RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 NBPF6Q5VWK0 638 aa14.74□□□□□ -0.05
CCDC78-213ENST00000482878 GIMAP6Q6P9H5 292 aa14.74□□□□□ -0.05
CCDC78-213ENST00000482878 NBPF4Q96M43 638 aa14.74□□□□□ -0.05
CCDC78-213ENST00000482878 DNAJC2Q99543 621 aaKnown RBP14.74□□□□□ -0.05
CCDC78-213ENST00000482878 MTMR6Q9Y217 621 aa14.74□□□□□ -0.05
CCDC78-213ENST00000482878 PDRG1Q9NUG6 133 aa14.74□□□□□ -0.05
CCDC78-213ENST00000482878 PA2G4Q9UQ80 394 aaKnown RBP14.74□□□□□ -0.05
CCDC78-213ENST00000482878 ST3GAL1Q11201 340 aa14.74□□□□□ -0.05
CCDC78-213ENST00000482878 LRRC59Q96AG4 307 aaKnown RBP14.74□□□□□ -0.05
CCDC78-213ENST00000482878 TRIM34Q9BYJ4 488 aa14.74□□□□□ -0.05
CCDC78-213ENST00000482878 CLASRPQ8N2M8 674 aaKnown RBP14.73□□□□□ -0.05
CCDC78-213ENST00000482878 ATP6V1DQ9Y5K8 247 aa14.73□□□□□ -0.05
CCDC78-213ENST00000482878 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
CCDC78-213ENST00000482878 FUCA2Q9BTY2 467 aa14.73□□□□□ -0.05
CCDC78-213ENST00000482878 PYCARDQ9ULZ3 195 aa14.73□□□□□ -0.05
CCDC78-213ENST00000482878 HOXB7P09629 217 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 TEFQ10587 303 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 ZNF592Q92610 1267 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 DDX17Q92841 729 aaKnown RBP14.72□□□□□ -0.05
CCDC78-213ENST00000482878 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 ECHDC1Q9NTX5 307 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 TNNT3P45378 269 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-213ENST00000482878 MTX1Q13505 466 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 COL9A3Q14050 684 aaPredicted RBP14.72□□□□□ -0.05
CCDC78-213ENST00000482878 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 ANKRD7Q92527 254 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 KDM4AO75164 1064 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 ME3Q16798 604 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 MPRIPQ6WCQ1 1025 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 NECAB1Q8N987 351 aa14.72□□□□□ -0.05
CCDC78-213ENST00000482878 BTBD11A6QL63 1104 aa14.71□□□□□ -0.05
CCDC78-213ENST00000482878 IRX3P78415 501 aaPredicted RBP14.71□□□□□ -0.05
CCDC78-213ENST00000482878 C16orf45Q96MC5 204 aaPredicted RBP14.71□□□□□ -0.05
CCDC78-213ENST00000482878 CYP46A1Q9Y6A2 500 aa14.71□□□□□ -0.05
CCDC78-213ENST00000482878 AP5Z1O43299 807 aa14.71□□□□□ -0.05
CCDC78-213ENST00000482878 NECTIN1Q15223 517 aa14.71□□□□□ -0.05
CCDC78-213ENST00000482878 PROSER2Q86WR7 435 aaPredicted RBP14.71□□□□□ -0.05
CCDC78-213ENST00000482878 DRC7Q8IY82 874 aa14.71□□□□□ -0.05
CCDC78-213ENST00000482878 MAP3K2Q9Y2U5 619 aa14.71□□□□□ -0.05
CCDC78-213ENST00000482878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.71□□□□□ -0.05
CCDC78-213ENST00000482878 CACNA1FO60840 1977 aa14.71□□□□□ -0.05
CCDC78-213ENST00000482878 TCHHQ07283 1943 aa14.71□□□□□ -0.06
CCDC78-213ENST00000482878 VPS37CA5D8V6 355 aaPredicted RBP14.71□□□□□ -0.06
CCDC78-213ENST00000482878 PROSER3Q2NL68 480 aa14.71□□□□□ -0.06
CCDC78-213ENST00000482878 IP6K1Q92551 441 aa14.71□□□□□ -0.06
CCDC78-213ENST00000482878 KCNB2Q92953 911 aa14.71□□□□□ -0.06
CCDC78-213ENST00000482878 C9orf78Q9NZ63 289 aaPredicted RBP14.71□□□□□ -0.06
CCDC78-213ENST00000482878 IFIT2P09913 472 aaKnown RBP14.7□□□□□ -0.06
CCDC78-213ENST00000482878 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
CCDC78-213ENST00000482878 TM6SF1Q9BZW5 370 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 SPTLC3Q9NUV7 552 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 MARF1Q9Y4F3 1742 aaKnown RBP14.7□□□□□ -0.06
CCDC78-213ENST00000482878 ANKARQ7Z5J8 1434 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 GOLGA6L6A8MZA4 724 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 NCBP1Q09161 790 aaKnown RBP14.7□□□□□ -0.06
CCDC78-213ENST00000482878 NAA30Q147X3 362 aaPredicted RBP14.7□□□□□ -0.06
CCDC78-213ENST00000482878 ANKLE2Q86XL3 938 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 FAM227BQ96M60 508 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 NLRP2Q9NX02 1062 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 TAOK2Q9UL54 1235 aa14.7□□□□□ -0.06
CCDC78-213ENST00000482878 ZSCAN31Q96LW9 406 aaPredicted RBP14.69□□□□□ -0.06
CCDC78-213ENST00000482878 SH2B1Q9NRF2 756 aaPredicted RBP14.69□□□□□ -0.06
CCDC78-213ENST00000482878 TPCN1Q9ULQ1 816 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 SLFN14P0C7P3 912 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 AACSQ86V21 672 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 CALCOCO1Q9P1Z2 691 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
CCDC78-213ENST00000482878 CCDC171Q6TFL3 1326 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 MED1Q15648 1581 aaPredicted RBP14.69□□□□□ -0.06
CCDC78-213ENST00000482878 CRYBG1Q9Y4K1 1723 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 EVI5LQ96CN4 794 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 ORAI2Q96SN7 254 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 DBF4Q9UBU7 674 aaPredicted RBP14.69□□□□□ -0.06
CCDC78-213ENST00000482878 PHF8Q9UPP1 1060 aa14.69□□□□□ -0.06
CCDC78-213ENST00000482878 SLIT1O75093 1534 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 ZNF530Q6P9A1 599 aaPredicted RBP14.68□□□□□ -0.06
CCDC78-213ENST00000482878 ZBTB9Q96C00 473 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 PRAMEF22A3QJZ6 481 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 KIAA1524Q8TCG1 905 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 CTNNA3Q9UI47 895 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 KRT222Q8N1A0 295 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 CABLES1Q8TDN4 633 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 GPATCH3Q96I76 525 aa14.68□□□□□ -0.06
CCDC78-213ENST00000482878 ZKSCAN1P17029 563 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-213ENST00000482878 FAM173BQ6P4H8 233 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 CCDC112Q8NEF3 446 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 SASH1O94885 1247 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 PIP4K2AP48426 406 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-213ENST00000482878 NMIQ13287 307 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-213ENST00000482878 TERF2Q15554 542 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 AKAP4Q5JQC9 854 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 FERMT3Q86UX7 667 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 EAF2Q96CJ1 260 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-213ENST00000482878 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC78-213ENST00000482878 V9GYY5 206 aaPredicted RBP14.67□□□□□ -0.06
CCDC78-213ENST00000482878 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 ALDH1L1O75891 902 aa14.67□□□□□ -0.06
CCDC78-213ENST00000482878 KSR2Q6VAB6 950 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms