RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 FAM177BA6PVY3 158 aa25.29■■□□□ 1.64
COL6A2-208ENST00000485591 NEURL1BA8MQ27 555 aa25.29■■□□□ 1.64
COL6A2-208ENST00000485591 BEND3Q5T5X7 828 aa25.29■■□□□ 1.64
COL6A2-208ENST00000485591 FRAT1Q92837 279 aaPredicted RBP25.29■■□□□ 1.64
COL6A2-208ENST00000485591 UTP14AQ9BVJ6 771 aaKnown RBP25.29■■□□□ 1.64
COL6A2-208ENST00000485591 TNRC6CQ9HCJ0 1690 aaKnown RBP25.29■■□□□ 1.64
COL6A2-208ENST00000485591 RIC1Q4ADV7 1423 aa25.29■■□□□ 1.64
COL6A2-208ENST00000485591 CWF19L2Q2TBE0 894 aaKnown RBP25.28■■□□□ 1.64
COL6A2-208ENST00000485591 SLC4A10Q6U841 1118 aa25.28■■□□□ 1.64
COL6A2-208ENST00000485591 CWC25Q9NXE8 425 aaPredicted RBP25.28■■□□□ 1.64
COL6A2-208ENST00000485591 DLEC1Q9Y238 1755 aa25.28■■□□□ 1.64
COL6A2-208ENST00000485591 NPHP1O15259 732 aa25.27■■□□□ 1.64
COL6A2-208ENST00000485591 ST5P78524 1137 aa25.27■■□□□ 1.64
COL6A2-208ENST00000485591 ZKSCAN2Q63HK3 967 aa25.27■■□□□ 1.64
COL6A2-208ENST00000485591 ATF7IPQ6VMQ6 1270 aa25.27■■□□□ 1.64
COL6A2-208ENST00000485591 CD2APQ9Y5K6 639 aa25.27■■□□□ 1.64
COL6A2-208ENST00000485591 COL11A2P13942 1736 aaPredicted RBP25.26■■□□□ 1.63
COL6A2-208ENST00000485591 TRIM27P14373 513 aa25.26■■□□□ 1.63
COL6A2-208ENST00000485591 TRMT112Q9UI30 125 aaKnown RBP25.26■■□□□ 1.63
COL6A2-208ENST00000485591 ABCC4O15439 1325 aa25.26■■□□□ 1.63
COL6A2-208ENST00000485591 ABCC12Q96J65 1359 aa25.26■■□□□ 1.63
COL6A2-208ENST00000485591 ALDH1L1O75891 902 aa25.25■■□□□ 1.63
COL6A2-208ENST00000485591 GTF2E1P29083 439 aaPredicted RBP25.25■■□□□ 1.63
COL6A2-208ENST00000485591 NUTM1Q86Y26 1132 aa25.25■■□□□ 1.63
COL6A2-208ENST00000485591 FHDC1Q9C0D6 1143 aaPredicted RBP25.25■■□□□ 1.63
COL6A2-208ENST00000485591 SRCIN1Q9C0H9 1055 aa25.25■■□□□ 1.63
COL6A2-208ENST00000485591 SH3TC1Q8TE82 1336 aa25.25■■□□□ 1.63
COL6A2-208ENST00000485591 GCKRQ14397 625 aa25.24■■□□□ 1.63
COL6A2-208ENST00000485591 ERFEQ4G0M1 354 aa25.24■■□□□ 1.63
COL6A2-208ENST00000485591 MYH3P11055 1940 aa25.24■■□□□ 1.63
COL6A2-208ENST00000485591 PCCAP05165 728 aaPredicted RBP25.23■■□□□ 1.63
COL6A2-208ENST00000485591 KLHL34Q8N239 644 aa25.23■■□□□ 1.63
COL6A2-208ENST00000485591 CCDC24Q8N4L8 307 aa25.23■■□□□ 1.63
COL6A2-208ENST00000485591 ZBTB38Q8NAP3 1195 aaPredicted RBP25.23■■□□□ 1.63
COL6A2-208ENST00000485591 BRIP1Q9BX63 1249 aa25.23■■□□□ 1.63
COL6A2-208ENST00000485591 BRCA1P38398 1863 aaKnown RBP25.23■■□□□ 1.63
COL6A2-208ENST00000485591 CCT4P50991 539 aaKnown RBP25.22■■□□□ 1.63
COL6A2-208ENST00000485591 SLC10A5Q5PT55 438 aa25.21■■□□□ 1.63
COL6A2-208ENST00000485591 FAM89AQ96GI7 184 aa25.21■■□□□ 1.63
COL6A2-208ENST00000485591 TNNQ9UQP3 1299 aa25.21■■□□□ 1.63
COL6A2-208ENST00000485591 CDHR2Q9BYE9 1310 aa25.2■■□□□ 1.62
COL6A2-208ENST00000485591 TGFB2P61812 414 aa25.2■■□□□ 1.62
COL6A2-208ENST00000485591 SYT17Q9BSW7 474 aa25.2■■□□□ 1.62
COL6A2-208ENST00000485591 PDE6BP35913 854 aa25.19■■□□□ 1.62
COL6A2-208ENST00000485591 INTS3Q68E01 1043 aaKnown RBP25.19■■□□□ 1.62
COL6A2-208ENST00000485591 SYNE4Q8N205 404 aa25.19■■□□□ 1.62
COL6A2-208ENST00000485591 H7C1W4 665 aa25.18■■□□□ 1.62
COL6A2-208ENST00000485591 CLUAP1Q96AJ1 413 aa25.18■■□□□ 1.62
COL6A2-208ENST00000485591 PDZRN3Q9UPQ7 1066 aa25.18■■□□□ 1.62
COL6A2-208ENST00000485591 KLRG2A4D1S0 409 aaPredicted RBP25.17■■□□□ 1.62
COL6A2-208ENST00000485591 GRM8O00222 908 aa25.17■■□□□ 1.62
COL6A2-208ENST00000485591 RTL5Q5HYW3 569 aaPredicted RBP25.17■■□□□ 1.62
COL6A2-208ENST00000485591 UBE3BQ7Z3V4 1068 aa25.17■■□□□ 1.62
COL6A2-208ENST00000485591 FTSJ3Q8IY81 847 aaKnown RBP25.17■■□□□ 1.62
COL6A2-208ENST00000485591 DZIP1LQ8IYY4 767 aaKnown RBP25.17■■□□□ 1.62
COL6A2-208ENST00000485591 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.17■■□□□ 1.62
COL6A2-208ENST00000485591 NLGN2Q8NFZ4 835 aa25.17■■□□□ 1.62
COL6A2-208ENST00000485591 IRS4O14654 1257 aaPredicted RBP25.16■■□□□ 1.62
COL6A2-208ENST00000485591 MS4A1P11836 297 aa25.16■■□□□ 1.62
COL6A2-208ENST00000485591 HSP90B1P14625 803 aaKnown RBP25.16■■□□□ 1.62
COL6A2-208ENST00000485591 CASP7P55210 303 aa25.16■■□□□ 1.62
COL6A2-208ENST00000485591 CACNA1SQ13698 1873 aa25.16■■□□□ 1.62
COL6A2-208ENST00000485591 UTYO14607 1347 aa25.15■■□□□ 1.62
COL6A2-208ENST00000485591 HCLS1P14317 486 aaPredicted RBP25.15■■□□□ 1.62
COL6A2-208ENST00000485591 JARID2Q92833 1246 aaPredicted RBP25.15■■□□□ 1.62
COL6A2-208ENST00000485591 C9orf78Q9NZ63 289 aaPredicted RBP25.15■■□□□ 1.62
COL6A2-208ENST00000485591 PLIN1O60240 522 aa25.14■■□□□ 1.62
COL6A2-208ENST00000485591 CRY2Q49AN0 593 aa25.14■■□□□ 1.62
COL6A2-208ENST00000485591 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.62
COL6A2-208ENST00000485591 TMEM57Q8N5G2 664 aa25.14■■□□□ 1.62
COL6A2-208ENST00000485591 NLRP3Q96P20 1036 aa25.14■■□□□ 1.62
COL6A2-208ENST00000485591 H0YIN7 160 aa25.13■■□□□ 1.61
COL6A2-208ENST00000485591 RLBP1P12271 317 aa25.13■■□□□ 1.61
COL6A2-208ENST00000485591 DPEP1P16444 411 aa25.13■■□□□ 1.61
COL6A2-208ENST00000485591 CHRNA5P30532 468 aa25.13■■□□□ 1.61
COL6A2-208ENST00000485591 PDE8AO60658 829 aa25.12■■□□□ 1.61
COL6A2-208ENST00000485591 SRGNP10124 158 aa25.12■■□□□ 1.61
COL6A2-208ENST00000485591 C3orf67Q6ZVT6 689 aa25.12■■□□□ 1.61
COL6A2-208ENST00000485591 PLA2G12BQ9BX93 195 aa25.12■■□□□ 1.61
COL6A2-208ENST00000485591 USP44Q9H0E7 712 aa25.12■■□□□ 1.61
COL6A2-208ENST00000485591 A0A0G2JLW4 131 aa25.11■■□□□ 1.61
COL6A2-208ENST00000485591 NBPF7P0C2Y1 421 aaPredicted RBP25.11■■□□□ 1.61
COL6A2-208ENST00000485591 RRP1P56182 461 aaKnown RBP25.11■■□□□ 1.61
COL6A2-208ENST00000485591 ARFGEF1Q9Y6D6 1849 aa25.1■■□□□ 1.61
COL6A2-208ENST00000485591 KCNA3P22001 575 aa25.1■■□□□ 1.61
COL6A2-208ENST00000485591 PANK1Q8TE04 598 aa25.1■■□□□ 1.61
COL6A2-208ENST00000485591 NPR1P16066 1061 aa25.09■■□□□ 1.61
COL6A2-208ENST00000485591 PDE3AQ14432 1141 aa25.09■■□□□ 1.61
COL6A2-208ENST00000485591 SF3B3Q15393 1217 aaKnown RBP25.09■■□□□ 1.61
COL6A2-208ENST00000485591 STYK1Q6J9G0 422 aa25.09■■□□□ 1.61
COL6A2-208ENST00000485591 MASTLQ96GX5 879 aa25.09■■□□□ 1.61
COL6A2-208ENST00000485591 CTSWP56202 376 aa25.08■■□□□ 1.61
COL6A2-208ENST00000485591 RPGRQ92834 1020 aaKnown RBP25.08■■□□□ 1.61
COL6A2-208ENST00000485591 TAF1P21675 1872 aa25.08■■□□□ 1.61
COL6A2-208ENST00000485591 HOXA10P31260 410 aaPredicted RBP25.07■■□□□ 1.6
COL6A2-208ENST00000485591 ITPRIPQ8IWB1 547 aa25.07■■□□□ 1.6
COL6A2-208ENST00000485591 PIM2Q9P1W9 311 aa25.07■■□□□ 1.6
COL6A2-208ENST00000485591 MEIS3Q99687 375 aa25.06■■□□□ 1.6
COL6A2-208ENST00000485591 SLX4Q8IY92 1834 aa25.06■■□□□ 1.6
COL6A2-208ENST00000485591 SRCAPQ6ZRS2 3230 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms