RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 RASSF7Q02833 373 aa21.89■■□□□ 1.09
NELFCD-208ENST00000482747 PARP10Q53GL7 1025 aa21.89■■□□□ 1.09
NELFCD-208ENST00000482747 HSP90AB3PQ58FF7 597 aa21.89■■□□□ 1.09
NELFCD-208ENST00000482747 RTL5Q5HYW3 569 aaPredicted RBP21.89■■□□□ 1.09
NELFCD-208ENST00000482747 KLRG2A4D1S0 409 aaPredicted RBP21.88■■□□□ 1.09
NELFCD-208ENST00000482747 PRPF40BQ6NWY9 871 aaKnown RBP21.88■■□□□ 1.09
NELFCD-208ENST00000482747 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
NELFCD-208ENST00000482747 ANKRD36CQ5JPF3 1778 aa21.87■■□□□ 1.09
NELFCD-208ENST00000482747 SLX4Q8IY92 1834 aa21.87■■□□□ 1.09
NELFCD-208ENST00000482747 HCLS1P14317 486 aaPredicted RBP21.87■■□□□ 1.09
NELFCD-208ENST00000482747 STYK1Q6J9G0 422 aa21.87■■□□□ 1.09
NELFCD-208ENST00000482747 OLFM4Q6UX06 510 aa21.87■■□□□ 1.09
NELFCD-208ENST00000482747 MYH16Q9H6N6 1097 aa21.87■■□□□ 1.09
NELFCD-208ENST00000482747 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
NELFCD-208ENST00000482747 ZNF526Q8TF50 670 aaPredicted RBP21.86■■□□□ 1.09
NELFCD-208ENST00000482747 CDCA7LQ96GN5 454 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 PDZRN3Q9UPQ7 1066 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 ARFGEF2Q9Y6D5 1785 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 NPR1P16066 1061 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 SLC51AQ86UW1 340 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 CNKSR1Q969H4 720 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 MYD88Q99836 296 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 ISCA1Q9BUE6 129 aa21.86■■□□□ 1.09
NELFCD-208ENST00000482747 PRELPP51888 382 aa21.85■■□□□ 1.09
NELFCD-208ENST00000482747 FAM89AQ96GI7 184 aa21.85■■□□□ 1.09
NELFCD-208ENST00000482747 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
NELFCD-208ENST00000482747 PI4KAP2A4QPH2 592 aa21.84■■□□□ 1.09
NELFCD-208ENST00000482747 C9orf131Q5VYM1 1079 aa21.84■■□□□ 1.09
NELFCD-208ENST00000482747 PI4KAP1Q8N8J0 262 aa21.84■■□□□ 1.09
NELFCD-208ENST00000482747 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
NELFCD-208ENST00000482747 MAP3K2Q9Y2U5 619 aa21.84■■□□□ 1.09
NELFCD-208ENST00000482747 NFKBIEO00221 500 aa21.83■■□□□ 1.08
NELFCD-208ENST00000482747 CRY2Q49AN0 593 aa21.83■■□□□ 1.08
NELFCD-208ENST00000482747 CHMP4AQ9BY43 222 aa21.82■■□□□ 1.08
NELFCD-208ENST00000482747 RNF181Q9P0P0 153 aa21.82■■□□□ 1.08
NELFCD-208ENST00000482747 ADCY9O60503 1353 aa21.82■■□□□ 1.08
NELFCD-208ENST00000482747 SH3TC1Q8TE82 1336 aa21.81■■□□□ 1.08
NELFCD-208ENST00000482747 RPGRQ92834 1020 aaKnown RBP21.81■■□□□ 1.08
NELFCD-208ENST00000482747 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
NELFCD-208ENST00000482747 DDX58O95786 925 aaKnown RBP21.8■■□□□ 1.08
NELFCD-208ENST00000482747 FLIIQ13045 1269 aa21.8■■□□□ 1.08
NELFCD-208ENST00000482747 SLC10A5Q5PT55 438 aa21.8■■□□□ 1.08
NELFCD-208ENST00000482747 KSR2Q6VAB6 950 aa21.8■■□□□ 1.08
NELFCD-208ENST00000482747 C7orf43Q8WVR3 580 aa21.8■■□□□ 1.08
NELFCD-208ENST00000482747 SLFN5Q08AF3 891 aa21.8■■□□□ 1.08
NELFCD-208ENST00000482747 METTL22Q9BUU2 404 aaPredicted RBP21.8■■□□□ 1.08
NELFCD-208ENST00000482747 SBF1O95248 1867 aa21.78■■□□□ 1.08
NELFCD-208ENST00000482747 E9PSI1 815 aa21.78■■□□□ 1.08
NELFCD-208ENST00000482747 ALDH1B1P30837 517 aa21.78■■□□□ 1.08
NELFCD-208ENST00000482747 FKBP5Q13451 457 aaPredicted RBP21.78■■□□□ 1.08
NELFCD-208ENST00000482747 CWF19L2Q2TBE0 894 aaKnown RBP21.78■■□□□ 1.08
NELFCD-208ENST00000482747 IGKV5-2P06315 115 aa21.77■■□□□ 1.08
NELFCD-208ENST00000482747 TRIM28Q13263 835 aaKnown RBP21.77■■□□□ 1.08
NELFCD-208ENST00000482747 RIC1Q4ADV7 1423 aa21.77■■□□□ 1.08
NELFCD-208ENST00000482747 HOXA10P31260 410 aaPredicted RBP21.76■■□□□ 1.07
NELFCD-208ENST00000482747 RBM17Q96I25 401 aaKnown RBP21.76■■□□□ 1.07
NELFCD-208ENST00000482747 LAMB2P55268 1798 aa21.76■■□□□ 1.07
NELFCD-208ENST00000482747 RNF123Q5XPI4 1314 aa21.76■■□□□ 1.07
NELFCD-208ENST00000482747 CCDC88AQ3V6T2 1871 aa21.75■■□□□ 1.07
NELFCD-208ENST00000482747 F6X3S4 739 aa21.75■■□□□ 1.07
NELFCD-208ENST00000482747 IRS4O14654 1257 aaPredicted RBP21.75■■□□□ 1.07
NELFCD-208ENST00000482747 LMNB1P20700 586 aa21.75■■□□□ 1.07
NELFCD-208ENST00000482747 ZBTB38Q8NAP3 1195 aaPredicted RBP21.75■■□□□ 1.07
NELFCD-208ENST00000482747 CCDC191Q8NCU4 936 aa21.75■■□□□ 1.07
NELFCD-208ENST00000482747 CWC25Q9NXE8 425 aaPredicted RBP21.75■■□□□ 1.07
NELFCD-208ENST00000482747 DDX60Q8IY21 1712 aaKnown RBP21.74■■□□□ 1.07
NELFCD-208ENST00000482747 TAF1P21675 1872 aa21.74■■□□□ 1.07
NELFCD-208ENST00000482747 FER1L6Q2WGJ9 1857 aa21.74■■□□□ 1.07
NELFCD-208ENST00000482747 ABCC4O15439 1325 aa21.74■■□□□ 1.07
NELFCD-208ENST00000482747 CCDC93Q567U6 631 aa21.74■■□□□ 1.07
NELFCD-208ENST00000482747 TAOK3Q9H2K8 898 aa21.74■■□□□ 1.07
NELFCD-208ENST00000482747 GPBP1L1Q9HC44 474 aaPredicted RBP21.74■■□□□ 1.07
NELFCD-208ENST00000482747 CRAMP1Q96RY5 1269 aa21.73■■□□□ 1.07
NELFCD-208ENST00000482747 BCL2L13Q9BXK5 485 aa21.73■■□□□ 1.07
NELFCD-208ENST00000482747 NEXNQ0ZGT2 675 aa21.72■■□□□ 1.07
NELFCD-208ENST00000482747 CCDC85AQ96PX6 553 aaPredicted RBP21.72■■□□□ 1.07
NELFCD-208ENST00000482747 NEURL1BA8MQ27 555 aa21.72■■□□□ 1.07
NELFCD-208ENST00000482747 PPEF1O14829 653 aaPredicted RBP21.72■■□□□ 1.07
NELFCD-208ENST00000482747 HNRNPUQ00839 825 aaKnown RBP eCLIP21.72■■□□□ 1.07
NELFCD-208ENST00000482747 DNAAF4Q8WXU2 420 aa21.72■■□□□ 1.07
NELFCD-208ENST00000482747 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
NELFCD-208ENST00000482747 PCCAP05165 728 aaPredicted RBP21.71■■□□□ 1.07
NELFCD-208ENST00000482747 TRMT2AQ8IZ69 625 aaKnown RBP21.71■■□□□ 1.07
NELFCD-208ENST00000482747 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
NELFCD-208ENST00000482747 DDX46Q7L014 1031 aaKnown RBP21.7■■□□□ 1.06
NELFCD-208ENST00000482747 COL4A1P02462 1669 aa21.7■■□□□ 1.06
NELFCD-208ENST00000482747 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
NELFCD-208ENST00000482747 CACNA1FO60840 1977 aa21.69■■□□□ 1.06
NELFCD-208ENST00000482747 NMRK2Q9NPI5 230 aa21.69■■□□□ 1.06
NELFCD-208ENST00000482747 FKBP4Q02790 459 aaKnown RBP eCLIP21.68■■□□□ 1.06
NELFCD-208ENST00000482747 UBE3BQ7Z3V4 1068 aa21.68■■□□□ 1.06
NELFCD-208ENST00000482747 MRPL50Q8N5N7 158 aaKnown RBP21.68■■□□□ 1.06
NELFCD-208ENST00000482747 CELF1Q92879 486 aaKnown RBP21.68■■□□□ 1.06
NELFCD-208ENST00000482747 LTBP3Q9NS15 1303 aa21.67■■□□□ 1.06
NELFCD-208ENST00000482747 GRAPQ13588 217 aa21.67■■□□□ 1.06
NELFCD-208ENST00000482747 SF3B3Q15393 1217 aaKnown RBP21.67■■□□□ 1.06
NELFCD-208ENST00000482747 RTKN2Q8IZC4 609 aa21.67■■□□□ 1.06
NELFCD-208ENST00000482747 GRAPLQ8TC17 118 aaPredicted RBP21.67■■□□□ 1.06
NELFCD-208ENST00000482747 SEC31BQ9NQW1 1179 aa21.67■■□□□ 1.06
NELFCD-208ENST00000482747 SNED1Q8TER0 1413 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms