RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 POM121CA8CG34 1229 aa7.46□□□□□ -1.22
COPA-204ENST00000481522 MTFR1Q15390 333 aa7.46□□□□□ -1.22
COPA-204ENST00000481522 ERICH6Q7L0X2 663 aa7.46□□□□□ -1.22
COPA-204ENST00000481522 ADH7P40394 386 aa7.45□□□□□ -1.22
COPA-204ENST00000481522 C14orf37Q86TY3 774 aa7.45□□□□□ -1.22
COPA-204ENST00000481522 DTX1Q86Y01 620 aa7.45□□□□□ -1.22
COPA-204ENST00000481522 ABCC9O60706 1549 aa7.44□□□□□ -1.22
COPA-204ENST00000481522 TMEM229AB2RXF0 380 aa7.44□□□□□ -1.22
COPA-204ENST00000481522 ZNF865P0CJ78 1059 aaPredicted RBP7.44□□□□□ -1.22
COPA-204ENST00000481522 FNBP4Q8N3X1 1017 aaPredicted RBP7.44□□□□□ -1.22
COPA-204ENST00000481522 ALG2Q9H553 416 aa7.44□□□□□ -1.22
COPA-204ENST00000481522 DBX1A6NMT0 343 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 PRRG2O14669 202 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 LILRB5O75023 590 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 MAP7D1Q3KQU3 841 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 PLPP7Q8NBV4 271 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 GLMNQ92990 594 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 PARP3Q9Y6F1 533 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 USP3Q9Y6I4 520 aa7.43□□□□□ -1.22
COPA-204ENST00000481522 HDGFL1Q5TGJ6 251 aa7.42□□□□□ -1.22
COPA-204ENST00000481522 DZIP1LQ8IYY4 767 aaKnown RBP7.42□□□□□ -1.22
COPA-204ENST00000481522 PIK3CDO00329 1044 aa7.41□□□□□ -1.22
COPA-204ENST00000481522 WNT11O96014 354 aa7.41□□□□□ -1.22
COPA-204ENST00000481522 SKIP12755 728 aa7.41□□□□□ -1.22
COPA-204ENST00000481522 TXLNAP40222 546 aa7.41□□□□□ -1.22
COPA-204ENST00000481522 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
COPA-204ENST00000481522 LRRC69Q6ZNQ3 347 aa7.41□□□□□ -1.22
COPA-204ENST00000481522 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
COPA-204ENST00000481522 SLC30A3Q99726 388 aa7.41□□□□□ -1.22
COPA-204ENST00000481522 SFSWAPQ12872 951 aaKnown RBP7.4□□□□□ -1.22
COPA-204ENST00000481522 ABI1Q8IZP0 508 aa7.4□□□□□ -1.22
COPA-204ENST00000481522 NFATC2IPQ8NCF5 419 aa7.4□□□□□ -1.22
COPA-204ENST00000481522 ADAMTS19Q8TE59 1207 aa7.4□□□□□ -1.22
COPA-204ENST00000481522 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
COPA-204ENST00000481522 IGLV1-40P01703 118 aa7.39□□□□□ -1.23
COPA-204ENST00000481522 EML3Q32P44 896 aa7.39□□□□□ -1.23
COPA-204ENST00000481522 ZDHHC13Q8IUH4 622 aa7.39□□□□□ -1.23
COPA-204ENST00000481522 JAG2Q9Y219 1238 aa7.39□□□□□ -1.23
COPA-204ENST00000481522 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
COPA-204ENST00000481522 USP17L5A8MUK1 530 aa7.38□□□□□ -1.23
COPA-204ENST00000481522 BACH1O14867 736 aa7.38□□□□□ -1.23
COPA-204ENST00000481522 SPEM2Q0P670 501 aa7.38□□□□□ -1.23
COPA-204ENST00000481522 L3MBTL2Q969R5 705 aa7.38□□□□□ -1.23
COPA-204ENST00000481522 ASIC4Q96FT7 647 aa7.38□□□□□ -1.23
COPA-204ENST00000481522 ZMYND15Q9H091 742 aa7.38□□□□□ -1.23
COPA-204ENST00000481522 LMTK3Q96Q04 1460 aa7.37□□□□□ -1.23
COPA-204ENST00000481522 EML1O00423 815 aa7.37□□□□□ -1.23
COPA-204ENST00000481522 BUD31P41223 144 aaPredicted RBP7.37□□□□□ -1.23
COPA-204ENST00000481522 NCOA4Q13772 614 aa7.37□□□□□ -1.23
COPA-204ENST00000481522 INTS5Q6P9B9 1019 aaKnown RBP7.37□□□□□ -1.23
COPA-204ENST00000481522 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
COPA-204ENST00000481522 ZDHHC1Q8WTX9 485 aa7.37□□□□□ -1.23
COPA-204ENST00000481522 UCN2Q96RP3 112 aa7.37□□□□□ -1.23
COPA-204ENST00000481522 SCHIP1Q9P0W5 487 aaPredicted RBP7.37□□□□□ -1.23
COPA-204ENST00000481522 ATP9BO43861 1147 aa7.36□□□□□ -1.23
COPA-204ENST00000481522 LZTS3O60299 673 aaPredicted RBP7.36□□□□□ -1.23
COPA-204ENST00000481522 NOS2P35228 1153 aa7.36□□□□□ -1.23
COPA-204ENST00000481522 TEAD4Q15561 434 aa7.36□□□□□ -1.23
COPA-204ENST00000481522 ZNF124Q15973 351 aa7.36□□□□□ -1.23
COPA-204ENST00000481522 ZNF777Q9ULD5 760 aaPredicted RBP7.36□□□□□ -1.23
COPA-204ENST00000481522 TIMELESSQ9UNS1 1208 aa7.36□□□□□ -1.23
COPA-204ENST00000481522 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
COPA-204ENST00000481522 PCDHGA11Q9Y5H2 935 aa7.36□□□□□ -1.23
COPA-204ENST00000481522 USP17L3A6NCW0 530 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 USP17L4A6NCW7 530 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 GSC2O15499 205 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 ZNF648Q5T619 568 aaPredicted RBP7.35□□□□□ -1.23
COPA-204ENST00000481522 USP17L2Q6R6M4 530 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 USP17L1Q7RTZ2 530 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 RAB44Q7Z6P3 723 aaPredicted RBP7.35□□□□□ -1.23
COPA-204ENST00000481522 DEPDC4Q8N2C3 294 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 C7orf43Q8WVR3 580 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
COPA-204ENST00000481522 PTCD1O75127 700 aaKnown RBP7.34□□□□□ -1.23
COPA-204ENST00000481522 ITGB5P18084 799 aa7.34□□□□□ -1.23
COPA-204ENST00000481522 PSME1Q06323 249 aa7.34□□□□□ -1.23
COPA-204ENST00000481522 DMRTC2Q8IXT2 367 aaPredicted RBP7.34□□□□□ -1.23
COPA-204ENST00000481522 AFF1P51825 1210 aaKnown RBP7.33□□□□□ -1.24
COPA-204ENST00000481522 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
COPA-204ENST00000481522 TRIM50Q86XT4 487 aa7.33□□□□□ -1.24
COPA-204ENST00000481522 PLEKHM2Q8IWE5 1019 aa7.33□□□□□ -1.24
COPA-204ENST00000481522 B8ZZF3 427 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 GRIK1P39086 918 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 GTF2IP78347 998 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 LILRA6Q6PI73 481 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 RHPN1Q8TCX5 695 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 CEP63Q96MT8 703 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 JPH1Q9HDC5 661 aaPredicted RBP7.32□□□□□ -1.24
COPA-204ENST00000481522 BRD7Q9NPI1 651 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 KCNH4Q9UQ05 1017 aa7.32□□□□□ -1.24
COPA-204ENST00000481522 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
COPA-204ENST00000481522 PRR19A6NJB7 356 aa7.31□□□□□ -1.24
COPA-204ENST00000481522 ATP1A2P50993 1020 aa7.31□□□□□ -1.24
COPA-204ENST00000481522 KCNQ4P56696 695 aa7.31□□□□□ -1.24
COPA-204ENST00000481522 KRTAP1-1Q07627 177 aa7.31□□□□□ -1.24
COPA-204ENST00000481522 SLC9A9Q8IVB4 645 aa7.31□□□□□ -1.24
COPA-204ENST00000481522 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.31□□□□□ -1.24
COPA-204ENST00000481522 PPP1R12CQ9BZL4 782 aa7.31□□□□□ -1.24
COPA-204ENST00000481522 ZNF358Q9NW07 568 aa7.31□□□□□ -1.24
COPA-204ENST00000481522 ANKIB1Q9P2G1 1089 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms