RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ZSCAN25Q6NSZ9 544 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 MPRIPQ6WCQ1 1025 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 CEP131Q9UPN4 1083 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 HLTFQ14527 1009 aaKnown RBP eCLIP17.48■□□□□ 0.39
RXRA-203ENST00000484822 CNNM3Q8NE01 707 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 CCDC175P0C221 793 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 CCDC178Q5BJE1 867 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
RXRA-203ENST00000484822 GOPCQ9HD26 462 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 IL16Q14005 1332 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 SKILP12757 684 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 MCM6Q14566 821 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
RXRA-203ENST00000484822 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
RXRA-203ENST00000484822 EXOC5O00471 708 aa17.47■□□□□ 0.39
RXRA-203ENST00000484822 CACNA2D4Q7Z3S7 1137 aa17.47■□□□□ 0.39
RXRA-203ENST00000484822 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
RXRA-203ENST00000484822 RBM5P52756 815 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■■□□ 18.5
RXRA-203ENST00000484822 IDH1O75874 414 aaKnown RBP17.47■□□□□ 0.39
RXRA-203ENST00000484822 SPINK5Q9NQ38 1064 aaPredicted RBP17.47■□□□□ 0.39
RXRA-203ENST00000484822 SSR1P43307 286 aaKnown RBP17.47■□□□□ 0.39
RXRA-203ENST00000484822 C19orf44Q9H6X5 657 aa17.47■□□□□ 0.39
RXRA-203ENST00000484822 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
RXRA-203ENST00000484822 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 TESK2Q96S53 571 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 GTPBP4Q9BZE4 634 aaKnown RBP17.46■□□□□ 0.39
RXRA-203ENST00000484822 ARFGAP3Q9NP61 516 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 DNAI1Q9UI46 699 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 ATP2C2O75185 946 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 YEATS4O95619 227 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 FKBP15Q5T1M5 1219 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 DBF4Q9UBU7 674 aaPredicted RBP17.46■□□□□ 0.39
RXRA-203ENST00000484822 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 F6X3S4 739 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 PPFIA3O75145 1194 aa17.46■□□□□ 0.39
RXRA-203ENST00000484822 MATR3P43243 847 aaKnown RBP eCLIP17.46■□□□□ 0.39
RXRA-203ENST00000484822 SMC1AQ14683 1233 aaKnown RBP17.46■□□□□ 0.39
RXRA-203ENST00000484822 USO1O60763 962 aaKnown RBP17.45■□□□□ 0.38
RXRA-203ENST00000484822 ZBTB9Q96C00 473 aa17.45■□□□□ 0.38
RXRA-203ENST00000484822 TMX3Q96JJ7 454 aa17.45■□□□□ 0.38
RXRA-203ENST00000484822 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
RXRA-203ENST00000484822 GOLGA6L9A6NEM1 432 aa17.45■□□□□ 0.38
RXRA-203ENST00000484822 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
RXRA-203ENST00000484822 YTHDC2Q9H6S0 1430 aaKnown RBP17.45■□□□□ 0.38
RXRA-203ENST00000484822 IGHMBP2P38935 993 aaKnown RBP17.45■□□□□ 0.38
RXRA-203ENST00000484822 TDRD12Q587J7 1177 aaKnown RBP17.45■□□□□ 0.38
RXRA-203ENST00000484822 MAATS1Q7Z4T9 603 aa17.44■□□□□ 0.38
RXRA-203ENST00000484822 PAF1Q8N7H5 531 aa17.44■□□□□ 0.38
RXRA-203ENST00000484822 RRAGDQ9NQL2 400 aaPredicted RBP17.44■□□□□ 0.38
RXRA-203ENST00000484822 GSTTP1A0A1W2PQM5 241 aa17.44■□□□□ 0.38
RXRA-203ENST00000484822 TSHZ3Q63HK5 1081 aa17.44■□□□□ 0.38
RXRA-203ENST00000484822 CCDC150Q8NCX0 1101 aa17.44■□□□□ 0.38
RXRA-203ENST00000484822 PTPRCP08575 1304 aa17.43■□□□□ 0.38
RXRA-203ENST00000484822 UBE4AQ14139 1066 aa17.43■□□□□ 0.38
RXRA-203ENST00000484822 C8orf34Q49A92 452 aa17.43■□□□□ 0.38
RXRA-203ENST00000484822 SRRTQ9BXP5 876 aaKnown RBP17.43■□□□□ 0.38
RXRA-203ENST00000484822 TEX13AQ9BXU3 409 aaPredicted RBP17.43■□□□□ 0.38
RXRA-203ENST00000484822 ABCA8O94911 1581 aa17.43■□□□□ 0.38
RXRA-203ENST00000484822 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
RXRA-203ENST00000484822 TRPM2O94759 1503 aa17.43■□□□□ 0.38
RXRA-203ENST00000484822 ANO6Q4KMQ2 910 aa17.43■□□□□ 0.38
RXRA-203ENST00000484822 CCDC8Q9H0W5 538 aaPredicted RBP17.43■□□□□ 0.38
RXRA-203ENST00000484822 UBAP1LF5GYI3 381 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 USP48Q86UV5 1035 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 FAM200AQ8TCP9 573 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 ARHGEF5Q12774 1597 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 CFAP74Q9C0B2 1584 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 ABCC1P33527 1531 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 NPATQ14207 1427 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 JADE2Q9NQC1 790 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 CAVIN2O95810 425 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 CCDC91Q7Z6B0 441 aa17.42■□□□□ 0.38
RXRA-203ENST00000484822 SLU7O95391 586 aaKnown RBP17.41■□□□□ 0.38
RXRA-203ENST00000484822 IVLP07476 585 aa17.41■□□□□ 0.38
RXRA-203ENST00000484822 CAPN2P17655 700 aa17.41■□□□□ 0.38
RXRA-203ENST00000484822 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
RXRA-203ENST00000484822 UHRF1BP1Q6BDS2 1440 aa17.41■□□□□ 0.38
RXRA-203ENST00000484822 PARD3Q8TEW0 1356 aa17.41■□□□□ 0.38
RXRA-203ENST00000484822 POLR3DP05423 398 aaPredicted RBP17.41■□□□□ 0.38
RXRA-203ENST00000484822 ZSCAN22P10073 491 aaPredicted RBP17.41■□□□□ 0.38
RXRA-203ENST00000484822 POLR3AO14802 1390 aaPredicted RBP17.4■□□□□ 0.38
RXRA-203ENST00000484822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.383e-6■■■■■ 32.7
RXRA-203ENST00000484822 KCNA6P17658 529 aa17.4■□□□□ 0.38
RXRA-203ENST00000484822 NF2P35240 595 aa17.4■□□□□ 0.38
RXRA-203ENST00000484822 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
RXRA-203ENST00000484822 HSP90AA4PQ58FG1 418 aa17.4■□□□□ 0.38
RXRA-203ENST00000484822 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
RXRA-203ENST00000484822 NAA15Q9BXJ9 866 aaKnown RBP17.4■□□□□ 0.38
RXRA-203ENST00000484822 GCOM1H8Y6P7 765 aaPredicted RBP17.4■□□□□ 0.38
RXRA-203ENST00000484822 MYZAPP0CAP1 466 aa17.4■□□□□ 0.38
RXRA-203ENST00000484822 IRX3P78415 501 aaPredicted RBP17.4■□□□□ 0.38
RXRA-203ENST00000484822 TTC22Q5TAA0 569 aa17.39■□□□□ 0.38
RXRA-203ENST00000484822 MYD88Q99836 296 aa17.39■□□□□ 0.38
RXRA-203ENST00000484822 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.39■□□□□ 0.383e-6■■■□□ 16.7
RXRA-203ENST00000484822 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.38
RXRA-203ENST00000484822 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.37
RXRA-203ENST00000484822 ZFYVE16Q7Z3T8 1539 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 935.2 ms