RNA–Protein interactions for RNA: ENST00000481143.2

DMD-225, Transcript of dystrophin, humanhuman

TSL 3

Gene DMD, Length 621 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-225ENST00000481143 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
DMD-225ENST00000481143 SRGNP10124 158 aa12.41□□□□□ -0.42
DMD-225ENST00000481143 TSPYL6Q8N831 410 aa12.41□□□□□ -0.42
DMD-225ENST00000481143 SBF1O95248 1867 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 KLRG2A4D1S0 409 aaPredicted RBP12.4□□□□□ -0.42
DMD-225ENST00000481143 E9PSI1 815 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 NTSR2O95665 410 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 HSP90B1P14625 803 aaKnown RBP12.4□□□□□ -0.42
DMD-225ENST00000481143 ALDH1B1P30837 517 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 SUSD4Q5VX71 490 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
DMD-225ENST00000481143 TRMT112Q9UI30 125 aaKnown RBP12.4□□□□□ -0.42
DMD-225ENST00000481143 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
DMD-225ENST00000481143 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
DMD-225ENST00000481143 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 ZNF521Q96K83 1311 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 SLX4Q8IY92 1834 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 LAMB2P55268 1798 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
DMD-225ENST00000481143 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
DMD-225ENST00000481143 FER1L6Q2WGJ9 1857 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 CCDC88AQ3V6T2 1871 aa12.39□□□□□ -0.43
DMD-225ENST00000481143 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
DMD-225ENST00000481143 CRY2Q49AN0 593 aa12.38□□□□□ -0.43
DMD-225ENST00000481143 PRPF40BQ6NWY9 871 aaKnown RBP12.38□□□□□ -0.43
DMD-225ENST00000481143 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
DMD-225ENST00000481143 DICER1Q9UPY3 1922 aaKnown RBP12.37□□□□□ -0.43
DMD-225ENST00000481143 TRIM28Q13263 835 aaKnown RBP12.37□□□□□ -0.43
DMD-225ENST00000481143 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
DMD-225ENST00000481143 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
DMD-225ENST00000481143 RBM17Q96I25 401 aaKnown RBP12.37□□□□□ -0.43
DMD-225ENST00000481143 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
DMD-225ENST00000481143 ADCY9O60503 1353 aa12.37□□□□□ -0.43
DMD-225ENST00000481143 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
DMD-225ENST00000481143 ATP5J2-PTCD1G3V325 749 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 C21orf2O43822 256 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 VAMP4O75379 141 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 FLIIQ13045 1269 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
DMD-225ENST00000481143 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 SLC10A5Q5PT55 438 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 MIER1Q8N108 512 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 CCDC191Q8NCU4 936 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 MYD88Q99836 296 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
DMD-225ENST00000481143 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
DMD-225ENST00000481143 MAP3K2Q9Y2U5 619 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 MYH3P11055 1940 aa12.36□□□□□ -0.43
DMD-225ENST00000481143 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
DMD-225ENST00000481143 TIAM2Q8IVF5 1701 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 LMNB1P20700 586 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 C9orf131Q5VYM1 1079 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 ZNF428Q96B54 188 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 CWC25Q9NXE8 425 aaPredicted RBP12.35□□□□□ -0.43
DMD-225ENST00000481143 RNF181Q9P0P0 153 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
DMD-225ENST00000481143 LTBP3Q9NS15 1303 aa12.35□□□□□ -0.43
DMD-225ENST00000481143 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
DMD-225ENST00000481143 HOXA10P31260 410 aaPredicted RBP12.34□□□□□ -0.43
DMD-225ENST00000481143 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
DMD-225ENST00000481143 RTKN2Q8IZC4 609 aa12.34□□□□□ -0.43
DMD-225ENST00000481143 ZBTB38Q8NAP3 1195 aaPredicted RBP12.34□□□□□ -0.43
DMD-225ENST00000481143 CRAMP1Q96RY5 1269 aa12.34□□□□□ -0.43
DMD-225ENST00000481143 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
DMD-225ENST00000481143 CT47B1P0C2W7 299 aaPredicted RBP12.33□□□□□ -0.44
DMD-225ENST00000481143 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
DMD-225ENST00000481143 RASSF7Q02833 373 aa12.33□□□□□ -0.44
DMD-225ENST00000481143 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
DMD-225ENST00000481143 SLFN5Q08AF3 891 aa12.33□□□□□ -0.44
DMD-225ENST00000481143 NFKBIEO00221 500 aa12.32□□□□□ -0.44
DMD-225ENST00000481143 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
DMD-225ENST00000481143 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
DMD-225ENST00000481143 PCCAP05165 728 aaPredicted RBP12.32□□□□□ -0.44
DMD-225ENST00000481143 TMC4Q7Z404 712 aa12.32□□□□□ -0.44
DMD-225ENST00000481143 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
DMD-225ENST00000481143 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
DMD-225ENST00000481143 BBOX1O75936 387 aa12.31□□□□□ -0.44
DMD-225ENST00000481143 FKBP4Q02790 459 aaKnown RBP eCLIP12.31□□□□□ -0.44
DMD-225ENST00000481143 G2E3Q7L622 706 aa12.31□□□□□ -0.44
DMD-225ENST00000481143 ABCC4O15439 1325 aa12.31□□□□□ -0.44
DMD-225ENST00000481143 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
DMD-225ENST00000481143 CDHR2Q9BYE9 1310 aa12.31□□□□□ -0.44
DMD-225ENST00000481143 PDE8AO60658 829 aa12.3□□□□□ -0.44
DMD-225ENST00000481143 HNRNPUQ00839 825 aaKnown RBP eCLIP12.3□□□□□ -0.44
DMD-225ENST00000481143 GRAPQ13588 217 aa12.3□□□□□ -0.44
DMD-225ENST00000481143 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
DMD-225ENST00000481143 CCDC152Q4G0S7 254 aa12.3□□□□□ -0.44
DMD-225ENST00000481143 RTL5Q5HYW3 569 aaPredicted RBP12.3□□□□□ -0.44
DMD-225ENST00000481143 LINS1Q8NG48 757 aa12.3□□□□□ -0.44
DMD-225ENST00000481143 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms