RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 HSPA6P17066 643 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 GPTP24298 496 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
HMG20B-210ENST00000483417 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 COPS6Q7L5N1 327 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 RRAGCQ9HB90 399 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 DDX21Q9NR30 783 aaKnown RBP eCLIP12.4□□□□□ -0.42
HMG20B-210ENST00000483417 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
HMG20B-210ENST00000483417 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
HMG20B-210ENST00000483417 NTSR2O95665 410 aa12.39□□□□□ -0.43
HMG20B-210ENST00000483417 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
HMG20B-210ENST00000483417 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
HMG20B-210ENST00000483417 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
HMG20B-210ENST00000483417 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 RIC1Q4ADV7 1423 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 POTECB2RU33 542 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 HOXB7P09629 217 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 GTF2E1P29083 439 aaPredicted RBP12.38□□□□□ -0.43
HMG20B-210ENST00000483417 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 RBM46Q8TBY0 533 aaKnown RBP12.38□□□□□ -0.43
HMG20B-210ENST00000483417 XAGE3Q8WTP9 111 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
HMG20B-210ENST00000483417 TCIRG1Q13488 830 aa12.37□□□□□ -0.43
HMG20B-210ENST00000483417 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
HMG20B-210ENST00000483417 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
HMG20B-210ENST00000483417 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
HMG20B-210ENST00000483417 G2E3Q7L622 706 aa12.37□□□□□ -0.43
HMG20B-210ENST00000483417 PHAXQ9H814 394 aaKnown RBP12.37□□□□□ -0.43
HMG20B-210ENST00000483417 CHPF2Q9P2E5 772 aa12.37□□□□□ -0.43
HMG20B-210ENST00000483417 TNRC6CQ9HCJ0 1690 aaKnown RBP12.37□□□□□ -0.43
HMG20B-210ENST00000483417 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
HMG20B-210ENST00000483417 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
HMG20B-210ENST00000483417 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
HMG20B-210ENST00000483417 HDGFL1Q5TGJ6 251 aa12.36□□□□□ -0.43
HMG20B-210ENST00000483417 NLRP10Q86W26 655 aa12.36□□□□□ -0.43
HMG20B-210ENST00000483417 FKBP4Q02790 459 aaKnown RBP eCLIP12.35□□□□□ -0.43
HMG20B-210ENST00000483417 AIMP1Q12904 312 aaKnown RBP12.35□□□□□ -0.43
HMG20B-210ENST00000483417 PPP1R42Q7Z4L9 355 aa12.35□□□□□ -0.43
HMG20B-210ENST00000483417 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
HMG20B-210ENST00000483417 CRAMP1Q96RY5 1269 aa12.35□□□□□ -0.43
HMG20B-210ENST00000483417 UTP14AQ9BVJ6 771 aaKnown RBP12.35□□□□□ -0.43
HMG20B-210ENST00000483417 DBF4Q9UBU7 674 aaPredicted RBP12.35□□□□□ -0.43
HMG20B-210ENST00000483417 DICER1Q9UPY3 1922 aaKnown RBP12.35□□□□□ -0.43
HMG20B-210ENST00000483417 CACNA1SQ13698 1873 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 FSTL1Q12841 308 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 HSP90AB3PQ58FF7 597 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 ANKRD13DQ6ZTN6 518 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 DNAJC5GQ8N7S2 189 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 PLBD2Q8NHP8 589 aa12.34□□□□□ -0.43
HMG20B-210ENST00000483417 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 CC2D2BQ6DHV5 1058 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 NLRP3Q96P20 1036 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 BCL2L13Q9BXK5 485 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 TIAM2Q8IVF5 1701 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 RNF123Q5XPI4 1314 aa12.33□□□□□ -0.44
HMG20B-210ENST00000483417 WDR90Q96KV7 1748 aa12.32□□□□□ -0.44
HMG20B-210ENST00000483417 BCAR3O75815 825 aa12.32□□□□□ -0.44
HMG20B-210ENST00000483417 DDNO94850 711 aaPredicted RBP12.32□□□□□ -0.44
HMG20B-210ENST00000483417 APLP1P51693 650 aa12.32□□□□□ -0.44
HMG20B-210ENST00000483417 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
HMG20B-210ENST00000483417 SLC51AQ86UW1 340 aa12.32□□□□□ -0.44
HMG20B-210ENST00000483417 C16orf71Q8IYS4 520 aaPredicted RBP12.32□□□□□ -0.44
HMG20B-210ENST00000483417 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
HMG20B-210ENST00000483417 RPGRQ92834 1020 aaKnown RBP12.32□□□□□ -0.44
HMG20B-210ENST00000483417 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
HMG20B-210ENST00000483417 PSMD1Q99460 953 aa12.32□□□□□ -0.44
HMG20B-210ENST00000483417 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
HMG20B-210ENST00000483417 HYPKQ9NX55 129 aa12.32□□□□□ -0.44
HMG20B-210ENST00000483417 FZD9O00144 591 aa12.31□□□□□ -0.44
HMG20B-210ENST00000483417 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
HMG20B-210ENST00000483417 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
HMG20B-210ENST00000483417 CEP350Q5VT06 3117 aa12.31□□□□□ -0.44
HMG20B-210ENST00000483417 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
HMG20B-210ENST00000483417 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
HMG20B-210ENST00000483417 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
HMG20B-210ENST00000483417 GRIPAP1Q4V328 841 aa12.3□□□□□ -0.44
HMG20B-210ENST00000483417 SMC1BQ8NDV3 1235 aa12.3□□□□□ -0.44
HMG20B-210ENST00000483417 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
HMG20B-210ENST00000483417 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
HMG20B-210ENST00000483417 SH3TC1Q8TE82 1336 aa12.3□□□□□ -0.44
HMG20B-210ENST00000483417 ATP5J2-PTCD1G3V325 749 aa12.29□□□□□ -0.44
HMG20B-210ENST00000483417 BBOX1O75936 387 aa12.29□□□□□ -0.44
HMG20B-210ENST00000483417 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
HMG20B-210ENST00000483417 ABCC4O15439 1325 aa12.29□□□□□ -0.44
HMG20B-210ENST00000483417 PPEF1O14829 653 aaPredicted RBP12.28□□□□□ -0.44
HMG20B-210ENST00000483417 SF3B3Q15393 1217 aaKnown RBP12.28□□□□□ -0.44
HMG20B-210ENST00000483417 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
HMG20B-210ENST00000483417 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
HMG20B-210ENST00000483417 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
HMG20B-210ENST00000483417 ZNF541Q9H0D2 1346 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms