RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 F13A1P00488 732 aa17■□□□□ 0.31
COL9A2-207ENST00000482722 RHPN1Q8TCX5 695 aa17■□□□□ 0.31
COL9A2-207ENST00000482722 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
COL9A2-207ENST00000482722 SMC3Q9UQE7 1217 aa17■□□□□ 0.31
COL9A2-207ENST00000482722 PROSER3Q2NL68 480 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 TAF3Q5VWG9 929 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 PXDNQ92626 1479 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 LRMPQ12912 555 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 CCDC83Q8IWF9 413 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
COL9A2-207ENST00000482722 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-207ENST00000482722 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
COL9A2-207ENST00000482722 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
COL9A2-207ENST00000482722 ZBTB22O15209 634 aa16.98■□□□□ 0.31
COL9A2-207ENST00000482722 VPS37CA5D8V6 355 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-207ENST00000482722 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
COL9A2-207ENST00000482722 GABPB1Q06547 395 aaPredicted RBP16.98■□□□□ 0.31
COL9A2-207ENST00000482722 SMTNL1A8MU46 457 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 CCDC192P0DO97 292 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 CAMK4Q16566 473 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 CCDC186Q7Z3E2 898 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 DDX41Q9UJV9 622 aaKnown RBP16.97■□□□□ 0.31
COL9A2-207ENST00000482722 LIMCH1Q9UPQ0 1083 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
COL9A2-207ENST00000482722 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
COL9A2-207ENST00000482722 SYCP1Q15431 976 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 TTC14Q96N46 770 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
COL9A2-207ENST00000482722 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
COL9A2-207ENST00000482722 SGSM2O43147 1006 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 ERBB3P21860 1342 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 FAM173BQ6P4H8 233 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 DNAAF4Q8WXU2 420 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 RAD50Q92878 1312 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 GJB2P29033 226 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 LUZP1Q86V48 1076 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
COL9A2-207ENST00000482722 TNNT1P13805 278 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 FERMT3Q86UX7 667 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 PI4K2BQ8TCG2 481 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 MST1RQ04912 1400 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 NECAB1Q8N987 351 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 FAM200AQ8TCP9 573 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
COL9A2-207ENST00000482722 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.95■□□□□ 0.3
COL9A2-207ENST00000482722 ADCK5Q3MIX3 580 aa16.95■□□□□ 0.3
COL9A2-207ENST00000482722 RAB11FIP3O75154 756 aa16.94■□□□□ 0.3
COL9A2-207ENST00000482722 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
COL9A2-207ENST00000482722 CNTROBQ8N137 903 aa16.94■□□□□ 0.3
COL9A2-207ENST00000482722 BRINP3Q76B58 766 aa16.94■□□□□ 0.3
COL9A2-207ENST00000482722 DRC7Q8IY82 874 aa16.94■□□□□ 0.3
COL9A2-207ENST00000482722 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
COL9A2-207ENST00000482722 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
COL9A2-207ENST00000482722 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
COL9A2-207ENST00000482722 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
COL9A2-207ENST00000482722 KIF18AQ8NI77 898 aa16.93■□□□□ 0.3
COL9A2-207ENST00000482722 C9orf78Q9NZ63 289 aaPredicted RBP16.93■□□□□ 0.3
COL9A2-207ENST00000482722 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
COL9A2-207ENST00000482722 MORC2Q9Y6X9 1032 aaPredicted RBP16.93■□□□□ 0.3
COL9A2-207ENST00000482722 POLA2Q14181 598 aa16.93■□□□□ 0.3
COL9A2-207ENST00000482722 CCDC112Q8NEF3 446 aa16.93■□□□□ 0.3
COL9A2-207ENST00000482722 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
COL9A2-207ENST00000482722 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
COL9A2-207ENST00000482722 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
COL9A2-207ENST00000482722 CKAP2LQ8IYA6 745 aa16.92■□□□□ 0.3
COL9A2-207ENST00000482722 KLHL34Q8N239 644 aa16.92■□□□□ 0.3
COL9A2-207ENST00000482722 MYL6BP14649 208 aa16.92■□□□□ 0.3
COL9A2-207ENST00000482722 PTH1RQ03431 593 aa16.92■□□□□ 0.3
COL9A2-207ENST00000482722 TYRO3Q06418 890 aa16.92■□□□□ 0.3
COL9A2-207ENST00000482722 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
COL9A2-207ENST00000482722 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
COL9A2-207ENST00000482722 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
COL9A2-207ENST00000482722 CWF19L2Q2TBE0 894 aaKnown RBP16.91■□□□□ 0.3
COL9A2-207ENST00000482722 STRN4Q9NRL3 753 aa16.91■□□□□ 0.3
COL9A2-207ENST00000482722 MAP3K11Q16584 847 aa16.91■□□□□ 0.3
COL9A2-207ENST00000482722 MAP3K2Q9Y2U5 619 aa16.91■□□□□ 0.3
COL9A2-207ENST00000482722 MED1Q15648 1581 aaPredicted RBP16.91■□□□□ 0.3
COL9A2-207ENST00000482722 TERF2Q15554 542 aa16.91■□□□□ 0.3
COL9A2-207ENST00000482722 TCEANC2Q96MN5 208 aa16.91■□□□□ 0.3
COL9A2-207ENST00000482722 PAXBP1Q9Y5B6 917 aa16.91■□□□□ 0.3
COL9A2-207ENST00000482722 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 AOX1Q06278 1338 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 LIG1P18858 919 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 CBX8Q9HC52 389 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 PDRG1Q9NUG6 133 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 TPD52L1Q16890 204 aaPredicted RBP16.9■□□□□ 0.3
COL9A2-207ENST00000482722 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
COL9A2-207ENST00000482722 ZNF592Q92610 1267 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 NUP62CLQ9H1M0 184 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
COL9A2-207ENST00000482722 VGLL3A8MV65 326 aa16.89■□□□□ 0.29
COL9A2-207ENST00000482722 EPB41L2O43491 1005 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms