RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 WDR63Q8IWG1 891 aa19.12■□□□□ 0.65
OPTN-210ENST00000482140 ALDH1B1P30837 517 aa19.11■□□□□ 0.65
OPTN-210ENST00000482140 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
OPTN-210ENST00000482140 RPGRQ92834 1020 aaKnown RBP19.11■□□□□ 0.65
OPTN-210ENST00000482140 RIC1Q4ADV7 1423 aa19.1■□□□□ 0.65
OPTN-210ENST00000482140 FER1L6Q2WGJ9 1857 aa19.1■□□□□ 0.65
OPTN-210ENST00000482140 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
OPTN-210ENST00000482140 LMNB1P20700 586 aa19.1■□□□□ 0.65
OPTN-210ENST00000482140 NLRP10Q86W26 655 aa19.1■□□□□ 0.65
OPTN-210ENST00000482140 TSPYL6Q8N831 410 aa19.1■□□□□ 0.65
OPTN-210ENST00000482140 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
OPTN-210ENST00000482140 RIC3Q7Z5B4 369 aa19.09■□□□□ 0.65
OPTN-210ENST00000482140 STK31Q9BXU1 1019 aa19.09■□□□□ 0.65
OPTN-210ENST00000482140 TRMT112Q9UI30 125 aaKnown RBP19.09■□□□□ 0.65
OPTN-210ENST00000482140 NFKBIEO00221 500 aa19.08■□□□□ 0.64
OPTN-210ENST00000482140 CRY2Q49AN0 593 aa19.08■□□□□ 0.64
OPTN-210ENST00000482140 NLRP3Q96P20 1036 aa19.08■□□□□ 0.64
OPTN-210ENST00000482140 PHAXQ9H814 394 aaKnown RBP19.08■□□□□ 0.64
OPTN-210ENST00000482140 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
OPTN-210ENST00000482140 DDX58O95786 925 aaKnown RBP19.07■□□□□ 0.64
OPTN-210ENST00000482140 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
OPTN-210ENST00000482140 RBM17Q96I25 401 aaKnown RBP19.07■□□□□ 0.64
OPTN-210ENST00000482140 TAOK3Q9H2K8 898 aa19.07■□□□□ 0.64
OPTN-210ENST00000482140 ATP5J2-PTCD1G3V325 749 aa19.06■□□□□ 0.64
OPTN-210ENST00000482140 TIAM2Q8IVF5 1701 aa19.05■□□□□ 0.64
OPTN-210ENST00000482140 SH3TC1Q8TE82 1336 aa19.05■□□□□ 0.64
OPTN-210ENST00000482140 SLC10A5Q5PT55 438 aa19.05■□□□□ 0.64
OPTN-210ENST00000482140 ISCA1Q9BUE6 129 aa19.05■□□□□ 0.64
OPTN-210ENST00000482140 MYH16Q9H6N6 1097 aa19.05■□□□□ 0.64
OPTN-210ENST00000482140 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
OPTN-210ENST00000482140 LTBP3Q9NS15 1303 aa19.04■□□□□ 0.64
OPTN-210ENST00000482140 ZC3H4Q9UPT8 1303 aaKnown RBP19.04■□□□□ 0.64
OPTN-210ENST00000482140 DICER1Q9UPY3 1922 aaKnown RBP19.04■□□□□ 0.64
OPTN-210ENST00000482140 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
OPTN-210ENST00000482140 HOXA10P31260 410 aaPredicted RBP19.04■□□□□ 0.64
OPTN-210ENST00000482140 C1QTNF8P60827 252 aa19.04■□□□□ 0.64
OPTN-210ENST00000482140 ZNF428Q96B54 188 aa19.04■□□□□ 0.64
OPTN-210ENST00000482140 LAMB2P55268 1798 aa19.04■□□□□ 0.64
OPTN-210ENST00000482140 CACNA1FO60840 1977 aa19.03■□□□□ 0.64
OPTN-210ENST00000482140 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
OPTN-210ENST00000482140 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
OPTN-210ENST00000482140 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
OPTN-210ENST00000482140 CRAMP1Q96RY5 1269 aa19.03■□□□□ 0.64
OPTN-210ENST00000482140 MYD88Q99836 296 aa19.03■□□□□ 0.64
OPTN-210ENST00000482140 PRELPP51888 382 aa19.02■□□□□ 0.64
OPTN-210ENST00000482140 EXOSC9Q06265 439 aaKnown RBP19.02■□□□□ 0.64
OPTN-210ENST00000482140 C3orf67Q6ZVT6 689 aa19.02■□□□□ 0.64
OPTN-210ENST00000482140 RTKN2Q8IZC4 609 aa19.02■□□□□ 0.64
OPTN-210ENST00000482140 SYNE4Q8N205 404 aa19.02■□□□□ 0.64
OPTN-210ENST00000482140 TRIM28Q13263 835 aaKnown RBP19.01■□□□□ 0.63
OPTN-210ENST00000482140 TMX4Q9H1E5 349 aaPredicted RBP19.01■□□□□ 0.63
OPTN-210ENST00000482140 PPEF1O14829 653 aaPredicted RBP19■□□□□ 0.63
OPTN-210ENST00000482140 SLC4A2P04920 1241 aa19■□□□□ 0.63
OPTN-210ENST00000482140 FKBP4Q02790 459 aaKnown RBP eCLIP19■□□□□ 0.63
OPTN-210ENST00000482140 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
OPTN-210ENST00000482140 OLFM4Q6UX06 510 aa19■□□□□ 0.63
OPTN-210ENST00000482140 FAM89AQ96GI7 184 aa19■□□□□ 0.63
OPTN-210ENST00000482140 METTL22Q9BUU2 404 aaPredicted RBP19■□□□□ 0.63
OPTN-210ENST00000482140 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
OPTN-210ENST00000482140 MAP3K2Q9Y2U5 619 aa19■□□□□ 0.63
OPTN-210ENST00000482140 DDX60Q8IY21 1712 aaKnown RBP19■□□□□ 0.63
OPTN-210ENST00000482140 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
OPTN-210ENST00000482140 KSR2Q6VAB6 950 aa18.99■□□□□ 0.63
OPTN-210ENST00000482140 DDX46Q7L014 1031 aaKnown RBP18.99■□□□□ 0.63
OPTN-210ENST00000482140 NMRK2Q9NPI5 230 aa18.99■□□□□ 0.63
OPTN-210ENST00000482140 PI4KAP2A4QPH2 592 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 KIF3CO14782 793 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 VAMP4O75379 141 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 HSP90B1P14625 803 aaKnown RBP18.98■□□□□ 0.63
OPTN-210ENST00000482140 NEXNQ0ZGT2 675 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 GRIPAP1Q4V328 841 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 DPY19L2Q6NUT2 758 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 PI4KAP1Q8N8J0 262 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 CCDC191Q8NCU4 936 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 CWC25Q9NXE8 425 aaPredicted RBP18.98■□□□□ 0.63
OPTN-210ENST00000482140 ABCC4O15439 1325 aa18.98■□□□□ 0.63
OPTN-210ENST00000482140 GLTPD2A6NH11 291 aa18.97■□□□□ 0.63
OPTN-210ENST00000482140 IRS4O14654 1257 aaPredicted RBP18.97■□□□□ 0.63
OPTN-210ENST00000482140 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
OPTN-210ENST00000482140 ZBTB38Q8NAP3 1195 aaPredicted RBP18.97■□□□□ 0.63
OPTN-210ENST00000482140 ZNF277Q9NRM2 450 aaPredicted RBP18.97■□□□□ 0.63
OPTN-210ENST00000482140 FLIIQ13045 1269 aa18.96■□□□□ 0.63
OPTN-210ENST00000482140 G2E3Q7L622 706 aa18.96■□□□□ 0.63
OPTN-210ENST00000482140 RRAGCQ9HB90 399 aa18.96■□□□□ 0.63
OPTN-210ENST00000482140 ZNF521Q96K83 1311 aa18.96■□□□□ 0.63
OPTN-210ENST00000482140 BBOX1O75936 387 aa18.95■□□□□ 0.62
OPTN-210ENST00000482140 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
OPTN-210ENST00000482140 DIEXFQ68CQ4 756 aaKnown RBP18.95■□□□□ 0.62
OPTN-210ENST00000482140 PSMD1Q99460 953 aa18.95■□□□□ 0.62
OPTN-210ENST00000482140 PCCAP05165 728 aaPredicted RBP18.94■□□□□ 0.62
OPTN-210ENST00000482140 IARSP41252 1262 aaKnown RBP18.94■□□□□ 0.62
OPTN-210ENST00000482140 GRAPQ13588 217 aa18.94■□□□□ 0.62
OPTN-210ENST00000482140 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
OPTN-210ENST00000482140 ATP6V0A2Q9Y487 856 aa18.94■□□□□ 0.62
OPTN-210ENST00000482140 TAF1P21675 1872 aa18.94■□□□□ 0.62
OPTN-210ENST00000482140 E9PSI1 815 aa18.93■□□□□ 0.62
OPTN-210ENST00000482140 TOMM70O94826 608 aa18.93■□□□□ 0.62
OPTN-210ENST00000482140 SF3B3Q15393 1217 aaKnown RBP18.93■□□□□ 0.62
OPTN-210ENST00000482140 SP8Q8IXZ3 490 aa18.92■□□□□ 0.62
OPTN-210ENST00000482140 JDP2Q8WYK2 163 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms