RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 IGKV5-2P06315 115 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
DDR1-244ENST00000482873 UVSSAQ2YD98 709 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 EPHA10Q5JZY3 1008 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 EAF2Q96CJ1 260 aaPredicted RBP18.25■□□□□ 0.51
DDR1-244ENST00000482873 PRIMPOLQ96LW4 560 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 TCEANC2Q96MN5 208 aa18.25■□□□□ 0.51
DDR1-244ENST00000482873 WDR33Q9C0J8 1336 aaKnown RBP18.25■□□□□ 0.51
DDR1-244ENST00000482873 LARGE1O95461 756 aa18.24■□□□□ 0.51
DDR1-244ENST00000482873 CHGBP05060 677 aa18.24■□□□□ 0.51
DDR1-244ENST00000482873 FAM177BA6PVY3 158 aa18.24■□□□□ 0.51
DDR1-244ENST00000482873 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
DDR1-244ENST00000482873 RAD50Q92878 1312 aa18.23■□□□□ 0.51
DDR1-244ENST00000482873 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
DDR1-244ENST00000482873 CNPY2Q9Y2B0 182 aa18.23■□□□□ 0.51
DDR1-244ENST00000482873 TUBGCP6Q96RT7 1819 aa18.22■□□□□ 0.51
DDR1-244ENST00000482873 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
DDR1-244ENST00000482873 GLRX3O76003 335 aaKnown RBP18.22■□□□□ 0.51
DDR1-244ENST00000482873 GTF2F1P35269 517 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDR1-244ENST00000482873 G3BP1Q13283 466 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDR1-244ENST00000482873 CCDC183Q5T5S1 534 aa18.22■□□□□ 0.51
DDR1-244ENST00000482873 DDX21Q9NR30 783 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDR1-244ENST00000482873 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
DDR1-244ENST00000482873 HMGN5P82970 282 aaKnown RBP18.22■□□□□ 0.51
DDR1-244ENST00000482873 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
DDR1-244ENST00000482873 LINS1Q8NG48 757 aa18.22■□□□□ 0.51
DDR1-244ENST00000482873 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
DDR1-244ENST00000482873 ADAMTSL3P82987 1691 aa18.21■□□□□ 0.51
DDR1-244ENST00000482873 KCNJ4P48050 445 aa18.21■□□□□ 0.51
DDR1-244ENST00000482873 HSP90AB4PQ58FF6 505 aa18.21■□□□□ 0.51
DDR1-244ENST00000482873 TMEM87AQ8NBN3 555 aa18.21■□□□□ 0.51
DDR1-244ENST00000482873 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.51
DDR1-244ENST00000482873 AOX1Q06278 1338 aa18.21■□□□□ 0.51
DDR1-244ENST00000482873 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
DDR1-244ENST00000482873 ZSCAN20P17040 1043 aaPredicted RBP18.2■□□□□ 0.5
DDR1-244ENST00000482873 ATF3P18847 181 aa18.2■□□□□ 0.5
DDR1-244ENST00000482873 CCDC83Q8IWF9 413 aa18.2■□□□□ 0.5
DDR1-244ENST00000482873 C19orf44Q9H6X5 657 aa18.2■□□□□ 0.5
DDR1-244ENST00000482873 SLC52A2Q9HAB3 445 aa18.2■□□□□ 0.5
DDR1-244ENST00000482873 ALDH1L1O75891 902 aa18.2■□□□□ 0.5
DDR1-244ENST00000482873 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
DDR1-244ENST00000482873 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
DDR1-244ENST00000482873 NPHP3Q7Z494 1330 aa18.19■□□□□ 0.5
DDR1-244ENST00000482873 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
DDR1-244ENST00000482873 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
DDR1-244ENST00000482873 SPTLC3Q9NUV7 552 aa18.19■□□□□ 0.5
DDR1-244ENST00000482873 PHKG2P15735 406 aa18.19■□□□□ 0.5
DDR1-244ENST00000482873 MED1Q15648 1581 aaPredicted RBP18.19■□□□□ 0.5
DDR1-244ENST00000482873 KDM4AO75164 1064 aa18.18■□□□□ 0.5
DDR1-244ENST00000482873 NMIQ13287 307 aaPredicted RBP18.18■□□□□ 0.5
DDR1-244ENST00000482873 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
DDR1-244ENST00000482873 KIF3AQ9Y496 699 aa18.18■□□□□ 0.5
DDR1-244ENST00000482873 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
DDR1-244ENST00000482873 CYP27B1O15528 508 aa18.18■□□□□ 0.5
DDR1-244ENST00000482873 PLCB2Q00722 1185 aa18.18■□□□□ 0.5
DDR1-244ENST00000482873 CHMP3Q9Y3E7 222 aa18.18■□□□□ 0.5
DDR1-244ENST00000482873 NEURL1BA8MQ27 555 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 CBX1P83916 185 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 MTX1Q13505 466 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 C1orf167Q5SNV9 1468 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 AP5Z1O43299 807 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
DDR1-244ENST00000482873 UBE2HP62256 183 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 DMTNQ08495 405 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 NEXNQ0ZGT2 675 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 BBXQ8WY36 941 aaPredicted RBP18.17■□□□□ 0.5
DDR1-244ENST00000482873 TTC14Q96N46 770 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 FSD1Q9BTV5 496 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 TTC41PQ6P2S7 1318 aa18.17■□□□□ 0.5
DDR1-244ENST00000482873 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 GIMAP6Q6P9H5 292 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 KDM3BQ7LBC6 1761 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 FIBPO43427 364 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 SYT1P21579 422 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 GCKRQ14397 625 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 ANKRD13DQ6ZTN6 518 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 GPATCH3Q96I76 525 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 BCL2L12Q9HB09 334 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 NAP1L2Q9ULW6 460 aaPredicted RBP18.16■□□□□ 0.5
DDR1-244ENST00000482873 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 HEG1Q9ULI3 1381 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 FUCA2Q9BTY2 467 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 CHMP4AQ9BY43 222 aa18.16■□□□□ 0.5
DDR1-244ENST00000482873 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
DDR1-244ENST00000482873 STX6O43752 255 aa18.15■□□□□ 0.5
DDR1-244ENST00000482873 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
DDR1-244ENST00000482873 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
DDR1-244ENST00000482873 LARP1Q6PKG0 1096 aaKnown RBP18.15■□□□□ 0.5
DDR1-244ENST00000482873 PDRG1Q9NUG6 133 aa18.15■□□□□ 0.5
DDR1-244ENST00000482873 LIMCH1Q9UPQ0 1083 aa18.15■□□□□ 0.5
DDR1-244ENST00000482873 RBM8AQ9Y5S9 174 aaKnown RBP18.15■□□□□ 0.5
DDR1-244ENST00000482873 GTF2E1P29083 439 aaPredicted RBP18.15■□□□□ 0.5
DDR1-244ENST00000482873 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
DDR1-244ENST00000482873 SMC3Q9UQE7 1217 aa18.15■□□□□ 0.5
DDR1-244ENST00000482873 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
DDR1-244ENST00000482873 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
DDR1-244ENST00000482873 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms