RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
PEX1-208ENST00000484913 IRS4O14654 1257 aaPredicted RBP13.57□□□□□ -0.24
PEX1-208ENST00000484913 DDX46Q7L014 1031 aaKnown RBP13.57□□□□□ -0.24
PEX1-208ENST00000484913 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
PEX1-208ENST00000484913 UPF3BQ9BZI7 483 aaKnown RBP13.57□□□□□ -0.24
PEX1-208ENST00000484913 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
PEX1-208ENST00000484913 DTNBO60941 627 aa13.57□□□□□ -0.24
PEX1-208ENST00000484913 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
PEX1-208ENST00000484913 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
PEX1-208ENST00000484913 METTL24Q5JXM2 366 aa13.57□□□□□ -0.24
PEX1-208ENST00000484913 LRRC37A3O60309 1634 aa13.57□□□□□ -0.24
PEX1-208ENST00000484913 SASH1O94885 1247 aa13.56□□□□□ -0.24
PEX1-208ENST00000484913 MCCP23508 829 aa13.56□□□□□ -0.24
PEX1-208ENST00000484913 POLA2Q14181 598 aa13.56□□□□□ -0.24
PEX1-208ENST00000484913 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
PEX1-208ENST00000484913 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
PEX1-208ENST00000484913 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
PEX1-208ENST00000484913 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
PEX1-208ENST00000484913 NAP1L2Q9ULW6 460 aaPredicted RBP13.56□□□□□ -0.24
PEX1-208ENST00000484913 MAP3K15Q6ZN16 1313 aa13.55□□□□□ -0.24
PEX1-208ENST00000484913 GLRX3O76003 335 aaKnown RBP13.55□□□□□ -0.24
PEX1-208ENST00000484913 HSP90AB3PQ58FF7 597 aa13.55□□□□□ -0.24
PEX1-208ENST00000484913 TRIM37O94972 964 aa13.55□□□□□ -0.24
PEX1-208ENST00000484913 SRP68Q9UHB9 627 aaKnown RBP13.55□□□□□ -0.24
PEX1-208ENST00000484913 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
PEX1-208ENST00000484913 FOXD4L6Q3SYB3 417 aaPredicted RBP13.55□□□□□ -0.24
PEX1-208ENST00000484913 FOXD4L3Q6VB84 417 aaPredicted RBP13.55□□□□□ -0.24
PEX1-208ENST00000484913 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
PEX1-208ENST00000484913 NEK4P51957 841 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 GJD4Q96KN9 370 aaPredicted RBP13.54□□□□□ -0.24
PEX1-208ENST00000484913 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 SNAP23O00161 211 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 GOLIM4O00461 696 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 ZPR1O75312 459 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 VPS72Q15906 364 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 MPHOSPH8Q99549 860 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 PTPN12Q05209 780 aaKnown RBP13.54□□□□□ -0.24
PEX1-208ENST00000484913 SMARCC1Q92922 1105 aaPredicted RBP13.54□□□□□ -0.24
PEX1-208ENST00000484913 GREM2Q9H772 168 aa13.54□□□□□ -0.24
PEX1-208ENST00000484913 GIGYF2Q6Y7W6 1299 aaKnown RBP13.53□□□□□ -0.24
PEX1-208ENST00000484913 ITGA6P23229 1130 aa13.53□□□□□ -0.24
PEX1-208ENST00000484913 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
PEX1-208ENST00000484913 CHGBP05060 677 aa13.53□□□□□ -0.24
PEX1-208ENST00000484913 CHMLP26374 656 aa13.53□□□□□ -0.24
PEX1-208ENST00000484913 TTC39AQ5SRH9 613 aa13.53□□□□□ -0.24
PEX1-208ENST00000484913 AK7Q96M32 723 aa13.53□□□□□ -0.24
PEX1-208ENST00000484913 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.24
PEX1-208ENST00000484913 NLRP10Q86W26 655 aa13.52□□□□□ -0.24
PEX1-208ENST00000484913 ERBB4Q15303 1308 aa13.52□□□□□ -0.24
PEX1-208ENST00000484913 FRAT2O75474 233 aaPredicted RBP13.52□□□□□ -0.25
PEX1-208ENST00000484913 WASHC4Q2M389 1173 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 TNNI3KQ59H18 835 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 ESYT1Q9BSJ8 1104 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 TRPC5Q9UL62 973 aaPredicted RBP13.52□□□□□ -0.25
PEX1-208ENST00000484913 FPGT-TNNI3KV9GXZ4 949 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 BCL9O00512 1426 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 ANKRD18BA2A2Z9 1011 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 TAF5LO75529 589 aa13.52□□□□□ -0.25
PEX1-208ENST00000484913 FAM227BQ96M60 508 aa13.51□□□□□ -0.25
PEX1-208ENST00000484913 TNS2Q63HR2 1409 aa13.51□□□□□ -0.25
PEX1-208ENST00000484913 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
PEX1-208ENST00000484913 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
PEX1-208ENST00000484913 FGD1P98174 961 aa13.51□□□□□ -0.25
PEX1-208ENST00000484913 LINC00116Q8NCU8 138 aa13.51□□□□□ -0.25
PEX1-208ENST00000484913 SEC31BQ9NQW1 1179 aa13.51□□□□□ -0.25
PEX1-208ENST00000484913 H7C1W4 665 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 UTP14AQ9BVJ6 771 aaKnown RBP13.5□□□□□ -0.25
PEX1-208ENST00000484913 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
PEX1-208ENST00000484913 IFIT1P09914 478 aaKnown RBP13.5□□□□□ -0.25
PEX1-208ENST00000484913 CPA1P15085 419 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 RFC4P35249 363 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 CCDC129Q6ZRS4 1044 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 STK11IPQ8N1F8 1099 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
PEX1-208ENST00000484913 A0A1B0GUL7 405 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 CD2BP2O95400 341 aaKnown RBP13.5□□□□□ -0.25
PEX1-208ENST00000484913 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
PEX1-208ENST00000484913 PRPF40BQ6NWY9 871 aaKnown RBP13.5□□□□□ -0.25
PEX1-208ENST00000484913 C5P01031 1676 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 PXDNLA1KZ92 1463 aa13.5□□□□□ -0.25
PEX1-208ENST00000484913 EYA2O00167 538 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 ADORA1P30542 326 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 FOXO4P98177 505 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 TCEANC2Q96MN5 208 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 IL25Q9H293 177 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 ST18O60284 1047 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
PEX1-208ENST00000484913 ZBTB38Q8NAP3 1195 aaPredicted RBP13.49□□□□□ -0.25
PEX1-208ENST00000484913 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
PEX1-208ENST00000484913 NMIQ13287 307 aaPredicted RBP13.49□□□□□ -0.25
PEX1-208ENST00000484913 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 RUFY2Q8WXA3 655 aa13.49□□□□□ -0.25
PEX1-208ENST00000484913 USP26Q9BXU7 913 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms