RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 ZNF280CQ8ND82 737 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 ELOA3Q8NG57 546 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 FAM200AQ8TCP9 573 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 MDFIQ99750 246 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 ZMYND15Q9H091 742 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 EFCC1Q9HA90 598 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 KCNH4Q9UQ05 1017 aa7.78□□□□□ -1.16
NSMCE4A-210ENST00000483541 RFX1P22670 979 aa7.77□□□□□ -1.17
NSMCE4A-210ENST00000483541 SPEM2Q0P670 501 aa7.77□□□□□ -1.17
NSMCE4A-210ENST00000483541 BTLAQ7Z6A9 289 aa7.77□□□□□ -1.17
NSMCE4A-210ENST00000483541 FOXO3O43524 673 aa7.76□□□□□ -1.17
NSMCE4A-210ENST00000483541 TNFRSF25Q93038 417 aa7.76□□□□□ -1.17
NSMCE4A-210ENST00000483541 SLC30A3Q99726 388 aa7.76□□□□□ -1.17
NSMCE4A-210ENST00000483541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
NSMCE4A-210ENST00000483541 NOP53Q9NZM5 478 aaKnown RBP7.76□□□□□ -1.17
NSMCE4A-210ENST00000483541 COL8A1P27658 744 aa7.75□□□□□ -1.17
NSMCE4A-210ENST00000483541 ELOAQ14241 798 aaKnown RBP7.75□□□□□ -1.17
NSMCE4A-210ENST00000483541 GRIN2CQ14957 1233 aa7.75□□□□□ -1.17
NSMCE4A-210ENST00000483541 NGLY1Q96IV0 654 aa7.75□□□□□ -1.17
NSMCE4A-210ENST00000483541 TGFBR3LH3BV60 316 aa7.74□□□□□ -1.17
NSMCE4A-210ENST00000483541 SWI5Q1ZZU3 235 aa7.74□□□□□ -1.17
NSMCE4A-210ENST00000483541 SRPK2P78362 688 aaKnown RBP7.73□□□□□ -1.17
NSMCE4A-210ENST00000483541 CDCA8Q53HL2 280 aa7.73□□□□□ -1.17
NSMCE4A-210ENST00000483541 SUV39H2Q9H5I1 410 aa7.73□□□□□ -1.17
NSMCE4A-210ENST00000483541 C11orf16Q9NQ32 467 aa7.73□□□□□ -1.17
NSMCE4A-210ENST00000483541 DMGDHQ9UI17 866 aaKnown RBP7.73□□□□□ -1.17
NSMCE4A-210ENST00000483541 NOVA2Q9UNW9 492 aaKnown RBP7.73□□□□□ -1.17
NSMCE4A-210ENST00000483541 ACIN1Q9UKV3 1341 aaKnown RBP7.73□□□□□ -1.17
NSMCE4A-210ENST00000483541 KRBA1A5PL33 1030 aa7.72□□□□□ -1.17
NSMCE4A-210ENST00000483541 LGR5O75473 907 aa7.72□□□□□ -1.17
NSMCE4A-210ENST00000483541 VTI1AQ96AJ9 217 aa7.72□□□□□ -1.17
NSMCE4A-210ENST00000483541 MYO19Q96H55 970 aa7.72□□□□□ -1.17
NSMCE4A-210ENST00000483541 PRDM6Q9NQX0 595 aa7.72□□□□□ -1.17
NSMCE4A-210ENST00000483541 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
NSMCE4A-210ENST00000483541 ATG7O95352 703 aa7.7□□□□□ -1.18
NSMCE4A-210ENST00000483541 EPB42P16452 691 aa7.7□□□□□ -1.18
NSMCE4A-210ENST00000483541 C11orf91Q3C1V1 193 aa7.7□□□□□ -1.18
NSMCE4A-210ENST00000483541 KRTAP1-3Q8IUG1 177 aa7.7□□□□□ -1.18
NSMCE4A-210ENST00000483541 GSX2Q9BZM3 304 aa7.7□□□□□ -1.18
NSMCE4A-210ENST00000483541 QTRT2Q9H974 415 aaKnown RBP7.7□□□□□ -1.18
NSMCE4A-210ENST00000483541 SPDYE3A6NKU9 549 aa7.69□□□□□ -1.18
NSMCE4A-210ENST00000483541 INPP5BP32019 993 aa7.69□□□□□ -1.18
NSMCE4A-210ENST00000483541 ADH7P40394 386 aa7.69□□□□□ -1.18
NSMCE4A-210ENST00000483541 BHMTQ93088 406 aa7.69□□□□□ -1.18
NSMCE4A-210ENST00000483541 TRIM11Q96F44 468 aa7.69□□□□□ -1.18
NSMCE4A-210ENST00000483541 STARD13Q9Y3M8 1113 aa7.69□□□□□ -1.18
NSMCE4A-210ENST00000483541 GTF3C3Q9Y5Q9 886 aa7.69□□□□□ -1.18
NSMCE4A-210ENST00000483541 FURINP09958 794 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 DGKZQ13574 1117 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 CCINQ13939 588 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 MICALL1Q8N3F8 863 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 PLVAPQ9BX97 442 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 KLK14Q9P0G3 267 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 SERPINA10Q9UK55 444 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 ZMIZ1Q9ULJ6 1067 aa7.68□□□□□ -1.18
NSMCE4A-210ENST00000483541 M0R082 166 aa7.67□□□□□ -1.18
NSMCE4A-210ENST00000483541 MICAL2O94851 1124 aa7.67□□□□□ -1.18
NSMCE4A-210ENST00000483541 IDH3AP50213 366 aa7.67□□□□□ -1.18
NSMCE4A-210ENST00000483541 C20orf204Q6ZNR8 217 aa7.67□□□□□ -1.18
NSMCE4A-210ENST00000483541 ZNF417Q8TAU3 575 aa7.67□□□□□ -1.18
NSMCE4A-210ENST00000483541 COL26A1Q96A83 441 aa7.67□□□□□ -1.18
NSMCE4A-210ENST00000483541 ZNF587Q96SQ5 575 aaPredicted RBP7.67□□□□□ -1.18
NSMCE4A-210ENST00000483541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 MAP3K6O95382 1288 aa7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 SPATA31C1P0DKV0 1188 aa7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 ARSDP51689 593 aa7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 FKBP5Q13451 457 aaPredicted RBP7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 COL9A3Q14050 684 aaPredicted RBP7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 PCSK7Q16549 785 aa7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 OCLNQ16625 522 aa7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 CCDC97Q96F63 343 aaPredicted RBP7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 IFT43Q96FT9 208 aa7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 PNMA5Q96PV4 448 aa7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.66□□□□□ -1.18
NSMCE4A-210ENST00000483541 PBXIP1Q96AQ6 731 aa7.65□□□□□ -1.18
NSMCE4A-210ENST00000483541 PRIMPOLQ96LW4 560 aa7.65□□□□□ -1.18
NSMCE4A-210ENST00000483541 LRFN2Q9ULH4 789 aa7.65□□□□□ -1.18
NSMCE4A-210ENST00000483541 C1QTNF9BB2RNN3 333 aa7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 OPLAHO14841 1288 aa7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 ALBP02768 609 aa7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 GRNP28799 593 aaKnown RBP7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 CD163Q86VB7 1156 aa7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 STK32AQ8WU08 396 aa7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 UBE2OQ9C0C9 1292 aaKnown RBP7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 SLC6A14Q9UN76 642 aa7.64□□□□□ -1.19
NSMCE4A-210ENST00000483541 PRMT3O60678 531 aa7.63□□□□□ -1.19
NSMCE4A-210ENST00000483541 LILRB5O75023 590 aa7.63□□□□□ -1.19
NSMCE4A-210ENST00000483541 EGFRP00533 1210 aa7.63□□□□□ -1.19
NSMCE4A-210ENST00000483541 NFKB1P19838 968 aa7.63□□□□□ -1.19
NSMCE4A-210ENST00000483541 PRRT3Q5FWE3 981 aa7.63□□□□□ -1.19
NSMCE4A-210ENST00000483541 COX20Q5RI15 118 aa7.63□□□□□ -1.19
NSMCE4A-210ENST00000483541 DNAJB12Q9NXW2 375 aaKnown RBP7.63□□□□□ -1.19
NSMCE4A-210ENST00000483541 NID1P14543 1247 aa7.62□□□□□ -1.19
NSMCE4A-210ENST00000483541 CLP1Q92989 425 aaKnown RBP7.62□□□□□ -1.19
NSMCE4A-210ENST00000483541 IGFLR1Q9H665 355 aa7.62□□□□□ -1.19
NSMCE4A-210ENST00000483541 CXXC1Q9P0U4 656 aaPredicted RBP7.62□□□□□ -1.19
NSMCE4A-210ENST00000483541 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms