RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ZNF385CQ66K41 422 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-216ENST00000481048 SVOPQ8N4V2 548 aa9.65□□□□□ -0.86
LRCH3-216ENST00000481048 KCTD17Q8N5Z5 321 aa9.65□□□□□ -0.86
LRCH3-216ENST00000481048 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
LRCH3-216ENST00000481048 MST1RQ04912 1400 aa9.65□□□□□ -0.87
LRCH3-216ENST00000481048 ADGRL3Q9HAR2 1447 aa9.65□□□□□ -0.87
LRCH3-216ENST00000481048 TMEM151AQ8N4L1 468 aa9.64□□□□□ -0.87
LRCH3-216ENST00000481048 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
LRCH3-216ENST00000481048 PRAG1Q86YV5 1406 aa9.64□□□□□ -0.87
LRCH3-216ENST00000481048 NHSL1Q5SYE7 1610 aa9.64□□□□□ -0.87
LRCH3-216ENST00000481048 PPLO60437 1756 aa9.63□□□□□ -0.87
LRCH3-216ENST00000481048 ASXL1Q8IXJ9 1541 aa9.63□□□□□ -0.87
LRCH3-216ENST00000481048 SETD1AO15047 1707 aaKnown RBP9.63□□□□□ -0.87
LRCH3-216ENST00000481048 SLURP2P0DP57 97 aa9.63□□□□□ -0.87
LRCH3-216ENST00000481048 RASSF7Q02833 373 aa9.63□□□□□ -0.87
LRCH3-216ENST00000481048 LYSMD3Q7Z3D4 306 aa9.63□□□□□ -0.87
LRCH3-216ENST00000481048 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
LRCH3-216ENST00000481048 PTCH1Q13635 1447 aa9.63□□□□□ -0.87
LRCH3-216ENST00000481048 RNF225M0QZC1 329 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-216ENST00000481048 GDF11O95390 407 aa9.62□□□□□ -0.87
LRCH3-216ENST00000481048 SEPT12Q8IYM1 358 aa9.62□□□□□ -0.87
LRCH3-216ENST00000481048 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-216ENST00000481048 LRP6O75581 1613 aa9.62□□□□□ -0.87
LRCH3-216ENST00000481048 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
LRCH3-216ENST00000481048 LAMC1P11047 1609 aa9.61□□□□□ -0.87
LRCH3-216ENST00000481048 RXRBP28702 533 aa9.61□□□□□ -0.87
LRCH3-216ENST00000481048 TMEM259Q4ZIN3 620 aa9.61□□□□□ -0.87
LRCH3-216ENST00000481048 ZBBXA8MT70 800 aa9.6□□□□□ -0.87
LRCH3-216ENST00000481048 GIGYF1O75420 1035 aaPredicted RBP9.6□□□□□ -0.87
LRCH3-216ENST00000481048 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
LRCH3-216ENST00000481048 PCDHB9Q9Y5E1 797 aa9.6□□□□□ -0.87
LRCH3-216ENST00000481048 C1orf167Q5SNV9 1468 aa9.59□□□□□ -0.87
LRCH3-216ENST00000481048 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-216ENST00000481048 RNF144AP50876 292 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-216ENST00000481048 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
LRCH3-216ENST00000481048 CUEDC1Q9NWM3 386 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-216ENST00000481048 ANKRD30BQ9BXX2 1392 aa9.59□□□□□ -0.87
LRCH3-216ENST00000481048 CCDC144AA2RUR9 1427 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 ATP5J2-PTCD1G3V325 749 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 ARHGEF15O94989 841 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 ADAMTS2O95450 1211 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 RHOQP17081 205 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 MPHOSPH9Q99550 1183 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 PNPLA6Q8IY17 1366 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
LRCH3-216ENST00000481048 AFF2P51816 1311 aa9.57□□□□□ -0.88
LRCH3-216ENST00000481048 MEN1O00255 615 aa9.57□□□□□ -0.88
LRCH3-216ENST00000481048 FBXO45P0C2W1 286 aa9.57□□□□□ -0.88
LRCH3-216ENST00000481048 MARSP56192 900 aaKnown RBP9.56□□□□□ -0.88
LRCH3-216ENST00000481048 RBM6P78332 1123 aaKnown RBP9.56□□□□□ -0.88
LRCH3-216ENST00000481048 DDX17Q92841 729 aaKnown RBP9.56□□□□□ -0.88
LRCH3-216ENST00000481048 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
LRCH3-216ENST00000481048 GJD4Q96KN9 370 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-216ENST00000481048 ORAI2Q96SN7 254 aa9.56□□□□□ -0.88
LRCH3-216ENST00000481048 QTRT2Q9H974 415 aaKnown RBP9.56□□□□□ -0.88
LRCH3-216ENST00000481048 IFT172Q9UG01 1749 aa9.56□□□□□ -0.88
LRCH3-216ENST00000481048 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
LRCH3-216ENST00000481048 LRPPRCP42704 1394 aaKnown RBP9.55□□□□□ -0.88
LRCH3-216ENST00000481048 ABCC11Q96J66 1382 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 IRS1P35568 1242 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 SRSF11Q05519 484 aaKnown RBP9.55□□□□□ -0.88
LRCH3-216ENST00000481048 RGL3Q3MIN7 710 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 NGLY1Q96IV0 654 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 C8orf37Q96NL8 207 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 TECPR2O15040 1411 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 SPATA31E1Q6ZUB1 1445 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 ADGRF5Q8IZF2 1346 aa9.55□□□□□ -0.88
LRCH3-216ENST00000481048 CDC42BPGQ6DT37 1551 aa9.54□□□□□ -0.88
LRCH3-216ENST00000481048 A0A1W2PRU2 124 aa9.54□□□□□ -0.88
LRCH3-216ENST00000481048 GAS6Q14393 721 aa9.54□□□□□ -0.88
LRCH3-216ENST00000481048 SUZ12Q15022 739 aaKnown RBP9.54□□□□□ -0.88
LRCH3-216ENST00000481048 KNDC1Q76NI1 1749 aa9.53□□□□□ -0.88
LRCH3-216ENST00000481048 COL22A1Q8NFW1 1626 aaPredicted RBP9.53□□□□□ -0.88
LRCH3-216ENST00000481048 ESCO1Q5FWF5 840 aa9.53□□□□□ -0.88
LRCH3-216ENST00000481048 RIPOR1Q6ZS17 1223 aa9.53□□□□□ -0.88
LRCH3-216ENST00000481048 CCDC125Q86Z20 511 aa9.53□□□□□ -0.88
LRCH3-216ENST00000481048 FNBP4Q8N3X1 1017 aaPredicted RBP9.53□□□□□ -0.88
LRCH3-216ENST00000481048 ZNF837Q96EG3 531 aaPredicted RBP9.53□□□□□ -0.88
LRCH3-216ENST00000481048 GPC1P35052 558 aa9.52□□□□□ -0.89
LRCH3-216ENST00000481048 ERVK-9P63128 1117 aa9.52□□□□□ -0.89
LRCH3-216ENST00000481048 MAP3K10Q02779 954 aa9.52□□□□□ -0.89
LRCH3-216ENST00000481048 NEUROD2Q15784 382 aa9.52□□□□□ -0.89
LRCH3-216ENST00000481048 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
LRCH3-216ENST00000481048 CC2D2BQ6DHV5 1058 aa9.52□□□□□ -0.89
LRCH3-216ENST00000481048 TRIM22Q8IYM9 498 aa9.52□□□□□ -0.89
LRCH3-216ENST00000481048 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
LRCH3-216ENST00000481048 MARF1Q9Y4F3 1742 aaKnown RBP9.52□□□□□ -0.89
LRCH3-216ENST00000481048 PIK3C2GO75747 1445 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 LOC100996750A0A140TA64 210 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 FOXO3O43524 673 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 POU4F2Q12837 409 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 DBN1Q16643 649 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 FOXR1Q6PIV2 292 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 WAPLQ7Z5K2 1190 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 SCARF2Q96GP6 870 aaPredicted RBP9.51□□□□□ -0.89
LRCH3-216ENST00000481048 GMCL1Q96IK5 515 aa9.51□□□□□ -0.89
LRCH3-216ENST00000481048 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms