RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 ABCC12Q96J65 1359 aa17.85■□□□□ 0.45
SNX5-212ENST00000484809 NTSR2O95665 410 aa17.85■□□□□ 0.45
SNX5-212ENST00000484809 NPR1P16066 1061 aa17.85■□□□□ 0.45
SNX5-212ENST00000484809 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
SNX5-212ENST00000484809 C9orf131Q5VYM1 1079 aa17.85■□□□□ 0.45
SNX5-212ENST00000484809 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
SNX5-212ENST00000484809 ERFEQ4G0M1 354 aa17.84■□□□□ 0.45
SNX5-212ENST00000484809 PPP1R42Q7Z4L9 355 aa17.84■□□□□ 0.45
SNX5-212ENST00000484809 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
SNX5-212ENST00000484809 LAMB2P55268 1798 aa17.83■□□□□ 0.45
SNX5-212ENST00000484809 C21orf2O43822 256 aa17.83■□□□□ 0.44
SNX5-212ENST00000484809 RASSF7Q02833 373 aa17.83■□□□□ 0.44
SNX5-212ENST00000484809 TCIRG1Q13488 830 aa17.83■□□□□ 0.44
SNX5-212ENST00000484809 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.44
SNX5-212ENST00000484809 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
SNX5-212ENST00000484809 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
SNX5-212ENST00000484809 PLBD2Q8NHP8 589 aa17.83■□□□□ 0.44
SNX5-212ENST00000484809 NFKBIEO00221 500 aa17.82■□□□□ 0.44
SNX5-212ENST00000484809 CRY2Q49AN0 593 aa17.82■□□□□ 0.44
SNX5-212ENST00000484809 WDR63Q8IWG1 891 aa17.82■□□□□ 0.44
SNX5-212ENST00000484809 CHMP4AQ9BY43 222 aa17.82■□□□□ 0.44
SNX5-212ENST00000484809 GPBP1L1Q9HC44 474 aaPredicted RBP17.82■□□□□ 0.44
SNX5-212ENST00000484809 RNF181Q9P0P0 153 aa17.82■□□□□ 0.44
SNX5-212ENST00000484809 SALL2Q9Y467 1007 aaPredicted RBP17.82■□□□□ 0.44
SNX5-212ENST00000484809 NLRP10Q86W26 655 aa17.81■□□□□ 0.44
SNX5-212ENST00000484809 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
SNX5-212ENST00000484809 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
SNX5-212ENST00000484809 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
SNX5-212ENST00000484809 RNF123Q5XPI4 1314 aa17.81■□□□□ 0.44
SNX5-212ENST00000484809 TIAM2Q8IVF5 1701 aa17.8■□□□□ 0.44
SNX5-212ENST00000484809 LMNB1P20700 586 aa17.8■□□□□ 0.44
SNX5-212ENST00000484809 PRELPP51888 382 aa17.8■□□□□ 0.44
SNX5-212ENST00000484809 SLC10A5Q5PT55 438 aa17.8■□□□□ 0.44
SNX5-212ENST00000484809 CCDC30Q5VVM6 783 aa17.8■□□□□ 0.44
SNX5-212ENST00000484809 C7orf43Q8WVR3 580 aa17.8■□□□□ 0.44
SNX5-212ENST00000484809 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
SNX5-212ENST00000484809 ALDH1B1P30837 517 aa17.79■□□□□ 0.44
SNX5-212ENST00000484809 DDX60Q8IY21 1712 aaKnown RBP17.79■□□□□ 0.44
SNX5-212ENST00000484809 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
SNX5-212ENST00000484809 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
SNX5-212ENST00000484809 LTBP3Q9NS15 1303 aa17.78■□□□□ 0.44
SNX5-212ENST00000484809 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
SNX5-212ENST00000484809 HOXA10P31260 410 aaPredicted RBP17.77■□□□□ 0.44
SNX5-212ENST00000484809 TWISTNBQ3B726 338 aaPredicted RBP17.77■□□□□ 0.44
SNX5-212ENST00000484809 ZC3H4Q9UPT8 1303 aaKnown RBP17.77■□□□□ 0.44
SNX5-212ENST00000484809 TAF1P21675 1872 aa17.77■□□□□ 0.43
SNX5-212ENST00000484809 C1QTNF8P60827 252 aa17.76■□□□□ 0.43
SNX5-212ENST00000484809 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
SNX5-212ENST00000484809 TRIM28Q13263 835 aaKnown RBP17.76■□□□□ 0.43
SNX5-212ENST00000484809 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
SNX5-212ENST00000484809 RIC3Q7Z5B4 369 aa17.76■□□□□ 0.43
SNX5-212ENST00000484809 SYNE4Q8N205 404 aa17.76■□□□□ 0.43
SNX5-212ENST00000484809 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
SNX5-212ENST00000484809 NLRP3Q96P20 1036 aa17.76■□□□□ 0.43
SNX5-212ENST00000484809 TRMT112Q9UI30 125 aaKnown RBP17.76■□□□□ 0.43
SNX5-212ENST00000484809 ATP5J2-PTCD1G3V325 749 aa17.75■□□□□ 0.43
SNX5-212ENST00000484809 CCDC93Q567U6 631 aa17.75■□□□□ 0.43
SNX5-212ENST00000484809 CRAMP1Q96RY5 1269 aa17.75■□□□□ 0.43
SNX5-212ENST00000484809 TAOK3Q9H2K8 898 aa17.75■□□□□ 0.43
SNX5-212ENST00000484809 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
SNX5-212ENST00000484809 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
SNX5-212ENST00000484809 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
SNX5-212ENST00000484809 KIF3CO14782 793 aa17.73■□□□□ 0.43
SNX5-212ENST00000484809 HCLS1P14317 486 aaPredicted RBP17.73■□□□□ 0.43
SNX5-212ENST00000484809 OLFM4Q6UX06 510 aa17.73■□□□□ 0.43
SNX5-212ENST00000484809 ZNF521Q96K83 1311 aa17.73■□□□□ 0.43
SNX5-212ENST00000484809 SNED1Q8TER0 1413 aa17.73■□□□□ 0.43
SNX5-212ENST00000484809 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
SNX5-212ENST00000484809 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
SNX5-212ENST00000484809 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
SNX5-212ENST00000484809 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 VAMP4O75379 141 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNX5-212ENST00000484809 RTKN2Q8IZC4 609 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 FAM89AQ96GI7 184 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 MYD88Q99836 296 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 METTL22Q9BUU2 404 aaPredicted RBP17.72■□□□□ 0.43
SNX5-212ENST00000484809 MYH16Q9H6N6 1097 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 NMRK2Q9NPI5 230 aa17.72■□□□□ 0.43
SNX5-212ENST00000484809 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.42
SNX5-212ENST00000484809 KSR2Q6VAB6 950 aa17.71■□□□□ 0.42
SNX5-212ENST00000484809 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
SNX5-212ENST00000484809 GLTPD2A6NH11 291 aa17.7■□□□□ 0.42
SNX5-212ENST00000484809 G2E3Q7L622 706 aa17.7■□□□□ 0.42
SNX5-212ENST00000484809 PI4KAP1Q8N8J0 262 aa17.7■□□□□ 0.42
SNX5-212ENST00000484809 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
SNX5-212ENST00000484809 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
SNX5-212ENST00000484809 MYH3P11055 1940 aa17.69■□□□□ 0.42
SNX5-212ENST00000484809 PPEF1O14829 653 aaPredicted RBP17.69■□□□□ 0.42
SNX5-212ENST00000484809 ABCC4O15439 1325 aa17.69■□□□□ 0.42
SNX5-212ENST00000484809 GRIPAP1Q4V328 841 aa17.68■□□□□ 0.42
SNX5-212ENST00000484809 RTL5Q5HYW3 569 aaPredicted RBP17.68■□□□□ 0.42
SNX5-212ENST00000484809 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
SNX5-212ENST00000484809 PSMD1Q99460 953 aa17.68■□□□□ 0.42
SNX5-212ENST00000484809 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
SNX5-212ENST00000484809 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
SNX5-212ENST00000484809 IRS4O14654 1257 aaPredicted RBP17.67■□□□□ 0.42
SNX5-212ENST00000484809 BBOX1O75936 387 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms