RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 TNRC6CQ9HCJ0 1690 aaKnown RBP28.49■■■□□ 2.15
CNTNAP3B-208ENST00000484254 VAMP4O75379 141 aa28.49■■■□□ 2.15
CNTNAP3B-208ENST00000484254 RIC3Q7Z5B4 369 aa28.49■■■□□ 2.15
CNTNAP3B-208ENST00000484254 ZNF784Q8NCA9 323 aaPredicted RBP28.49■■■□□ 2.15
CNTNAP3B-208ENST00000484254 ISCA1Q9BUE6 129 aa28.49■■■□□ 2.15
CNTNAP3B-208ENST00000484254 ARFGEF2Q9Y6D5 1785 aa28.49■■■□□ 2.15
CNTNAP3B-208ENST00000484254 TCERG1O14776 1098 aaKnown RBP28.48■■■□□ 2.15
CNTNAP3B-208ENST00000484254 CRY2Q49AN0 593 aa28.48■■■□□ 2.15
CNTNAP3B-208ENST00000484254 DDX58O95786 925 aaKnown RBP28.47■■■□□ 2.15
CNTNAP3B-208ENST00000484254 SLC10A5Q5PT55 438 aa28.47■■■□□ 2.15
CNTNAP3B-208ENST00000484254 PRPF40BQ6NWY9 871 aaKnown RBP28.46■■■□□ 2.15
CNTNAP3B-208ENST00000484254 ADCY9O60503 1353 aa28.46■■■□□ 2.15
CNTNAP3B-208ENST00000484254 ATP5J2-PTCD1G3V325 749 aa28.45■■■□□ 2.14
CNTNAP3B-208ENST00000484254 SLC4A2P04920 1241 aa28.45■■■□□ 2.14
CNTNAP3B-208ENST00000484254 TRIM28Q13263 835 aaKnown RBP28.45■■■□□ 2.14
CNTNAP3B-208ENST00000484254 TRMT112Q9UI30 125 aaKnown RBP28.45■■■□□ 2.14
CNTNAP3B-208ENST00000484254 SLX4Q8IY92 1834 aa28.45■■■□□ 2.14
CNTNAP3B-208ENST00000484254 C21orf2O43822 256 aa28.44■■■□□ 2.14
CNTNAP3B-208ENST00000484254 SH3TC1Q8TE82 1336 aa28.43■■■□□ 2.14
CNTNAP3B-208ENST00000484254 CACNA1SQ13698 1873 aa28.43■■■□□ 2.14
CNTNAP3B-208ENST00000484254 ZNF219Q9P2Y4 722 aaPredicted RBP28.43■■■□□ 2.14
CNTNAP3B-208ENST00000484254 E9PSI1 815 aa28.42■■■□□ 2.14
CNTNAP3B-208ENST00000484254 ALDH1B1P30837 517 aa28.42■■■□□ 2.14
CNTNAP3B-208ENST00000484254 G2E3Q7L622 706 aa28.42■■■□□ 2.14
CNTNAP3B-208ENST00000484254 NLRP3Q96P20 1036 aa28.42■■■□□ 2.14
CNTNAP3B-208ENST00000484254 HOXA10P31260 410 aaPredicted RBP28.41■■■□□ 2.14
CNTNAP3B-208ENST00000484254 KSR2Q6VAB6 950 aa28.41■■■□□ 2.14
CNTNAP3B-208ENST00000484254 C3orf67Q6ZVT6 689 aa28.41■■■□□ 2.14
CNTNAP3B-208ENST00000484254 SYNE4Q8N205 404 aa28.41■■■□□ 2.14
CNTNAP3B-208ENST00000484254 RPGRQ92834 1020 aaKnown RBP28.41■■■□□ 2.14
CNTNAP3B-208ENST00000484254 METTL22Q9BUU2 404 aaPredicted RBP28.41■■■□□ 2.14
CNTNAP3B-208ENST00000484254 CACNA1FO60840 1977 aa28.41■■■□□ 2.14
CNTNAP3B-208ENST00000484254 SOGA3Q5TF21 947 aa28.4■■■□□ 2.14
CNTNAP3B-208ENST00000484254 C9orf131Q5VYM1 1079 aa28.4■■■□□ 2.14
CNTNAP3B-208ENST00000484254 C7orf43Q8WVR3 580 aa28.4■■■□□ 2.14
CNTNAP3B-208ENST00000484254 MYD88Q99836 296 aa28.4■■■□□ 2.14
CNTNAP3B-208ENST00000484254 MAP3K2Q9Y2U5 619 aa28.4■■■□□ 2.14
CNTNAP3B-208ENST00000484254 PI4KAP2A4QPH2 592 aa28.39■■■□□ 2.14
CNTNAP3B-208ENST00000484254 RASSF7Q02833 373 aa28.39■■■□□ 2.14
CNTNAP3B-208ENST00000484254 SLFN5Q08AF3 891 aa28.39■■■□□ 2.14
CNTNAP3B-208ENST00000484254 PI4KAP1Q8N8J0 262 aa28.39■■■□□ 2.14
CNTNAP3B-208ENST00000484254 ZNF428Q96B54 188 aa28.39■■■□□ 2.14
CNTNAP3B-208ENST00000484254 SBF1O95248 1867 aa28.38■■■□□ 2.13
CNTNAP3B-208ENST00000484254 NFKBIEO00221 500 aa28.38■■■□□ 2.13
CNTNAP3B-208ENST00000484254 HCLS1P14317 486 aaPredicted RBP28.38■■■□□ 2.13
CNTNAP3B-208ENST00000484254 FLIIQ13045 1269 aa28.38■■■□□ 2.13
CNTNAP3B-208ENST00000484254 RBM17Q96I25 401 aaKnown RBP28.38■■■□□ 2.13
CNTNAP3B-208ENST00000484254 CCDC191Q8NCU4 936 aa28.37■■■□□ 2.13
CNTNAP3B-208ENST00000484254 FAM89AQ96GI7 184 aa28.37■■■□□ 2.13
CNTNAP3B-208ENST00000484254 CRAMP1Q96RY5 1269 aa28.37■■■□□ 2.13
CNTNAP3B-208ENST00000484254 FER1L6Q2WGJ9 1857 aa28.36■■■□□ 2.13
CNTNAP3B-208ENST00000484254 RNF181Q9P0P0 153 aa28.36■■■□□ 2.13
CNTNAP3B-208ENST00000484254 LMNB1P20700 586 aa28.35■■■□□ 2.13
CNTNAP3B-208ENST00000484254 LAMB2P55268 1798 aa28.34■■■□□ 2.13
CNTNAP3B-208ENST00000484254 PRELPP51888 382 aa28.34■■■□□ 2.13
CNTNAP3B-208ENST00000484254 CCDC93Q567U6 631 aa28.34■■■□□ 2.13
CNTNAP3B-208ENST00000484254 CDCA7LQ96GN5 454 aa28.34■■■□□ 2.13
CNTNAP3B-208ENST00000484254 CWC25Q9NXE8 425 aaPredicted RBP28.34■■■□□ 2.13
CNTNAP3B-208ENST00000484254 LTBP3Q9NS15 1303 aa28.34■■■□□ 2.13
CNTNAP3B-208ENST00000484254 DDX60Q8IY21 1712 aaKnown RBP28.33■■■□□ 2.13
CNTNAP3B-208ENST00000484254 FKBP5Q13451 457 aaPredicted RBP28.33■■■□□ 2.13
CNTNAP3B-208ENST00000484254 ZBTB38Q8NAP3 1195 aaPredicted RBP28.33■■■□□ 2.13
CNTNAP3B-208ENST00000484254 NEXNQ0ZGT2 675 aa28.32■■■□□ 2.12
CNTNAP3B-208ENST00000484254 TRMT2AQ8IZ69 625 aaKnown RBP28.32■■■□□ 2.12
CNTNAP3B-208ENST00000484254 TAOK3Q9H2K8 898 aa28.32■■■□□ 2.12
CNTNAP3B-208ENST00000484254 IRS4O14654 1257 aaPredicted RBP28.31■■■□□ 2.12
CNTNAP3B-208ENST00000484254 IGKV5-2P06315 115 aa28.31■■■□□ 2.12
CNTNAP3B-208ENST00000484254 RTL5Q5HYW3 569 aaPredicted RBP28.31■■■□□ 2.12
CNTNAP3B-208ENST00000484254 PCCAP05165 728 aaPredicted RBP28.3■■■□□ 2.12
CNTNAP3B-208ENST00000484254 OLFM4Q6UX06 510 aa28.3■■■□□ 2.12
CNTNAP3B-208ENST00000484254 ABCC4O15439 1325 aa28.29■■■□□ 2.12
CNTNAP3B-208ENST00000484254 RTKN2Q8IZC4 609 aa28.29■■■□□ 2.12
CNTNAP3B-208ENST00000484254 DNAAF4Q8WXU2 420 aa28.29■■■□□ 2.12
CNTNAP3B-208ENST00000484254 CCDC88AQ3V6T2 1871 aa28.28■■■□□ 2.12
CNTNAP3B-208ENST00000484254 PPEF1O14829 653 aaPredicted RBP28.28■■■□□ 2.12
CNTNAP3B-208ENST00000484254 HSP90B1P14625 803 aaKnown RBP28.28■■■□□ 2.12
CNTNAP3B-208ENST00000484254 SF3B3Q15393 1217 aaKnown RBP28.28■■■□□ 2.12
CNTNAP3B-208ENST00000484254 CC2D2BQ6DHV5 1058 aa28.28■■■□□ 2.12
CNTNAP3B-208ENST00000484254 ZNF526Q8TF50 670 aaPredicted RBP28.28■■■□□ 2.12
CNTNAP3B-208ENST00000484254 GPBP1L1Q9HC44 474 aaPredicted RBP28.28■■■□□ 2.12
CNTNAP3B-208ENST00000484254 ZC3H4Q9UPT8 1303 aaKnown RBP28.27■■■□□ 2.12
CNTNAP3B-208ENST00000484254 NEURL1BA8MQ27 555 aa28.27■■■□□ 2.12
CNTNAP3B-208ENST00000484254 DDX46Q7L014 1031 aaKnown RBP28.27■■■□□ 2.12
CNTNAP3B-208ENST00000484254 FKBP4Q02790 459 aaKnown RBP eCLIP28.26■■■□□ 2.11
CNTNAP3B-208ENST00000484254 CWF19L2Q2TBE0 894 aaKnown RBP28.26■■■□□ 2.11
CNTNAP3B-208ENST00000484254 SNED1Q8TER0 1413 aa28.26■■■□□ 2.11
CNTNAP3B-208ENST00000484254 BBOX1O75936 387 aa28.25■■■□□ 2.11
CNTNAP3B-208ENST00000484254 CDHR2Q9BYE9 1310 aa28.24■■■□□ 2.11
CNTNAP3B-208ENST00000484254 GRAPQ13588 217 aa28.24■■■□□ 2.11
CNTNAP3B-208ENST00000484254 GRIPAP1Q4V328 841 aa28.24■■■□□ 2.11
CNTNAP3B-208ENST00000484254 LINS1Q8NG48 757 aa28.24■■■□□ 2.11
CNTNAP3B-208ENST00000484254 GRAPLQ8TC17 118 aaPredicted RBP28.24■■■□□ 2.11
CNTNAP3B-208ENST00000484254 JARID2Q92833 1246 aaPredicted RBP28.24■■■□□ 2.11
CNTNAP3B-208ENST00000484254 ATP6V0A2Q9Y487 856 aa28.23■■■□□ 2.11
CNTNAP3B-208ENST00000484254 DICER1Q9UPY3 1922 aaKnown RBP28.23■■■□□ 2.11
CNTNAP3B-208ENST00000484254 PDE8AO60658 829 aa28.22■■■□□ 2.11
CNTNAP3B-208ENST00000484254 TIAM2Q8IVF5 1701 aa28.22■■■□□ 2.11
CNTNAP3B-208ENST00000484254 MRPL50Q8N5N7 158 aaKnown RBP28.22■■■□□ 2.11
CNTNAP3B-208ENST00000484254 PSMD1Q99460 953 aa28.22■■■□□ 2.11
CNTNAP3B-208ENST00000484254 F6X3S4 739 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms