RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 IBTKQ9P2D0 1353 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 NFKBIEO00221 500 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 KIF3CO14782 793 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 SYNE4Q8N205 404 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 C8orf58Q8NAV2 365 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 NMRK2Q9NPI5 230 aa11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-206ENST00000480750 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
SRGAP3-206ENST00000480750 TSPYL6Q8N831 410 aa11.79□□□□□ -0.52
SRGAP3-206ENST00000480750 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-206ENST00000480750 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
SRGAP3-206ENST00000480750 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
SRGAP3-206ENST00000480750 CEP350Q5VT06 3117 aa11.79□□□□□ -0.52
SRGAP3-206ENST00000480750 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 TOMM70O94826 608 aa11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 NTSR2O95665 410 aa11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 CHMP4AQ9BY43 222 aa11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 TMX4Q9H1E5 349 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 RRAGCQ9HB90 399 aa11.78□□□□□ -0.52
SRGAP3-206ENST00000480750 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.52
SRGAP3-206ENST00000480750 GOLGA2Q08379 1002 aa11.77□□□□□ -0.53
SRGAP3-206ENST00000480750 TCIRG1Q13488 830 aa11.77□□□□□ -0.53
SRGAP3-206ENST00000480750 ANKRD13DQ6ZTN6 518 aa11.77□□□□□ -0.53
SRGAP3-206ENST00000480750 PHAXQ9H814 394 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-206ENST00000480750 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-206ENST00000480750 RNF123Q5XPI4 1314 aa11.77□□□□□ -0.53
SRGAP3-206ENST00000480750 LTBP3Q9NS15 1303 aa11.77□□□□□ -0.53
SRGAP3-206ENST00000480750 TAF1P21675 1872 aa11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 WWC1Q8IX03 1113 aa11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 RTKN2Q8IZC4 609 aa11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 PLBD2Q8NHP8 589 aa11.76□□□□□ -0.53
SRGAP3-206ENST00000480750 DDX60Q8IY21 1712 aaKnown RBP11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 HCLS1P14317 486 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 HSPA6P17066 643 aa11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 CCDC30Q5VVM6 783 aa11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 NLRP10Q86W26 655 aa11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 JARID2Q92833 1246 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 SH3TC1Q8TE82 1336 aa11.75□□□□□ -0.53
SRGAP3-206ENST00000480750 WDR90Q96KV7 1748 aa11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 PPEF1O14829 653 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 VEGFAP15692 232 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 C7orf43Q8WVR3 580 aa11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 SCN4AP35499 1836 aa11.74□□□□□ -0.53
SRGAP3-206ENST00000480750 MYH3P11055 1940 aa11.73□□□□□ -0.53
SRGAP3-206ENST00000480750 HOXA10P31260 410 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-206ENST00000480750 DDX46Q7L014 1031 aaKnown RBP11.73□□□□□ -0.53
SRGAP3-206ENST00000480750 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
SRGAP3-206ENST00000480750 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
SRGAP3-206ENST00000480750 GRIPAP1Q4V328 841 aa11.72□□□□□ -0.53
SRGAP3-206ENST00000480750 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
SRGAP3-206ENST00000480750 G2E3Q7L622 706 aa11.72□□□□□ -0.53
SRGAP3-206ENST00000480750 JDP2Q8WYK2 163 aa11.72□□□□□ -0.53
SRGAP3-206ENST00000480750 ABCC4O15439 1325 aa11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 IL16Q14005 1332 aa11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 FSTL1Q12841 308 aa11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 TWISTNBQ3B726 338 aaPredicted RBP11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 FAM89AQ96GI7 184 aa11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 PSMD1Q99460 953 aa11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 MYD88Q99836 296 aa11.71□□□□□ -0.53
SRGAP3-206ENST00000480750 DDNO94850 711 aaPredicted RBP11.7□□□□□ -0.54
SRGAP3-206ENST00000480750 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
SRGAP3-206ENST00000480750 APLP1P51693 650 aa11.7□□□□□ -0.54
SRGAP3-206ENST00000480750 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
SRGAP3-206ENST00000480750 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
SRGAP3-206ENST00000480750 ISCA1Q9BUE6 129 aa11.7□□□□□ -0.54
SRGAP3-206ENST00000480750 FANCIQ9NVI1 1328 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 IQCA1LA6NCM1 817 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 BBOX1O75936 387 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 EIF6P56537 245 aaKnown RBP11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 NEXNQ0ZGT2 675 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 GRAPQ13588 217 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 WDR63Q8IWG1 891 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 GRAPLQ8TC17 118 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
SRGAP3-206ENST00000480750 SPEF2Q9C093 1822 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms