RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 ABCC12Q96J65 1359 aa15.54■□□□□ 0.08
SNRNP200-206ENST00000484372 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
SNRNP200-206ENST00000484372 HOXB7P09629 217 aa15.54■□□□□ 0.08
SNRNP200-206ENST00000484372 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
SNRNP200-206ENST00000484372 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNRNP200-206ENST00000484372 ZNF277Q9NRM2 450 aaPredicted RBP15.54■□□□□ 0.08
SNRNP200-206ENST00000484372 DICER1Q9UPY3 1922 aaKnown RBP15.54■□□□□ 0.08
SNRNP200-206ENST00000484372 DDNO94850 711 aaPredicted RBP15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 NTSR2O95665 410 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 ANXA1P04083 346 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 PROSER3Q2NL68 480 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 LRP10Q7Z4F1 713 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 SYNE4Q8N205 404 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 XAGE3Q8WTP9 111 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 JDP2Q8WYK2 163 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 CRAMP1Q96RY5 1269 aa15.53■□□□□ 0.08
SNRNP200-206ENST00000484372 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
SNRNP200-206ENST00000484372 PSMD1Q99460 953 aa15.52■□□□□ 0.08
SNRNP200-206ENST00000484372 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.08
SNRNP200-206ENST00000484372 WDR90Q96KV7 1748 aa15.51■□□□□ 0.07
SNRNP200-206ENST00000484372 TCIRG1Q13488 830 aa15.51■□□□□ 0.07
SNRNP200-206ENST00000484372 DNAJC5GQ8N7S2 189 aa15.51■□□□□ 0.07
SNRNP200-206ENST00000484372 CHMP4AQ9BY43 222 aa15.51■□□□□ 0.07
SNRNP200-206ENST00000484372 POTECB2RU33 542 aa15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 PPEF1O14829 653 aaPredicted RBP15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 GNAI1P63096 354 aa15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 SLC10A5Q5PT55 438 aa15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 OLFM4Q6UX06 510 aa15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 KLRG1Q96E93 195 aa15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 HYPKQ9NX55 129 aa15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 CHPF2Q9P2E5 772 aa15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
SNRNP200-206ENST00000484372 APAF1O14727 1248 aa15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 EIF6P56537 245 aaKnown RBP15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 NLRP10Q86W26 655 aa15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 PLBD2Q8NHP8 589 aa15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 L3MBTL3Q96JM7 780 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
SNRNP200-206ENST00000484372 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
SNRNP200-206ENST00000484372 TCERG1O14776 1098 aaKnown RBP15.48■□□□□ 0.07
SNRNP200-206ENST00000484372 DUSP27Q5VZP5 1158 aa15.48■□□□□ 0.07
SNRNP200-206ENST00000484372 FZD9O00144 591 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 BBOX1O75936 387 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 HTRA3P83110 453 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 DDX46Q7L014 1031 aaKnown RBP15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 LDHDQ86WU2 507 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 GPC2Q8N158 579 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 LARGE2Q8N3Y3 721 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 SUPT20HQ8NEM7 779 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 MBIPQ9NS73 344 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 HACL1Q9UJ83 578 aa15.47■□□□□ 0.07
SNRNP200-206ENST00000484372 PNMA8AQ86V59 439 aaPredicted RBP15.46■□□□□ 0.07
SNRNP200-206ENST00000484372 VPS33BQ9H267 617 aa15.46■□□□□ 0.07
SNRNP200-206ENST00000484372 TAF1DQ9H5J8 278 aaPredicted RBP15.46■□□□□ 0.07
SNRNP200-206ENST00000484372 ATP6V0A2Q9Y487 856 aa15.46■□□□□ 0.07
SNRNP200-206ENST00000484372 ZNF541Q9H0D2 1346 aa15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 HCLS1P14317 486 aaPredicted RBP15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 LMOD1P29536 600 aaPredicted RBP15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 GOLGA2Q08379 1002 aa15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 EAPPQ56P03 285 aaPredicted RBP15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 C3orf67Q6ZVT6 689 aa15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 NIM1KQ8IY84 436 aa15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
SNRNP200-206ENST00000484372 ABCC4O15439 1325 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 PPIP5K2O43314 1243 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 ZNF853P0CG23 659 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 EPHX2P34913 555 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 TMC4Q7Z404 712 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 GJA3Q9Y6H8 435 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 SCN4AP35499 1836 aa15.44■□□□□ 0.06
SNRNP200-206ENST00000484372 GRAPQ13588 217 aa15.43■□□□□ 0.06
SNRNP200-206ENST00000484372 DPP8Q6V1X1 898 aaPredicted RBP15.43■□□□□ 0.06
SNRNP200-206ENST00000484372 SP8Q8IXZ3 490 aa15.43■□□□□ 0.06
SNRNP200-206ENST00000484372 JMYQ8N9B5 988 aa15.43■□□□□ 0.06
SNRNP200-206ENST00000484372 GRAPLQ8TC17 118 aaPredicted RBP15.43■□□□□ 0.06
SNRNP200-206ENST00000484372 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 ATP5J2-PTCD1G3V325 749 aa15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 ELL2O00472 640 aaPredicted RBP15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 DDX58O95786 925 aaKnown RBP15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 MPNDQ8N594 471 aa15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 ISCA1Q9BUE6 129 aa15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 SNED1Q8TER0 1413 aa15.42■□□□□ 0.06
SNRNP200-206ENST00000484372 ANP32CO43423 234 aa15.41■□□□□ 0.06
SNRNP200-206ENST00000484372 POTEIP0CG38 1075 aa15.41■□□□□ 0.06
SNRNP200-206ENST00000484372 POTEJP0CG39 1038 aa15.41■□□□□ 0.06
SNRNP200-206ENST00000484372 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
SNRNP200-206ENST00000484372 IFFO2Q5TF58 517 aa15.41■□□□□ 0.06
SNRNP200-206ENST00000484372 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
SNRNP200-206ENST00000484372 RTFDC1Q9BY42 306 aaPredicted RBP15.4■□□□□ 0.06
SNRNP200-206ENST00000484372 SF3B3Q15393 1217 aaKnown RBP15.39■□□□□ 0.05
SNRNP200-206ENST00000484372 AOC3Q16853 763 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms