RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 AOC2O75106 756 aa14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 SNRPA1P09661 255 aaKnown RBP14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 LMOD1P29536 600 aaPredicted RBP14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 PRKAR2BP31323 418 aa14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 EIF6P56537 245 aaKnown RBP14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 CRY2Q49AN0 593 aa14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 PCGF6Q9BYE7 350 aa14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 CLSPNQ9HAW4 1339 aa14.62□□□□□ -0.07
SMARCC1-205ENST00000483847 GTF2E1P29083 439 aaPredicted RBP14.61□□□□□ -0.07
SMARCC1-205ENST00000483847 ECE1P42892 770 aa14.61□□□□□ -0.07
SMARCC1-205ENST00000483847 MCM10Q7L590 875 aa14.61□□□□□ -0.07
SMARCC1-205ENST00000483847 NUTM1Q86Y26 1132 aa14.61□□□□□ -0.07
SMARCC1-205ENST00000483847 BEGAINQ9BUH8 593 aa14.61□□□□□ -0.07
SMARCC1-205ENST00000483847 RSPH6AQ9H0K4 717 aa14.61□□□□□ -0.07
SMARCC1-205ENST00000483847 TLL2Q9Y6L7 1015 aa14.61□□□□□ -0.07
SMARCC1-205ENST00000483847 RGL2O15211 777 aa14.6□□□□□ -0.07
SMARCC1-205ENST00000483847 DCTN1Q14203 1278 aa14.59□□□□□ -0.07
SMARCC1-205ENST00000483847 USP50Q70EL3 339 aaPredicted RBP14.59□□□□□ -0.07
SMARCC1-205ENST00000483847 LARGE2Q8N3Y3 721 aa14.59□□□□□ -0.07
SMARCC1-205ENST00000483847 NUP98P52948 1817 aa14.58□□□□□ -0.08
SMARCC1-205ENST00000483847 TCERG1O14776 1098 aaKnown RBP14.58□□□□□ -0.08
SMARCC1-205ENST00000483847 CC2D2BQ6DHV5 1058 aa14.58□□□□□ -0.08
SMARCC1-205ENST00000483847 MCOLN1Q9GZU1 580 aa14.58□□□□□ -0.08
SMARCC1-205ENST00000483847 CASP8AP2Q9UKL3 1982 aa14.58□□□□□ -0.08
SMARCC1-205ENST00000483847 LAMB4A4D0S4 1761 aa14.57□□□□□ -0.08
SMARCC1-205ENST00000483847 HOXA10P31260 410 aaPredicted RBP14.57□□□□□ -0.08
SMARCC1-205ENST00000483847 MAP2K2P36507 400 aa14.57□□□□□ -0.08
SMARCC1-205ENST00000483847 SAPCD2Q86UD0 394 aa14.57□□□□□ -0.08
SMARCC1-205ENST00000483847 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
SMARCC1-205ENST00000483847 RPGRQ92834 1020 aaKnown RBP14.57□□□□□ -0.08
SMARCC1-205ENST00000483847 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
SMARCC1-205ENST00000483847 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
SMARCC1-205ENST00000483847 GLIS2Q9BZE0 524 aaPredicted RBP14.56□□□□□ -0.08
SMARCC1-205ENST00000483847 NYXQ9GZU5 481 aa14.56□□□□□ -0.08
SMARCC1-205ENST00000483847 MIS18AQ9NYP9 233 aa14.56□□□□□ -0.08
SMARCC1-205ENST00000483847 GPRC5DQ9NZD1 345 aa14.56□□□□□ -0.08
SMARCC1-205ENST00000483847 UBN2Q6ZU65 1347 aa14.56□□□□□ -0.08
SMARCC1-205ENST00000483847 RIC1Q4ADV7 1423 aa14.56□□□□□ -0.08
SMARCC1-205ENST00000483847 PPEF1O14829 653 aaPredicted RBP14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 CELF2O95319 508 aaKnown RBP14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 GPTP24298 496 aa14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 AOC3Q16853 763 aa14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 NIM1KQ8IY84 436 aa14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 RTF1Q92541 710 aaKnown RBP14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 ADARB2Q9NS39 739 aaKnown RBP14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 NPC1L1Q9UHC9 1359 aa14.55□□□□□ -0.08
SMARCC1-205ENST00000483847 PPIP5K2O43314 1243 aa14.54□□□□□ -0.08
SMARCC1-205ENST00000483847 CXCL9Q07325 125 aa14.54□□□□□ -0.08
SMARCC1-205ENST00000483847 SUSD4Q5VX71 490 aa14.54□□□□□ -0.08
SMARCC1-205ENST00000483847 CRAMP1Q96RY5 1269 aa14.54□□□□□ -0.08
SMARCC1-205ENST00000483847 MAP3K15Q6ZN16 1313 aa14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 ERVV-1B6SEH8 477 aa14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 BRPF1P55201 1214 aaPredicted RBP14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 DGKZQ13574 1117 aa14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 CIAPIN1Q6FI81 312 aa14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 ZIC5Q96T25 663 aa14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 PCDH10Q9P2E7 1040 aa14.53□□□□□ -0.08
SMARCC1-205ENST00000483847 IBTKQ9P2D0 1353 aaPredicted RBP14.52□□□□□ -0.08
SMARCC1-205ENST00000483847 CA12O43570 354 aa14.52□□□□□ -0.09
SMARCC1-205ENST00000483847 GMPSP49915 693 aaPredicted RBP14.52□□□□□ -0.09
SMARCC1-205ENST00000483847 RBM17Q96I25 401 aaKnown RBP14.52□□□□□ -0.09
SMARCC1-205ENST00000483847 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.09
SMARCC1-205ENST00000483847 ZNF408Q9H9D4 720 aa14.52□□□□□ -0.09
SMARCC1-205ENST00000483847 RRP7AQ9Y3A4 280 aaKnown RBP14.52□□□□□ -0.09
SMARCC1-205ENST00000483847 PDE4DIPQ5VU43 2346 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 NTSR2O95665 410 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 U2AF1L5P0DN76 240 aaPredicted RBP14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 MYL6BP14649 208 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 HIRAP54198 1017 aaPredicted RBP14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 U2AF1Q01081 240 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 TAF7Q15545 349 aaPredicted RBP14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 DLK2Q6UY11 383 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 HHIPL1Q96JK4 782 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 PGAP2Q9UHJ9 254 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 ZNRF3Q9ULT6 936 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 KDM3BQ7LBC6 1761 aa14.51□□□□□ -0.09
SMARCC1-205ENST00000483847 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
SMARCC1-205ENST00000483847 KIF6Q6ZMV9 814 aa14.5□□□□□ -0.09
SMARCC1-205ENST00000483847 ZNF34Q8IZ26 560 aa14.5□□□□□ -0.09
SMARCC1-205ENST00000483847 TRPM4Q8TD43 1214 aa14.5□□□□□ -0.09
SMARCC1-205ENST00000483847 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
SMARCC1-205ENST00000483847 ATP6V0A2Q9Y487 856 aa14.5□□□□□ -0.09
SMARCC1-205ENST00000483847 HTATSF1O43719 755 aaKnown RBP14.49□□□□□ -0.09
SMARCC1-205ENST00000483847 ABCC4O15439 1325 aa14.48□□□□□ -0.09
SMARCC1-205ENST00000483847 RAD17O75943 681 aa14.48□□□□□ -0.09
SMARCC1-205ENST00000483847 RTFDC1Q9BY42 306 aaPredicted RBP14.48□□□□□ -0.09
SMARCC1-205ENST00000483847 NUDCQ9Y266 331 aa14.48□□□□□ -0.09
SMARCC1-205ENST00000483847 LAMB2P55268 1798 aa14.47□□□□□ -0.09
SMARCC1-205ENST00000483847 DLG5Q8TDM6 1919 aa14.47□□□□□ -0.09
SMARCC1-205ENST00000483847 BCL2L13Q9BXK5 485 aa14.47□□□□□ -0.09
SMARCC1-205ENST00000483847 VPS33BQ9H267 617 aa14.47□□□□□ -0.09
SMARCC1-205ENST00000483847 SOX10P56693 466 aa14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 HUNKP57058 714 aa14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 EIF4A1P60842 406 aaKnown RBP14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 NOGQ13253 232 aa14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 GIGYF2Q6Y7W6 1299 aaKnown RBP14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 CDC37L1Q7L3B6 337 aa14.46□□□□□ -0.09
SMARCC1-205ENST00000483847 USP48Q86UV5 1035 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms