RNA–Protein interactions for RNA: ENST00000485596.5

PDE8A-205, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,999 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-205ENST00000485596 KIAA1524Q8TCG1 905 aa20.43■□□□□ 0.86
PDE8A-205ENST00000485596 MTERF4Q7Z6M4 381 aaKnown RBP20.42■□□□□ 0.86
PDE8A-205ENST00000485596 NAP1L2Q9ULW6 460 aaPredicted RBP20.42■□□□□ 0.86
PDE8A-205ENST00000485596 TMEM2Q9UHN6 1383 aa20.42■□□□□ 0.86
PDE8A-205ENST00000485596 A0A0D9SFI3 127 aa20.42■□□□□ 0.86
PDE8A-205ENST00000485596 NAA30Q147X3 362 aaPredicted RBP20.42■□□□□ 0.86
PDE8A-205ENST00000485596 SIRT1Q96EB6 747 aa20.42■□□□□ 0.86
PDE8A-205ENST00000485596 ZSWIM6Q9HCJ5 1215 aa20.42■□□□□ 0.86
PDE8A-205ENST00000485596 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
PDE8A-205ENST00000485596 U2AF2P26368 475 aaKnown RBP eCLIP20.41■□□□□ 0.862e-11■□□□□ 11.2
PDE8A-205ENST00000485596 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
PDE8A-205ENST00000485596 EAF2Q96CJ1 260 aaPredicted RBP20.41■□□□□ 0.86
PDE8A-205ENST00000485596 SPATA32Q96LK8 384 aa20.41■□□□□ 0.86
PDE8A-205ENST00000485596 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
PDE8A-205ENST00000485596 TNRQ92752 1358 aa20.41■□□□□ 0.86
PDE8A-205ENST00000485596 JAK2O60674 1132 aa20.41■□□□□ 0.86
PDE8A-205ENST00000485596 ZNF530Q6P9A1 599 aaPredicted RBP20.41■□□□□ 0.86
PDE8A-205ENST00000485596 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
PDE8A-205ENST00000485596 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
PDE8A-205ENST00000485596 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
PDE8A-205ENST00000485596 BLOC1S2Q6QNY1 142 aa20.4■□□□□ 0.86
PDE8A-205ENST00000485596 DNAJC25Q9H1X3 360 aa20.4■□□□□ 0.86
PDE8A-205ENST00000485596 MRVI1Q9Y6F6 885 aa20.4■□□□□ 0.86
PDE8A-205ENST00000485596 TTC21AQ8NDW8 1320 aa20.4■□□□□ 0.86
PDE8A-205ENST00000485596 PDCL2Q8N4E4 241 aa20.4■□□□□ 0.86
PDE8A-205ENST00000485596 SLC27A2O14975 620 aa20.39■□□□□ 0.85
PDE8A-205ENST00000485596 HSP90B1P14625 803 aaKnown RBP20.39■□□□□ 0.85
PDE8A-205ENST00000485596 G3BP1Q13283 466 aaKnown RBP eCLIP20.39■□□□□ 0.85
PDE8A-205ENST00000485596 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
PDE8A-205ENST00000485596 EID1Q9Y6B2 187 aa20.39■□□□□ 0.85
PDE8A-205ENST00000485596 NRKQ7Z2Y5 1582 aa20.39■□□□□ 0.85
PDE8A-205ENST00000485596 ERCC4Q92889 916 aaPredicted RBP20.39■□□□□ 0.85
PDE8A-205ENST00000485596 CBX8Q9HC52 389 aa20.39■□□□□ 0.85
PDE8A-205ENST00000485596 ZNF589Q86UQ0 364 aaPredicted RBP20.38■□□□□ 0.85
PDE8A-205ENST00000485596 FAM200AQ8TCP9 573 aa20.38■□□□□ 0.85
PDE8A-205ENST00000485596 ZSCAN31Q96LW9 406 aaPredicted RBP20.38■□□□□ 0.85
PDE8A-205ENST00000485596 GOLGA6L6A8MZA4 724 aa20.38■□□□□ 0.85
PDE8A-205ENST00000485596 NR1I2O75469 434 aa20.38■□□□□ 0.85
PDE8A-205ENST00000485596 MYL6BP14649 208 aa20.38■□□□□ 0.85
PDE8A-205ENST00000485596 FGD1P98174 961 aa20.38■□□□□ 0.85
PDE8A-205ENST00000485596 SH2B1Q9NRF2 756 aaPredicted RBP20.38■□□□□ 0.85
PDE8A-205ENST00000485596 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
PDE8A-205ENST00000485596 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
PDE8A-205ENST00000485596 CCDC129Q6ZRS4 1044 aa20.37■□□□□ 0.85
PDE8A-205ENST00000485596 SUCLG2Q96I99 432 aa20.37■□□□□ 0.85
PDE8A-205ENST00000485596 BICC1Q9H694 974 aaKnown RBP20.37■□□□□ 0.85
PDE8A-205ENST00000485596 ADAMTS13Q76LX8 1427 aa20.37■□□□□ 0.85
PDE8A-205ENST00000485596 AKAP12Q02952 1782 aa20.37■□□□□ 0.85
PDE8A-205ENST00000485596 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
PDE8A-205ENST00000485596 SPTLC3Q9NUV7 552 aa20.37■□□□□ 0.85
PDE8A-205ENST00000485596 SASH1O94885 1247 aa20.37■□□□□ 0.85
PDE8A-205ENST00000485596 FTOQ9C0B1 505 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDE8A-205ENST00000485596 TTC41PQ6P2S7 1318 aa20.36■□□□□ 0.85
PDE8A-205ENST00000485596 ADCY9O60503 1353 aa20.36■□□□□ 0.85
PDE8A-205ENST00000485596 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
PDE8A-205ENST00000485596 ARID5BQ14865 1188 aa20.35■□□□□ 0.85
PDE8A-205ENST00000485596 IL17RAQ96F46 866 aa20.35■□□□□ 0.85
PDE8A-205ENST00000485596 SPATA31D1Q6ZQQ2 1576 aa20.35■□□□□ 0.85
PDE8A-205ENST00000485596 SLFNL1Q499Z3 407 aa20.35■□□□□ 0.85
PDE8A-205ENST00000485596 SEC62Q99442 399 aaKnown RBP20.35■□□□□ 0.85
PDE8A-205ENST00000485596 DNAJC2Q99543 621 aaKnown RBP20.35■□□□□ 0.85
PDE8A-205ENST00000485596 H3BQV1 296 aa20.34■□□□□ 0.85
PDE8A-205ENST00000485596 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
PDE8A-205ENST00000485596 SMAP1Q8IYB5 467 aaPredicted RBP20.34■□□□□ 0.85
PDE8A-205ENST00000485596 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.34■□□□□ 0.85
PDE8A-205ENST00000485596 V9GYY5 206 aaPredicted RBP20.34■□□□□ 0.85
PDE8A-205ENST00000485596 TECPR2O15040 1411 aa20.34■□□□□ 0.85
PDE8A-205ENST00000485596 ZNF165P49910 485 aa20.34■□□□□ 0.85
PDE8A-205ENST00000485596 GUCY1B3Q02153 619 aa20.34■□□□□ 0.85
PDE8A-205ENST00000485596 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
PDE8A-205ENST00000485596 NPHP1O15259 732 aa20.33■□□□□ 0.85
PDE8A-205ENST00000485596 KCNA6P17658 529 aa20.33■□□□□ 0.85
PDE8A-205ENST00000485596 LEO1Q8WVC0 666 aaPredicted RBP20.33■□□□□ 0.85
PDE8A-205ENST00000485596 MAP4K1Q92918 833 aa20.33■□□□□ 0.85
PDE8A-205ENST00000485596 DBF4Q9UBU7 674 aaPredicted RBP20.33■□□□□ 0.85
PDE8A-205ENST00000485596 PSMA5P28066 241 aa20.32■□□□□ 0.84
PDE8A-205ENST00000485596 TPD52L1Q16890 204 aaPredicted RBP20.32■□□□□ 0.84
PDE8A-205ENST00000485596 BRF1Q92994 677 aa20.32■□□□□ 0.84
PDE8A-205ENST00000485596 TNNT1P13805 278 aa20.32■□□□□ 0.84
PDE8A-205ENST00000485596 ZSCAN20P17040 1043 aaPredicted RBP20.32■□□□□ 0.84
PDE8A-205ENST00000485596 TOB2Q14106 344 aaPredicted RBP20.32■□□□□ 0.84
PDE8A-205ENST00000485596 FILIP1Q7Z7B0 1213 aa20.32■□□□□ 0.84
PDE8A-205ENST00000485596 PGBD1Q96JS3 809 aa20.32■□□□□ 0.84
PDE8A-205ENST00000485596 XRN1Q8IZH2 1706 aaKnown RBP20.31■□□□□ 0.84
PDE8A-205ENST00000485596 RIC3Q7Z5B4 369 aa20.31■□□□□ 0.84
PDE8A-205ENST00000485596 TRMT1Q9NXH9 659 aaKnown RBP20.31■□□□□ 0.84
PDE8A-205ENST00000485596 CLIP2Q9UDT6 1046 aa20.31■□□□□ 0.84
PDE8A-205ENST00000485596 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
PDE8A-205ENST00000485596 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
PDE8A-205ENST00000485596 KAZALD1Q96I82 304 aa20.31■□□□□ 0.84
PDE8A-205ENST00000485596 RGPD1P0DJD0 1748 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 RPS6KB1P23443 525 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 CCDC144BQ3MJ40 725 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 C1orf141Q5JVX7 400 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 RNF20Q5VTR2 975 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 CCDC144CPQ8IYA2 1237 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 TM6SF1Q9BZW5 370 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 GRM8O00222 908 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 PDCP20941 246 aa20.3■□□□□ 0.84
PDE8A-205ENST00000485596 CCT2P78371 535 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms