RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 NDUFB9Q9Y6M9 179 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 WASF2Q9Y6W5 498 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 ADGRB1O14514 1584 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 PRR36Q9H6K5 1346 aa8.82□□□□□ -1
SEMA3D-204ENST00000484038 PHRF1Q9P1Y6 1649 aaKnown RBP8.82□□□□□ -1
SEMA3D-204ENST00000484038 KIAA0232Q92628 1395 aa8.81□□□□□ -1
SEMA3D-204ENST00000484038 USP35Q9P2H5 1018 aa8.81□□□□□ -1
SEMA3D-204ENST00000484038 ITSN1Q15811 1721 aa8.81□□□□□ -1
SEMA3D-204ENST00000484038 CHRNA2Q15822 529 aa8.8□□□□□ -1
SEMA3D-204ENST00000484038 C4orf48Q5BLP8 95 aa8.8□□□□□ -1
SEMA3D-204ENST00000484038 SH3BP5LQ7L8J4 393 aa8.8□□□□□ -1
SEMA3D-204ENST00000484038 SPATA31A1Q5TZJ5 1347 aa8.8□□□□□ -1
SEMA3D-204ENST00000484038 J3QL48 77 aa8.8□□□□□ -1
SEMA3D-204ENST00000484038 WASLO00401 505 aaPredicted RBP8.8□□□□□ -1
SEMA3D-204ENST00000484038 APBA3O96018 575 aa8.8□□□□□ -1
SEMA3D-204ENST00000484038 FAM196AQ6ZSG2 479 aa8.8□□□□□ -1
SEMA3D-204ENST00000484038 RREB1Q92766 1687 aa8.79□□□□□ -1
SEMA3D-204ENST00000484038 NUP188Q5SRE5 1749 aa8.79□□□□□ -1
SEMA3D-204ENST00000484038 ZC3H6P61129 1189 aaKnown RBP8.79□□□□□ -1
SEMA3D-204ENST00000484038 MCM6Q14566 821 aa8.79□□□□□ -1
SEMA3D-204ENST00000484038 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
SEMA3D-204ENST00000484038 SH3RF1Q7Z6J0 888 aa8.79□□□□□ -1
SEMA3D-204ENST00000484038 CAMKK2Q96RR4 588 aa8.79□□□□□ -1
SEMA3D-204ENST00000484038 PARD3Q8TEW0 1356 aa8.78□□□□□ -1
SEMA3D-204ENST00000484038 ATP7BP35670 1465 aa8.78□□□□□ -1
SEMA3D-204ENST00000484038 SIAH2O43255 324 aa8.78□□□□□ -1
SEMA3D-204ENST00000484038 DGAT1O75907 488 aa8.78□□□□□ -1
SEMA3D-204ENST00000484038 PDE3BQ13370 1112 aa8.78□□□□□ -1
SEMA3D-204ENST00000484038 SLC10A4Q96EP9 437 aa8.78□□□□□ -1
SEMA3D-204ENST00000484038 ARHGEF28Q8N1W1 1705 aaKnown RBP8.78□□□□□ -1
SEMA3D-204ENST00000484038 SMPD1P17405 629 aa8.77□□□□□ -1.01
SEMA3D-204ENST00000484038 YY1P25490 414 aa8.77□□□□□ -1.01
SEMA3D-204ENST00000484038 EVA1CP58658 441 aa8.77□□□□□ -1.01
SEMA3D-204ENST00000484038 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
SEMA3D-204ENST00000484038 SSH2Q76I76 1423 aa8.77□□□□□ -1.01
SEMA3D-204ENST00000484038 NRKQ7Z2Y5 1582 aa8.76□□□□□ -1.01
SEMA3D-204ENST00000484038 ERFEQ4G0M1 354 aa8.76□□□□□ -1.01
SEMA3D-204ENST00000484038 VASH1Q7L8A9 365 aaPredicted RBP8.76□□□□□ -1.01
SEMA3D-204ENST00000484038 DCAF11Q8TEB1 546 aa8.76□□□□□ -1.01
SEMA3D-204ENST00000484038 PPP1R1BQ9UD71 204 aaPredicted RBP8.76□□□□□ -1.01
SEMA3D-204ENST00000484038 GPSM3Q9Y4H4 160 aa8.76□□□□□ -1.01
SEMA3D-204ENST00000484038 ABL2P42684 1182 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 FLIIQ13045 1269 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 NBPF8Q3BBV2 869 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 ADAM32Q8TC27 787 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 NUDT16Q96DE0 195 aaKnown RBP8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 TOPAZ1Q8N9V7 1692 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 ZBBXA8MT70 800 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 ADH1CP00326 375 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 DZIP3Q86Y13 1208 aaKnown RBP8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 C1QTNF2Q9BXJ5 285 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 GDPD2Q9HCC8 539 aa8.75□□□□□ -1.01
SEMA3D-204ENST00000484038 CAMTA1Q9Y6Y1 1673 aa8.74□□□□□ -1.01
SEMA3D-204ENST00000484038 LMO7Q8WWI1 1683 aa8.74□□□□□ -1.01
SEMA3D-204ENST00000484038 RAB3GAP2Q9H2M9 1393 aa8.74□□□□□ -1.01
SEMA3D-204ENST00000484038 FSHRP23945 695 aa8.74□□□□□ -1.01
SEMA3D-204ENST00000484038 TCP11L2Q8N4U5 519 aa8.74□□□□□ -1.01
SEMA3D-204ENST00000484038 ABTB2Q8N961 1025 aa8.74□□□□□ -1.01
SEMA3D-204ENST00000484038 ACEP12821 1306 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 FBXO45P0C2W1 286 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 NNTQ13423 1086 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 TRAF7Q6Q0C0 670 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 TRMT44Q8IYL2 757 aaKnown RBP8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 HPS1Q92902 700 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 OCSTAMPQ9BR26 566 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 CDK19Q9BWU1 502 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 SPON1Q9HCB6 807 aa8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 PARP4Q9UKK3 1724 aaKnown RBP8.73□□□□□ -1.01
SEMA3D-204ENST00000484038 POLR3AO14802 1390 aaPredicted RBP8.72□□□□□ -1.01
SEMA3D-204ENST00000484038 CPDO75976 1380 aa8.72□□□□□ -1.01
SEMA3D-204ENST00000484038 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
SEMA3D-204ENST00000484038 CDK15Q96Q40 435 aa8.72□□□□□ -1.01
SEMA3D-204ENST00000484038 ZNF330Q9Y3S2 320 aaPredicted RBP8.72□□□□□ -1.01
SEMA3D-204ENST00000484038 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
SEMA3D-204ENST00000484038 COL5A2P05997 1499 aaPredicted RBP8.72□□□□□ -1.01
SEMA3D-204ENST00000484038 OVOS2A0A0G2JMS6 1433 aa8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 NINLQ9Y2I6 1382 aa8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 KCNQ2O43526 872 aa8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 RAD21O60216 631 aa8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 MPNDQ8N594 471 aa8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 CDV3Q9UKY7 258 aaKnown RBP8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 THRAP3Q9Y2W1 955 aaKnown RBP8.71□□□□□ -1.01
SEMA3D-204ENST00000484038 LRRC37A3O60309 1634 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 USP19O94966 1318 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 AXIN1O15169 862 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 ST8SIA5O15466 376 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 RAB15P59190 212 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 NR1H3Q13133 447 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 NBPF20Q3BBV1 942 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 MAP4K5Q9Y4K4 846 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 RGPD3A6NKT7 1758 aaPredicted RBP8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 RGPD4Q7Z3J3 1758 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 CRB1P82279 1406 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 NR5A1Q13285 461 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 KCTD15Q96SI1 283 aaPredicted RBP8.7□□□□□ -1.02
SEMA3D-204ENST00000484038 PEAK1Q9H792 1746 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms