RNA–Protein interactions for RNA: ENST00000483560.1

SNX12-204, Transcript of sorting nexin 12, humanhuman

TSL 5

Gene SNX12, Length 700 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-204ENST00000483560 NEFMP07197 916 aa8.72□□□□□ -1.01
SNX12-204ENST00000483560 HMOX1P09601 288 aa8.72□□□□□ -1.01
SNX12-204ENST00000483560 NUDCQ9Y266 331 aa8.72□□□□□ -1.01
SNX12-204ENST00000483560 MEGF6O75095 1541 aa8.71□□□□□ -1.01
SNX12-204ENST00000483560 PHKG2P15735 406 aa8.71□□□□□ -1.02
SNX12-204ENST00000483560 MTFR1LQ9H019 292 aa8.71□□□□□ -1.02
SNX12-204ENST00000483560 RREB1Q92766 1687 aa8.71□□□□□ -1.02
SNX12-204ENST00000483560 PTPN5P54829 565 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 ZNF827Q17R98 1081 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 AEBP1Q8IUX7 1158 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 PIGBQ92521 554 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 DDRGK1Q96HY6 314 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 DCAF5Q96JK2 942 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 LRRC4BQ9NT99 713 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 PALLDQ8WX93 1383 aa8.7□□□□□ -1.02
SNX12-204ENST00000483560 CRYBG1Q9Y4K1 1723 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
SNX12-204ENST00000483560 CFHP08603 1231 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 U2AF1L5P0DN76 240 aaPredicted RBP8.69□□□□□ -1.02
SNX12-204ENST00000483560 ATP6V1AP38606 617 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 GCGRP47871 477 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 U2AF1Q01081 240 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNX12-204ENST00000483560 KMT5BQ4FZB7 885 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 FLAD1Q8NFF5 587 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
SNX12-204ENST00000483560 MON2Q7Z3U7 1717 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 ERVV-2B6SEH9 535 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 IL13P35225 146 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 MSL1Q68DK7 614 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
SNX12-204ENST00000483560 FAM117AQ9C073 453 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 ASAP1Q9ULH1 1129 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 IGSF1Q8N6C5 1336 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 MYOM1P52179 1685 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 CHD4Q14839 1912 aa8.68□□□□□ -1.02
SNX12-204ENST00000483560 LOC102724428A0A0B4J2F2 783 aa8.67□□□□□ -1.02
SNX12-204ENST00000483560 SIK1P57059 783 aa8.67□□□□□ -1.02
SNX12-204ENST00000483560 AKAP12Q02952 1782 aa8.67□□□□□ -1.02
SNX12-204ENST00000483560 SLC16A10Q8TF71 515 aa8.67□□□□□ -1.02
SNX12-204ENST00000483560 RTF1Q92541 710 aaKnown RBP8.67□□□□□ -1.02
SNX12-204ENST00000483560 LRRC37A3O60309 1634 aa8.66□□□□□ -1.02
SNX12-204ENST00000483560 PER1O15534 1290 aaPredicted RBP8.66□□□□□ -1.02
SNX12-204ENST00000483560 TEFQ10587 303 aa8.66□□□□□ -1.02
SNX12-204ENST00000483560 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
SNX12-204ENST00000483560 AKAP4Q5JQC9 854 aa8.66□□□□□ -1.02
SNX12-204ENST00000483560 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
SNX12-204ENST00000483560 TTC5Q8N0Z6 440 aa8.66□□□□□ -1.02
SNX12-204ENST00000483560 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
SNX12-204ENST00000483560 ACTN4O43707 911 aaKnown RBP8.65□□□□□ -1.02
SNX12-204ENST00000483560 KDM4AO75164 1064 aa8.65□□□□□ -1.02
SNX12-204ENST00000483560 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
SNX12-204ENST00000483560 APLP1P51693 650 aa8.65□□□□□ -1.02
SNX12-204ENST00000483560 DDX10Q13206 875 aaKnown RBP8.65□□□□□ -1.02
SNX12-204ENST00000483560 IL27Q8NEV9 243 aa8.65□□□□□ -1.02
SNX12-204ENST00000483560 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
SNX12-204ENST00000483560 ATG3Q9NT62 314 aa8.65□□□□□ -1.02
SNX12-204ENST00000483560 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
SNX12-204ENST00000483560 COL18A1P39060 1754 aa8.64□□□□□ -1.03
SNX12-204ENST00000483560 PNPLA7Q6ZV29 1317 aa8.64□□□□□ -1.03
SNX12-204ENST00000483560 PARP4Q9UKK3 1724 aaKnown RBP8.64□□□□□ -1.03
SNX12-204ENST00000483560 PPP2R1AP30153 589 aa8.64□□□□□ -1.03
SNX12-204ENST00000483560 RFC4P35249 363 aa8.64□□□□□ -1.03
SNX12-204ENST00000483560 USP46P62068 366 aa8.64□□□□□ -1.03
SNX12-204ENST00000483560 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
SNX12-204ENST00000483560 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
SNX12-204ENST00000483560 CASZ1Q86V15 1759 aa8.63□□□□□ -1.03
SNX12-204ENST00000483560 HSPA6P17066 643 aa8.63□□□□□ -1.03
SNX12-204ENST00000483560 PRKAR2BP31323 418 aa8.63□□□□□ -1.03
SNX12-204ENST00000483560 MTHFSDQ2M296 383 aaKnown RBP8.63□□□□□ -1.03
SNX12-204ENST00000483560 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
SNX12-204ENST00000483560 COL23A1Q86Y22 540 aaPredicted RBP8.63□□□□□ -1.03
SNX12-204ENST00000483560 LINC00116Q8NCU8 138 aa8.63□□□□□ -1.03
SNX12-204ENST00000483560 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
SNX12-204ENST00000483560 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
SNX12-204ENST00000483560 PNNQ9H307 717 aaKnown RBP8.63□□□□□ -1.03
SNX12-204ENST00000483560 ZNF330Q9Y3S2 320 aaPredicted RBP8.63□□□□□ -1.03
SNX12-204ENST00000483560 MAPK8IP3Q9UPT6 1336 aa8.62□□□□□ -1.03
SNX12-204ENST00000483560 GNAT3A8MTJ3 354 aa8.62□□□□□ -1.03
SNX12-204ENST00000483560 GRIN3BO60391 1043 aa8.62□□□□□ -1.03
SNX12-204ENST00000483560 FUT2Q10981 343 aa8.62□□□□□ -1.03
SNX12-204ENST00000483560 SMIM5Q71RC9 77 aa8.62□□□□□ -1.03
SNX12-204ENST00000483560 TBC1D2Q9BYX2 928 aa8.62□□□□□ -1.03
SNX12-204ENST00000483560 LGR6Q9HBX8 967 aa8.62□□□□□ -1.03
SNX12-204ENST00000483560 NPC1L1Q9UHC9 1359 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 NPHP1O15259 732 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 RNMTO43148 476 aaKnown RBP8.61□□□□□ -1.03
SNX12-204ENST00000483560 ZPR1O75312 459 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 SSFA2P28290 1259 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 SLC39A6Q13433 755 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 ITPK1Q13572 414 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 WDR43Q15061 677 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNX12-204ENST00000483560 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 PCDHB3Q9Y5E6 796 aa8.61□□□□□ -1.03
SNX12-204ENST00000483560 STARD3NLO95772 234 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms