RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 ERC1Q8IUD2 1116 aa16.99■□□□□ 0.31
CCDC78-211ENST00000481804 CHMP4AQ9BY43 222 aa16.99■□□□□ 0.31
CCDC78-211ENST00000481804 NRBP1Q9UHY1 535 aa16.99■□□□□ 0.31
CCDC78-211ENST00000481804 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
CCDC78-211ENST00000481804 ZNF165P49910 485 aa16.99■□□□□ 0.31
CCDC78-211ENST00000481804 NMIQ13287 307 aaPredicted RBP16.99■□□□□ 0.31
CCDC78-211ENST00000481804 CCDC8Q9H0W5 538 aaPredicted RBP16.99■□□□□ 0.31
CCDC78-211ENST00000481804 DDX19AQ9NUU7 478 aaKnown RBP16.99■□□□□ 0.31
CCDC78-211ENST00000481804 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 GOLGA6L19H0YKK7 550 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 ST3GAL1Q11201 340 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 ANKRD1Q15327 319 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 H3BQV1 296 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 IGSF3O75054 1194 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 HSP90B1P14625 803 aaKnown RBP16.98■□□□□ 0.31
CCDC78-211ENST00000481804 FGD1P98174 961 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC78-211ENST00000481804 NECTIN1Q15223 517 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 IFFO2Q5TF58 517 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
CCDC78-211ENST00000481804 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 GTPBP4Q9BZE4 634 aaKnown RBP16.98■□□□□ 0.31
CCDC78-211ENST00000481804 DNAJC25Q9H1X3 360 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 NPHP3Q7Z494 1330 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 HIP1O00291 1037 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 CCDC112Q8NEF3 446 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 BABAM1Q9NWV8 329 aa16.98■□□□□ 0.31
CCDC78-211ENST00000481804 TNRQ92752 1358 aa16.97■□□□□ 0.31
CCDC78-211ENST00000481804 PDIA4P13667 645 aaKnown RBP16.97■□□□□ 0.31
CCDC78-211ENST00000481804 SIL1Q9H173 461 aa16.97■□□□□ 0.31
CCDC78-211ENST00000481804 SLC27A2O14975 620 aa16.97■□□□□ 0.31
CCDC78-211ENST00000481804 CEBPZQ03701 1054 aaKnown RBP16.97■□□□□ 0.31
CCDC78-211ENST00000481804 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
CCDC78-211ENST00000481804 XRN1Q8IZH2 1706 aaKnown RBP16.97■□□□□ 0.31
CCDC78-211ENST00000481804 AGLP35573 1532 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 ZNF75DP51815 510 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 KCNQ3O43525 872 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
CCDC78-211ENST00000481804 LEO1Q8WVC0 666 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-211ENST00000481804 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
CCDC78-211ENST00000481804 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 AMOTL2Q9Y2J4 779 aa16.96■□□□□ 0.31
CCDC78-211ENST00000481804 ELP1O95163 1332 aa16.96■□□□□ 0.3
CCDC78-211ENST00000481804 TMEM2Q9UHN6 1383 aa16.96■□□□□ 0.3
CCDC78-211ENST00000481804 ZSCAN25Q6NSZ9 544 aa16.95■□□□□ 0.3
CCDC78-211ENST00000481804 FAM208AQ9UK61 1670 aaKnown RBP16.95■□□□□ 0.3
CCDC78-211ENST00000481804 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
CCDC78-211ENST00000481804 FOSBP53539 338 aa16.95■□□□□ 0.3
CCDC78-211ENST00000481804 CWF19L2Q2TBE0 894 aaKnown RBP16.95■□□□□ 0.3
CCDC78-211ENST00000481804 SMTNL1A8MU46 457 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 NR1I2O75469 434 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 DDX11Q96FC9 970 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 CLSTN2Q9H4D0 955 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
CCDC78-211ENST00000481804 ZNF771Q7L3S4 317 aaPredicted RBP16.94■□□□□ 0.3
CCDC78-211ENST00000481804 ANKRD7Q92527 254 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 MAP4K1Q92918 833 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 BECN2A8MW95 431 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 EID1Q9Y6B2 187 aa16.94■□□□□ 0.3
CCDC78-211ENST00000481804 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
CCDC78-211ENST00000481804 A0A0D9SFI3 127 aa16.93■□□□□ 0.3
CCDC78-211ENST00000481804 NCBP1Q09161 790 aaKnown RBP16.93■□□□□ 0.3
CCDC78-211ENST00000481804 AIMP1Q12904 312 aaKnown RBP16.93■□□□□ 0.3
CCDC78-211ENST00000481804 COL9A3Q14050 684 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-211ENST00000481804 CTIFO43310 598 aaKnown RBP16.93■□□□□ 0.3
CCDC78-211ENST00000481804 RPS6KB1P23443 525 aa16.93■□□□□ 0.3
CCDC78-211ENST00000481804 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
CCDC78-211ENST00000481804 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-211ENST00000481804 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
CCDC78-211ENST00000481804 JAK2O60674 1132 aa16.92■□□□□ 0.3
CCDC78-211ENST00000481804 ZNF530Q6P9A1 599 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-211ENST00000481804 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
CCDC78-211ENST00000481804 EAF2Q96CJ1 260 aaPredicted RBP16.92■□□□□ 0.3
CCDC78-211ENST00000481804 CACNA1FO60840 1977 aa16.92■□□□□ 0.3
CCDC78-211ENST00000481804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-211ENST00000481804 FILIP1Q7Z7B0 1213 aa16.91■□□□□ 0.3
CCDC78-211ENST00000481804 CACTINQ8WUQ7 758 aaKnown RBP16.91■□□□□ 0.3
CCDC78-211ENST00000481804 BRF1Q92994 677 aa16.91■□□□□ 0.3
CCDC78-211ENST00000481804 FEZ1Q99689 392 aa16.91■□□□□ 0.3
CCDC78-211ENST00000481804 PAXBP1Q9Y5B6 917 aa16.91■□□□□ 0.3
CCDC78-211ENST00000481804 NAA30Q147X3 362 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-211ENST00000481804 TDRD7Q8NHU6 1098 aaKnown RBP16.91■□□□□ 0.3
CCDC78-211ENST00000481804 KCNB2Q92953 911 aa16.91■□□□□ 0.3
CCDC78-211ENST00000481804 TAF6LQ9Y6J9 622 aa16.91■□□□□ 0.3
CCDC78-211ENST00000481804 CEP135Q66GS9 1140 aa16.91■□□□□ 0.3
CCDC78-211ENST00000481804 KIF20AO95235 890 aa16.9■□□□□ 0.3
CCDC78-211ENST00000481804 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
CCDC78-211ENST00000481804 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
CCDC78-211ENST00000481804 HOXB7P09629 217 aa16.9■□□□□ 0.3
CCDC78-211ENST00000481804 ADCY9O60503 1353 aa16.9■□□□□ 0.3
CCDC78-211ENST00000481804 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-211ENST00000481804 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 MTX1Q13505 466 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 OGFRQ9NZT2 677 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms