RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-211ENST00000481492 HSP90AB3PQ58FF7 597 aa26.57■■□□□ 1.84
PTPN18-211ENST00000481492 PRPF40BQ6NWY9 871 aaKnown RBP26.57■■□□□ 1.84
PTPN18-211ENST00000481492 PPP1R42Q7Z4L9 355 aa26.57■■□□□ 1.84
PTPN18-211ENST00000481492 C7orf43Q8WVR3 580 aa26.57■■□□□ 1.84
PTPN18-211ENST00000481492 CNKSR1Q969H4 720 aa26.57■■□□□ 1.84
PTPN18-211ENST00000481492 ISCA1Q9BUE6 129 aa26.57■■□□□ 1.84
PTPN18-211ENST00000481492 SLX4Q8IY92 1834 aa26.56■■□□□ 1.84
PTPN18-211ENST00000481492 NFKBIEO00221 500 aa26.56■■□□□ 1.84
PTPN18-211ENST00000481492 RASSF7Q02833 373 aa26.56■■□□□ 1.84
PTPN18-211ENST00000481492 SLC10A5Q5PT55 438 aa26.56■■□□□ 1.84
PTPN18-211ENST00000481492 C9orf131Q5VYM1 1079 aa26.56■■□□□ 1.84
PTPN18-211ENST00000481492 UTP14AQ9BVJ6 771 aaKnown RBP26.56■■□□□ 1.84
PTPN18-211ENST00000481492 EXOSC9Q06265 439 aaKnown RBP26.55■■□□□ 1.84
PTPN18-211ENST00000481492 ATP5J2-PTCD1G3V325 749 aa26.54■■□□□ 1.84
PTPN18-211ENST00000481492 VAMP4O75379 141 aa26.54■■□□□ 1.84
PTPN18-211ENST00000481492 RIC1Q4ADV7 1423 aa26.53■■□□□ 1.84
PTPN18-211ENST00000481492 OLFM4Q6UX06 510 aa26.52■■□□□ 1.84
PTPN18-211ENST00000481492 G2E3Q7L622 706 aa26.52■■□□□ 1.84
PTPN18-211ENST00000481492 ANKRD36CQ5JPF3 1778 aa26.52■■□□□ 1.84
PTPN18-211ENST00000481492 GOLGA2Q08379 1002 aa26.51■■□□□ 1.83
PTPN18-211ENST00000481492 TRIM28Q13263 835 aaKnown RBP26.51■■□□□ 1.83
PTPN18-211ENST00000481492 HOXA10P31260 410 aaPredicted RBP26.5■■□□□ 1.83
PTPN18-211ENST00000481492 RIC3Q7Z5B4 369 aa26.5■■□□□ 1.83
PTPN18-211ENST00000481492 MIER1Q8N108 512 aa26.5■■□□□ 1.83
PTPN18-211ENST00000481492 TRMT112Q9UI30 125 aaKnown RBP26.5■■□□□ 1.83
PTPN18-211ENST00000481492 HCLS1P14317 486 aaPredicted RBP26.49■■□□□ 1.83
PTPN18-211ENST00000481492 DIEXFQ68CQ4 756 aaKnown RBP26.49■■□□□ 1.83
PTPN18-211ENST00000481492 ZNF526Q8TF50 670 aaPredicted RBP26.49■■□□□ 1.83
PTPN18-211ENST00000481492 CHMP4AQ9BY43 222 aa26.49■■□□□ 1.83
PTPN18-211ENST00000481492 RNF181Q9P0P0 153 aa26.49■■□□□ 1.83
PTPN18-211ENST00000481492 SBF1O95248 1867 aa26.48■■□□□ 1.83
PTPN18-211ENST00000481492 SLC4A2P04920 1241 aa26.48■■□□□ 1.83
PTPN18-211ENST00000481492 SLC51AQ86UW1 340 aa26.48■■□□□ 1.83
PTPN18-211ENST00000481492 RNF123Q5XPI4 1314 aa26.47■■□□□ 1.83
PTPN18-211ENST00000481492 LMNB1P20700 586 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 ALDH1B1P30837 517 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 FAM89AQ96GI7 184 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 NLRP3Q96P20 1036 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 MYH16Q9H6N6 1097 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 ARFGEF2Q9Y6D5 1785 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 SH3TC1Q8TE82 1336 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 MYD88Q99836 296 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 METTL22Q9BUU2 404 aaPredicted RBP26.46■■□□□ 1.83
PTPN18-211ENST00000481492 STK31Q9BXU1 1019 aa26.46■■□□□ 1.83
PTPN18-211ENST00000481492 CACNA1SQ13698 1873 aa26.45■■□□□ 1.82
PTPN18-211ENST00000481492 PI4KAP2A4QPH2 592 aa26.45■■□□□ 1.82
PTPN18-211ENST00000481492 PI4KAP1Q8N8J0 262 aa26.45■■□□□ 1.82
PTPN18-211ENST00000481492 RPGRQ92834 1020 aaKnown RBP26.45■■□□□ 1.82
PTPN18-211ENST00000481492 CRAMP1Q96RY5 1269 aa26.45■■□□□ 1.82
PTPN18-211ENST00000481492 MAP3K2Q9Y2U5 619 aa26.45■■□□□ 1.82
PTPN18-211ENST00000481492 KSR2Q6VAB6 950 aa26.44■■□□□ 1.82
PTPN18-211ENST00000481492 GPBP1L1Q9HC44 474 aaPredicted RBP26.44■■□□□ 1.82
PTPN18-211ENST00000481492 FER1L6Q2WGJ9 1857 aa26.43■■□□□ 1.82
PTPN18-211ENST00000481492 LTBP3Q9NS15 1303 aa26.43■■□□□ 1.82
PTPN18-211ENST00000481492 DDX58O95786 925 aaKnown RBP26.42■■□□□ 1.82
PTPN18-211ENST00000481492 IGKV5-2P06315 115 aa26.42■■□□□ 1.82
PTPN18-211ENST00000481492 RTL5Q5HYW3 569 aaPredicted RBP26.42■■□□□ 1.82
PTPN18-211ENST00000481492 RBM17Q96I25 401 aaKnown RBP26.42■■□□□ 1.82
PTPN18-211ENST00000481492 SNED1Q8TER0 1413 aa26.42■■□□□ 1.82
PTPN18-211ENST00000481492 CCDC93Q567U6 631 aa26.41■■□□□ 1.82
PTPN18-211ENST00000481492 SOGA3Q5TF21 947 aa26.41■■□□□ 1.82
PTPN18-211ENST00000481492 CDCA7LQ96GN5 454 aa26.41■■□□□ 1.82
PTPN18-211ENST00000481492 SLFN5Q08AF3 891 aa26.4■■□□□ 1.82
PTPN18-211ENST00000481492 FLIIQ13045 1269 aa26.4■■□□□ 1.82
PTPN18-211ENST00000481492 CCDC191Q8NCU4 936 aa26.4■■□□□ 1.82
PTPN18-211ENST00000481492 JARID2Q92833 1246 aaPredicted RBP26.4■■□□□ 1.82
PTPN18-211ENST00000481492 TAOK3Q9H2K8 898 aa26.4■■□□□ 1.82
PTPN18-211ENST00000481492 ZBTB38Q8NAP3 1195 aaPredicted RBP26.38■■□□□ 1.81
PTPN18-211ENST00000481492 LAMB2P55268 1798 aa26.38■■□□□ 1.81
PTPN18-211ENST00000481492 ABCC4O15439 1325 aa26.38■■□□□ 1.81
PTPN18-211ENST00000481492 IRS4O14654 1257 aaPredicted RBP26.37■■□□□ 1.81
PTPN18-211ENST00000481492 KIF3CO14782 793 aa26.37■■□□□ 1.81
PTPN18-211ENST00000481492 NMRK2Q9NPI5 230 aa26.37■■□□□ 1.81
PTPN18-211ENST00000481492 CCDC88AQ3V6T2 1871 aa26.37■■□□□ 1.81
PTPN18-211ENST00000481492 DDX60Q8IY21 1712 aaKnown RBP26.37■■□□□ 1.81
PTPN18-211ENST00000481492 E9PSI1 815 aa26.36■■□□□ 1.81
PTPN18-211ENST00000481492 HSPA6P17066 643 aa26.36■■□□□ 1.81
PTPN18-211ENST00000481492 FKBP4Q02790 459 aaKnown RBP eCLIP26.36■■□□□ 1.81
PTPN18-211ENST00000481492 SF3B3Q15393 1217 aaKnown RBP26.36■■□□□ 1.81
PTPN18-211ENST00000481492 TRMT2AQ8IZ69 625 aaKnown RBP26.36■■□□□ 1.81
PTPN18-211ENST00000481492 RTKN2Q8IZC4 609 aa26.36■■□□□ 1.81
PTPN18-211ENST00000481492 CWC25Q9NXE8 425 aaPredicted RBP26.36■■□□□ 1.81
PTPN18-211ENST00000481492 PPEF1O14829 653 aaPredicted RBP26.35■■□□□ 1.81
PTPN18-211ENST00000481492 PCCAP05165 728 aaPredicted RBP26.35■■□□□ 1.81
PTPN18-211ENST00000481492 CWF19L2Q2TBE0 894 aaKnown RBP26.35■■□□□ 1.81
PTPN18-211ENST00000481492 ZNF277Q9NRM2 450 aaPredicted RBP26.35■■□□□ 1.81
PTPN18-211ENST00000481492 FKBP5Q13451 457 aaPredicted RBP26.33■■□□□ 1.81
PTPN18-211ENST00000481492 ZC3H4Q9UPT8 1303 aaKnown RBP26.33■■□□□ 1.81
PTPN18-211ENST00000481492 NEURL1BA8MQ27 555 aa26.33■■□□□ 1.8
PTPN18-211ENST00000481492 CC2D2BQ6DHV5 1058 aa26.33■■□□□ 1.8
PTPN18-211ENST00000481492 ATP6V0A2Q9Y487 856 aa26.33■■□□□ 1.8
PTPN18-211ENST00000481492 COL4A1P02462 1669 aa26.32■■□□□ 1.8
PTPN18-211ENST00000481492 BBOX1O75936 387 aa26.32■■□□□ 1.8
PTPN18-211ENST00000481492 DDX46Q7L014 1031 aaKnown RBP26.32■■□□□ 1.8
PTPN18-211ENST00000481492 DNAAF4Q8WXU2 420 aa26.32■■□□□ 1.8
PTPN18-211ENST00000481492 GLTPD2A6NH11 291 aa26.31■■□□□ 1.8
PTPN18-211ENST00000481492 F6X3S4 739 aa26.31■■□□□ 1.8
PTPN18-211ENST00000481492 GRAPQ13588 217 aa26.31■■□□□ 1.8
PTPN18-211ENST00000481492 GRAPLQ8TC17 118 aaPredicted RBP26.31■■□□□ 1.8
PTPN18-211ENST00000481492 PSMD1Q99460 953 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 245.8 ms