RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZNF395Q9H8N7 513 aaPredicted RBP10.28□□□□□ -0.76
SNX13-208ENST00000482558 COL17A1Q9UMD9 1497 aaPredicted RBP10.28□□□□□ -0.76
SNX13-208ENST00000482558 MYBBP1AQ9BQG0 1328 aaKnown RBP10.28□□□□□ -0.76
SNX13-208ENST00000482558 PHF20L1A8MW92 1017 aa10.27□□□□□ -0.77
SNX13-208ENST00000482558 MYOM2P54296 1465 aa10.27□□□□□ -0.77
SNX13-208ENST00000482558 EFCAB6Q5THR3 1501 aa10.27□□□□□ -0.77
SNX13-208ENST00000482558 KIDINS220Q9ULH0 1771 aa10.26□□□□□ -0.77
SNX13-208ENST00000482558 PTGIRP43119 386 aa10.26□□□□□ -0.77
SNX13-208ENST00000482558 LYSMD3Q7Z3D4 306 aa10.26□□□□□ -0.77
SNX13-208ENST00000482558 OCSTAMPQ9BR26 566 aa10.26□□□□□ -0.77
SNX13-208ENST00000482558 ZMYM4Q5VZL5 1548 aa10.26□□□□□ -0.77
SNX13-208ENST00000482558 HECW2Q9P2P5 1572 aa10.26□□□□□ -0.77
SNX13-208ENST00000482558 MADDQ8WXG6 1647 aa10.25□□□□□ -0.77
SNX13-208ENST00000482558 SCAF11Q99590 1463 aaKnown RBP10.25□□□□□ -0.77
SNX13-208ENST00000482558 MSTNO14793 375 aa10.25□□□□□ -0.77
SNX13-208ENST00000482558 LILRA1O75019 489 aa10.25□□□□□ -0.77
SNX13-208ENST00000482558 NR6A1Q15406 480 aa10.25□□□□□ -0.77
SNX13-208ENST00000482558 ZNF784Q8NCA9 323 aaPredicted RBP10.25□□□□□ -0.77
SNX13-208ENST00000482558 ADAM32Q8TC27 787 aa10.25□□□□□ -0.77
SNX13-208ENST00000482558 TMC1Q8TDI8 760 aa10.25□□□□□ -0.77
SNX13-208ENST00000482558 RPGRIP1LQ68CZ1 1315 aa10.25□□□□□ -0.77
SNX13-208ENST00000482558 GLI2P10070 1586 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 NLRP13Q86W25 1043 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 FAM9BQ8IZU0 186 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 PNMA1Q8ND90 353 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 EPS8L1Q8TE68 723 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 TESK2Q96S53 571 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 POLR3GLQ9BT43 218 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 MBIPQ9NS73 344 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 CUEDC1Q9NWM3 386 aaPredicted RBP10.24□□□□□ -0.77
SNX13-208ENST00000482558 USTQ9Y2C2 406 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 CLTCL1P53675 1640 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 MROH1Q8NDA8 1641 aa10.24□□□□□ -0.77
SNX13-208ENST00000482558 KIF1BO60333 1816 aa10.23□□□□□ -0.77
SNX13-208ENST00000482558 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
SNX13-208ENST00000482558 PLA2G4EQ3MJ16 856 aa10.23□□□□□ -0.77
SNX13-208ENST00000482558 KDF1Q8NAX2 398 aaPredicted RBP10.23□□□□□ -0.77
SNX13-208ENST00000482558 DCAF5Q96JK2 942 aa10.23□□□□□ -0.77
SNX13-208ENST00000482558 TMPRSS4Q9NRS4 437 aa10.23□□□□□ -0.77
SNX13-208ENST00000482558 PARD3Q8TEW0 1356 aa10.23□□□□□ -0.77
SNX13-208ENST00000482558 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
SNX13-208ENST00000482558 ADAM23O75077 832 aa10.22□□□□□ -0.77
SNX13-208ENST00000482558 RNF144AP50876 292 aaPredicted RBP10.22□□□□□ -0.77
SNX13-208ENST00000482558 FOXR1Q6PIV2 292 aa10.22□□□□□ -0.77
SNX13-208ENST00000482558 CCDC125Q86Z20 511 aa10.22□□□□□ -0.77
SNX13-208ENST00000482558 TRIM22Q8IYM9 498 aa10.22□□□□□ -0.77
SNX13-208ENST00000482558 BEND7Q8N7W2 519 aaPredicted RBP10.22□□□□□ -0.77
SNX13-208ENST00000482558 GPR37L1O60883 481 aa10.21□□□□□ -0.77
SNX13-208ENST00000482558 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
SNX13-208ENST00000482558 WASHC4Q2M389 1173 aa10.21□□□□□ -0.77
SNX13-208ENST00000482558 SND1Q7KZF4 910 aaKnown RBP eCLIP10.21□□□□□ -0.77
SNX13-208ENST00000482558 PNISRQ8TF01 805 aaKnown RBP10.21□□□□□ -0.77
SNX13-208ENST00000482558 ZNF837Q96EG3 531 aaPredicted RBP10.21□□□□□ -0.77
SNX13-208ENST00000482558 LRRC4BQ9NT99 713 aa10.21□□□□□ -0.77
SNX13-208ENST00000482558 LRPPRCP42704 1394 aaKnown RBP10.21□□□□□ -0.78
SNX13-208ENST00000482558 SMG6Q86US8 1419 aaKnown RBP10.21□□□□□ -0.78
SNX13-208ENST00000482558 ESPNB1AK53 854 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 ERVH48-1M5A8F1 160 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 CANXP27824 592 aaKnown RBP10.2□□□□□ -0.78
SNX13-208ENST00000482558 ARHGAP31Q2M1Z3 1444 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 XP32Q5T750 250 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 PODNQ7Z5L7 613 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 SPOCK3Q9BQ16 436 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 NPC1L1Q9UHC9 1359 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 NRXN1Q9ULB1 1477 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 MAP3K4Q9Y6R4 1608 aa10.2□□□□□ -0.78
SNX13-208ENST00000482558 ZC3H13Q5T200 1668 aaKnown RBP10.19□□□□□ -0.78
SNX13-208ENST00000482558 SETBP1Q9Y6X0 1596 aa10.19□□□□□ -0.78
SNX13-208ENST00000482558 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
SNX13-208ENST00000482558 BCRP11274 1271 aa10.19□□□□□ -0.78
SNX13-208ENST00000482558 PDE3BQ13370 1112 aa10.19□□□□□ -0.78
SNX13-208ENST00000482558 CCDC184Q52MB2 194 aa10.19□□□□□ -0.78
SNX13-208ENST00000482558 SEPT12Q8IYM1 358 aa10.19□□□□□ -0.78
SNX13-208ENST00000482558 PPRC1Q5VV67 1664 aaKnown RBP10.18□□□□□ -0.78
SNX13-208ENST00000482558 SYNMO15061 1565 aa10.18□□□□□ -0.78
SNX13-208ENST00000482558 CNTNAP5Q8WYK1 1306 aa10.18□□□□□ -0.78
SNX13-208ENST00000482558 POM121CA8CG34 1229 aa10.18□□□□□ -0.78
SNX13-208ENST00000482558 CALR3Q96L12 384 aaKnown RBP10.18□□□□□ -0.78
SNX13-208ENST00000482558 ADGRB3O60242 1522 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 IFT172Q9UG01 1749 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 GPC1P35052 558 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 DZIP3Q86Y13 1208 aaKnown RBP10.17□□□□□ -0.78
SNX13-208ENST00000482558 GLMNQ92990 594 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 IGSF5Q9NSI5 407 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 NUDCQ9Y266 331 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 FRMPD1Q5SYB0 1578 aa10.17□□□□□ -0.78
SNX13-208ENST00000482558 PPM1GO15355 546 aaPredicted RBP10.16□□□□□ -0.78
SNX13-208ENST00000482558 ITGB2P05107 769 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 VAC14Q08AM6 782 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 PRICKLE2Q7Z3G6 844 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 PBXIP1Q96AQ6 731 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 PANK3Q9H999 370 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 ABCC3O15438 1527 aa10.16□□□□□ -0.78
SNX13-208ENST00000482558 UNCXA6NJT0 531 aa10.15□□□□□ -0.78
SNX13-208ENST00000482558 H7C1W4 665 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms