RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
SPTLC1-206ENST00000482632 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
SPTLC1-206ENST00000482632 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
SPTLC1-206ENST00000482632 A0A0G2JLW4 131 aa12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 ST5P78524 1137 aa12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 EXOSC9Q06265 439 aaKnown RBP12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 PDIA6Q15084 440 aa12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 NBPF5PQ86XG9 351 aaPredicted RBP12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
SPTLC1-206ENST00000482632 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
SPTLC1-206ENST00000482632 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
SPTLC1-206ENST00000482632 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
SPTLC1-206ENST00000482632 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
SPTLC1-206ENST00000482632 CHMP4AQ9BY43 222 aa12.86□□□□□ -0.35
SPTLC1-206ENST00000482632 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
SPTLC1-206ENST00000482632 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
SPTLC1-206ENST00000482632 CACNA1FO60840 1977 aa12.85□□□□□ -0.35
SPTLC1-206ENST00000482632 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
SPTLC1-206ENST00000482632 DPEP1P16444 411 aa12.85□□□□□ -0.35
SPTLC1-206ENST00000482632 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
SPTLC1-206ENST00000482632 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
SPTLC1-206ENST00000482632 CHRNA5P30532 468 aa12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 TGFB2P61812 414 aa12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 PRR5LQ6MZQ0 368 aa12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 BRCA1P38398 1863 aaKnown RBP12.84□□□□□ -0.35
SPTLC1-206ENST00000482632 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPTLC1-206ENST00000482632 LRP10Q7Z4F1 713 aa12.83□□□□□ -0.36
SPTLC1-206ENST00000482632 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
SPTLC1-206ENST00000482632 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 DLEC1Q9Y238 1755 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 E9PSI1 815 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 H0YIN7 160 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 HSP90AB3PQ58FF7 597 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 TPTE2Q6XPS3 522 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 ANKRD13DQ6ZTN6 518 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 ZNF622Q969S3 477 aaKnown RBP eCLIP12.82□□□□□ -0.367e-10■■□□□ 11.4
SPTLC1-206ENST00000482632 NYXQ9GZU5 481 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
SPTLC1-206ENST00000482632 RIOK3O14730 519 aaKnown RBP12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 PDE6BP35913 854 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 PLBD2Q8NHP8 589 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 PIM2Q9P1W9 311 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 UBN2Q6ZU65 1347 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
SPTLC1-206ENST00000482632 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 PYGBP11216 843 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 ERFEQ4G0M1 354 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 SUSD4Q5VX71 490 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 LHX8Q68G74 356 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 MYD88Q99836 296 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 BRIP1Q9BX63 1249 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
SPTLC1-206ENST00000482632 GRIN3BO60391 1043 aa12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 VAMP4O75379 141 aa12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 TCIRG1Q13488 830 aa12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 DALRD3Q5D0E6 543 aaKnown RBP12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 ZNF34Q8IZ26 560 aa12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 UTP14AQ9BVJ6 771 aaKnown RBP12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 TRMT112Q9UI30 125 aaKnown RBP12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 ABCC12Q96J65 1359 aa12.79□□□□□ -0.36
SPTLC1-206ENST00000482632 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
SPTLC1-206ENST00000482632 FKBP5Q13451 457 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1-206ENST00000482632 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
SPTLC1-206ENST00000482632 G2E3Q7L622 706 aa12.78□□□□□ -0.36
SPTLC1-206ENST00000482632 MAP3K2Q9Y2U5 619 aa12.78□□□□□ -0.36
SPTLC1-206ENST00000482632 LAMB2P55268 1798 aa12.78□□□□□ -0.36
SPTLC1-206ENST00000482632 NTSR2O95665 410 aa12.77□□□□□ -0.37
SPTLC1-206ENST00000482632 KCNA3P22001 575 aa12.77□□□□□ -0.37
SPTLC1-206ENST00000482632 FLIIQ13045 1269 aa12.77□□□□□ -0.37
SPTLC1-206ENST00000482632 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
SPTLC1-206ENST00000482632 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
SPTLC1-206ENST00000482632 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
SPTLC1-206ENST00000482632 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1-206ENST00000482632 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
SPTLC1-206ENST00000482632 PI4KAP2A4QPH2 592 aa12.76□□□□□ -0.37
SPTLC1-206ENST00000482632 NEXNQ0ZGT2 675 aa12.76□□□□□ -0.37
SPTLC1-206ENST00000482632 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
SPTLC1-206ENST00000482632 PI4KAP1Q8N8J0 262 aa12.76□□□□□ -0.37
SPTLC1-206ENST00000482632 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms