 NFKBIEO00221 500 aa15.98■□□□□ 0.15
PTCD1-205ENST00000485746 IRS4O14654 1257 aaPredicted RBP15.98■□□□□ 0.15
PTCD1-205ENST00000485746 PPEF1O14829 653 aaPredicted RBP15.98■□□□□ 0.15
PTCD1-205ENST00000485746 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
PTCD1-205ENST00000485746 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
PTCD1-205ENST00000485746 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
PTCD1-205ENST00000485746 SLFN5Q08AF3 891 aa15.96■□□□□ 0.15
PTCD1-205ENST00000485746 CC2D2BQ6DHV5 1058 aa15.96■□□□□ 0.15
PTCD1-205ENST00000485746 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
PTCD1-205ENST00000485746 C7orf43Q8WVR3 580 aa15.96■□□□□ 0.15
PTCD1-205ENST00000485746 JARID2Q92833 1246 aaPredicted RBP15.96■□□□□ 0.15
PTCD1-205ENST00000485746 BRCA1P38398 1863 aaKnown RBP15.96■□□□□ 0.15
PTCD1-205ENST00000485746 ADCY9O60503 1353 aa15.96■□□□□ 0.15
PTCD1-205ENST00000485746 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.14
PTCD1-205ENST00000485746 BBOX1O75936 387 aa15.95■□□□□ 0.14
PTCD1-205ENST00000485746 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
PTCD1-205ENST00000485746 FKBP4Q02790 459 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTCD1-205ENST00000485746 DNAAF4Q8WXU2 420 aa15.95■□□□□ 0.14
PTCD1-205ENST00000485746 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
PTCD1-205ENST00000485746 LTBP3Q9NS15 1303 aa15.94■□□□□ 0.14
PTCD1-205ENST00000485746 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
PTCD1-205ENST00000485746 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
PTCD1-205ENST00000485746 DPY19L2Q6NUT2 758 aa15.94■□□□□ 0.14
PTCD1-205ENST00000485746 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
PTCD1-205ENST00000485746 ZNF277Q9NRM2 450 aaPredicted RBP15.94■□□□□ 0.14
PTCD1-205ENST00000485746 DLEC1Q9Y238 1755 aa15.94■□□□□ 0.14
PTCD1-205ENST00000485746 ABCC4O15439 1325 aa15.94■□□□□ 0.14
PTCD1-205ENST00000485746 GOLGB1Q14789 3259 aaKnown RBP15.93■□□□□ 0.14
PTCD1-205ENST00000485746 IGKV5-2P06315 115 aa15.93■□□□□ 0.14
PTCD1-205ENST00000485746 PRELPP51888 382 aa15.93■□□□□ 0.14
PTCD1-205ENST00000485746 GRAPQ13588 217 aa15.93■□□□□ 0.14
PTCD1-205ENST00000485746 CWF19L2Q2TBE0 894 aaKnown RBP15.93■□□□□ 0.14
PTCD1-205ENST00000485746 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
PTCD1-205ENST00000485746 GRAPLQ8TC17 118 aaPredicted RBP15.93■□□□□ 0.14
PTCD1-205ENST00000485746 ZC3H4Q9UPT8 1303 aaKnown RBP15.93■□□□□ 0.14
PTCD1-205ENST00000485746 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
PTCD1-205ENST00000485746 PDE8AO60658 829 aa15.92■□□□□ 0.14
PTCD1-205ENST00000485746 SF3B3Q15393 1217 aaKnown RBP15.92■□□□□ 0.14
PTCD1-205ENST00000485746 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
PTCD1-205ENST00000485746 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
PTCD1-205ENST00000485746 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
PTCD1-205ENST00000485746 SLX4Q8IY92 1834 aa15.91■□□□□ 0.14
PTCD1-205ENST00000485746 F6X3S4 739 aa15.91■□□□□ 0.14
PTCD1-205ENST00000485746 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
PTCD1-205ENST00000485746 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
PTCD1-205ENST00000485746 SP8Q8IXZ3 490 aa15.91■□□□□ 0.14
PTCD1-205ENST00000485746 CCDC85AQ96PX6 553 aaPredicted RBP15.91■□□□□ 0.14
PTCD1-205ENST00000485746 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
PTCD1-205ENST00000485746 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
PTCD1-205ENST00000485746 IARSP41252 1262 aaKnown RBP15.9■□□□□ 0.14
PTCD1-205ENST00000485746 TMC4Q7Z404 712 aa15.9■□□□□ 0.14
PTCD1-205ENST00000485746 SUPT20HQ8NEM7 779 aa15.9■□□□□ 0.14
PTCD1-205ENST00000485746 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
PTCD1-205ENST00000485746 JDP2Q8WYK2 163 aa15.9■□□□□ 0.14
PTCD1-205ENST00000485746 PSMD1Q99460 953 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms