RNA–Protein interactions for RNA: ENST00000482424.1

CLIP2-205, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 5

Gene CLIP2, Length 971 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-205ENST00000482424 PHAXQ9H814 394 aaKnown RBP25.88■■□□□ 1.73
CLIP2-205ENST00000482424 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
CLIP2-205ENST00000482424 CACNA1SQ13698 1873 aa25.87■■□□□ 1.73
CLIP2-205ENST00000482424 CCER2I3L3R5 266 aa25.87■■□□□ 1.73
CLIP2-205ENST00000482424 TWISTNBQ3B726 338 aaPredicted RBP25.87■■□□□ 1.73
CLIP2-205ENST00000482424 ISCA1Q9BUE6 129 aa25.87■■□□□ 1.73
CLIP2-205ENST00000482424 FER1L6Q2WGJ9 1857 aa25.87■■□□□ 1.73
CLIP2-205ENST00000482424 NFKBIEO00221 500 aa25.86■■□□□ 1.73
CLIP2-205ENST00000482424 RASSF7Q02833 373 aa25.86■■□□□ 1.73
CLIP2-205ENST00000482424 ALDH1B1P30837 517 aa25.85■■□□□ 1.73
CLIP2-205ENST00000482424 PRELPP51888 382 aa25.85■■□□□ 1.73
CLIP2-205ENST00000482424 SPINK5Q9NQ38 1064 aaPredicted RBP25.85■■□□□ 1.73
CLIP2-205ENST00000482424 ZNF521Q96K83 1311 aa25.85■■□□□ 1.73
CLIP2-205ENST00000482424 HOXA10P31260 410 aaPredicted RBP25.84■■□□□ 1.73
CLIP2-205ENST00000482424 TRIM28Q13263 835 aaKnown RBP25.84■■□□□ 1.73
CLIP2-205ENST00000482424 SOGA3Q5TF21 947 aa25.84■■□□□ 1.73
CLIP2-205ENST00000482424 RNF181Q9P0P0 153 aa25.84■■□□□ 1.73
CLIP2-205ENST00000482424 LMNB1P20700 586 aa25.83■■□□□ 1.73
CLIP2-205ENST00000482424 GOLGA2Q08379 1002 aa25.83■■□□□ 1.73
CLIP2-205ENST00000482424 ZNF219Q9P2Y4 722 aaPredicted RBP25.83■■□□□ 1.73
CLIP2-205ENST00000482424 LTBP3Q9NS15 1303 aa25.83■■□□□ 1.73
CLIP2-205ENST00000482424 RIC3Q7Z5B4 369 aa25.82■■□□□ 1.72
CLIP2-205ENST00000482424 NLRP3Q96P20 1036 aa25.82■■□□□ 1.72
CLIP2-205ENST00000482424 GPBP1L1Q9HC44 474 aaPredicted RBP25.82■■□□□ 1.72
CLIP2-205ENST00000482424 TRMT112Q9UI30 125 aaKnown RBP25.82■■□□□ 1.72
CLIP2-205ENST00000482424 C3orf67Q6ZVT6 689 aa25.81■■□□□ 1.72
CLIP2-205ENST00000482424 SH3TC1Q8TE82 1336 aa25.81■■□□□ 1.72
CLIP2-205ENST00000482424 CCDC88AQ3V6T2 1871 aa25.81■■□□□ 1.72
CLIP2-205ENST00000482424 VAMP4O75379 141 aa25.8■■□□□ 1.72
CLIP2-205ENST00000482424 CRAMP1Q96RY5 1269 aa25.8■■□□□ 1.72
CLIP2-205ENST00000482424 STK31Q9BXU1 1019 aa25.8■■□□□ 1.72
CLIP2-205ENST00000482424 MYH16Q9H6N6 1097 aa25.8■■□□□ 1.72
CLIP2-205ENST00000482424 ZC3H4Q9UPT8 1303 aaKnown RBP25.8■■□□□ 1.72
CLIP2-205ENST00000482424 ATP5J2-PTCD1G3V325 749 aa25.79■■□□□ 1.72
CLIP2-205ENST00000482424 EXOSC9Q06265 439 aaKnown RBP25.79■■□□□ 1.72
CLIP2-205ENST00000482424 SYNE4Q8N205 404 aa25.79■■□□□ 1.72
CLIP2-205ENST00000482424 ZNF526Q8TF50 670 aaPredicted RBP25.79■■□□□ 1.72
CLIP2-205ENST00000482424 RPGRQ92834 1020 aaKnown RBP25.79■■□□□ 1.72
CLIP2-205ENST00000482424 DDX58O95786 925 aaKnown RBP25.78■■□□□ 1.72
CLIP2-205ENST00000482424 CCDC93Q567U6 631 aa25.78■■□□□ 1.72
CLIP2-205ENST00000482424 CACNA1FO60840 1977 aa25.77■■□□□ 1.72
CLIP2-205ENST00000482424 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
CLIP2-205ENST00000482424 RBM17Q96I25 401 aaKnown RBP25.77■■□□□ 1.72
CLIP2-205ENST00000482424 TAOK3Q9H2K8 898 aa25.77■■□□□ 1.72
CLIP2-205ENST00000482424 LAMB2P55268 1798 aa25.77■■□□□ 1.72
CLIP2-205ENST00000482424 TCERG1O14776 1098 aaKnown RBP25.76■■□□□ 1.71
CLIP2-205ENST00000482424 HCLS1P14317 486 aaPredicted RBP25.76■■□□□ 1.71
CLIP2-205ENST00000482424 KSR2Q6VAB6 950 aa25.76■■□□□ 1.71
CLIP2-205ENST00000482424 METTL22Q9BUU2 404 aaPredicted RBP25.76■■□□□ 1.71
CLIP2-205ENST00000482424 DICER1Q9UPY3 1922 aaKnown RBP25.76■■□□□ 1.71
CLIP2-205ENST00000482424 SNED1Q8TER0 1413 aa25.75■■□□□ 1.71
CLIP2-205ENST00000482424 G2E3Q7L622 706 aa25.75■■□□□ 1.71
CLIP2-205ENST00000482424 CC2D2BQ6DHV5 1058 aa25.74■■□□□ 1.71
CLIP2-205ENST00000482424 OLFM4Q6UX06 510 aa25.74■■□□□ 1.71
CLIP2-205ENST00000482424 RTKN2Q8IZC4 609 aa25.74■■□□□ 1.71
CLIP2-205ENST00000482424 CCDC191Q8NCU4 936 aa25.74■■□□□ 1.71
CLIP2-205ENST00000482424 FAM89AQ96GI7 184 aa25.74■■□□□ 1.71
CLIP2-205ENST00000482424 MYD88Q99836 296 aa25.74■■□□□ 1.71
CLIP2-205ENST00000482424 DDX60Q8IY21 1712 aaKnown RBP25.74■■□□□ 1.71
CLIP2-205ENST00000482424 PI4KAP2A4QPH2 592 aa25.73■■□□□ 1.71
CLIP2-205ENST00000482424 C1QTNF8P60827 252 aa25.73■■□□□ 1.71
CLIP2-205ENST00000482424 PI4KAP1Q8N8J0 262 aa25.73■■□□□ 1.71
CLIP2-205ENST00000482424 MAP3K2Q9Y2U5 619 aa25.73■■□□□ 1.71
CLIP2-205ENST00000482424 KIF3CO14782 793 aa25.72■■□□□ 1.71
CLIP2-205ENST00000482424 FKBP4Q02790 459 aaKnown RBP eCLIP25.72■■□□□ 1.71
CLIP2-205ENST00000482424 ZBTB38Q8NAP3 1195 aaPredicted RBP25.72■■□□□ 1.71
CLIP2-205ENST00000482424 ZNF428Q96B54 188 aa25.72■■□□□ 1.71
CLIP2-205ENST00000482424 TIAM2Q8IVF5 1701 aa25.71■■□□□ 1.71
CLIP2-205ENST00000482424 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
CLIP2-205ENST00000482424 ABCC4O15439 1325 aa25.7■■□□□ 1.71
CLIP2-205ENST00000482424 FLIIQ13045 1269 aa25.7■■□□□ 1.7
CLIP2-205ENST00000482424 SF3B3Q15393 1217 aaKnown RBP25.7■■□□□ 1.7
CLIP2-205ENST00000482424 GRIPAP1Q4V328 841 aa25.7■■□□□ 1.7
CLIP2-205ENST00000482424 KDM2BQ8NHM5 1336 aa25.69■■□□□ 1.7
CLIP2-205ENST00000482424 PPEF1O14829 653 aaPredicted RBP25.69■■□□□ 1.7
CLIP2-205ENST00000482424 PSMD1Q99460 953 aa25.69■■□□□ 1.7
CLIP2-205ENST00000482424 CWC25Q9NXE8 425 aaPredicted RBP25.69■■□□□ 1.7
CLIP2-205ENST00000482424 GLTPD2A6NH11 291 aa25.68■■□□□ 1.7
CLIP2-205ENST00000482424 IRS4O14654 1257 aaPredicted RBP25.68■■□□□ 1.7
CLIP2-205ENST00000482424 BBOX1O75936 387 aa25.68■■□□□ 1.7
CLIP2-205ENST00000482424 PCCAP05165 728 aaPredicted RBP25.68■■□□□ 1.7
CLIP2-205ENST00000482424 IGKV5-2P06315 115 aa25.68■■□□□ 1.7
CLIP2-205ENST00000482424 NMRK2Q9NPI5 230 aa25.68■■□□□ 1.7
CLIP2-205ENST00000482424 E9PSI1 815 aa25.67■■□□□ 1.7
CLIP2-205ENST00000482424 RTL5Q5HYW3 569 aaPredicted RBP25.67■■□□□ 1.7
CLIP2-205ENST00000482424 DDX46Q7L014 1031 aaKnown RBP25.67■■□□□ 1.7
CLIP2-205ENST00000482424 ATP6V0A2Q9Y487 856 aa25.67■■□□□ 1.7
CLIP2-205ENST00000482424 SLFN5Q08AF3 891 aa25.66■■□□□ 1.7
CLIP2-205ENST00000482424 HSP90B1P14625 803 aaKnown RBP25.65■■□□□ 1.7
CLIP2-205ENST00000482424 NEXNQ0ZGT2 675 aa25.65■■□□□ 1.7
CLIP2-205ENST00000482424 GRAPQ13588 217 aa25.65■■□□□ 1.7
CLIP2-205ENST00000482424 MIER1Q8N108 512 aa25.65■■□□□ 1.7
CLIP2-205ENST00000482424 GRAPLQ8TC17 118 aaPredicted RBP25.65■■□□□ 1.7
CLIP2-205ENST00000482424 ZNF277Q9NRM2 450 aaPredicted RBP25.65■■□□□ 1.7
CLIP2-205ENST00000482424 FKBP5Q13451 457 aaPredicted RBP25.64■■□□□ 1.7
CLIP2-205ENST00000482424 SLC51AQ86UW1 340 aa25.64■■□□□ 1.7
CLIP2-205ENST00000482424 SP8Q8IXZ3 490 aa25.64■■□□□ 1.7
CLIP2-205ENST00000482424 TAF1P21675 1872 aa25.64■■□□□ 1.69
CLIP2-205ENST00000482424 NEURL1BA8MQ27 555 aa25.63■■□□□ 1.69
CLIP2-205ENST00000482424 DPY19L2Q6NUT2 758 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms