RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 LRP10Q7Z4F1 713 aa14.83□□□□□ -0.04
CCM2-213ENST00000480658 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
CCM2-213ENST00000480658 CRAMP1Q96RY5 1269 aa14.83□□□□□ -0.04
CCM2-213ENST00000480658 PSMD1Q99460 953 aa14.83□□□□□ -0.04
CCM2-213ENST00000480658 NMRK2Q9NPI5 230 aa14.83□□□□□ -0.04
CCM2-213ENST00000480658 DICER1Q9UPY3 1922 aaKnown RBP14.83□□□□□ -0.04
CCM2-213ENST00000480658 UBN2Q6ZU65 1347 aa14.83□□□□□ -0.04
CCM2-213ENST00000480658 WDR90Q96KV7 1748 aa14.83□□□□□ -0.04
CCM2-213ENST00000480658 APAF1O14727 1248 aa14.82□□□□□ -0.04
CCM2-213ENST00000480658 GPTP24298 496 aa14.82□□□□□ -0.04
CCM2-213ENST00000480658 COPS6Q7L5N1 327 aa14.82□□□□□ -0.04
CCM2-213ENST00000480658 TMC4Q7Z404 712 aa14.82□□□□□ -0.04
CCM2-213ENST00000480658 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
CCM2-213ENST00000480658 ABCC12Q96J65 1359 aa14.82□□□□□ -0.04
CCM2-213ENST00000480658 CACNA1SQ13698 1873 aa14.82□□□□□ -0.04
CCM2-213ENST00000480658 SLX4Q8IY92 1834 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 ZNF853P0CG23 659 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 SLC10A5Q5PT55 438 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 SUSD4Q5VX71 490 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 NUTM1Q86Y26 1132 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 C7orf43Q8WVR3 580 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 VPS33BQ9H267 617 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 MBIPQ9NS73 344 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 CHPF2Q9P2E5 772 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 SH3TC1Q8TE82 1336 aa14.81□□□□□ -0.04
CCM2-213ENST00000480658 DDX58O95786 925 aaKnown RBP14.8□□□□□ -0.04
CCM2-213ENST00000480658 GOLGA2Q08379 1002 aa14.8□□□□□ -0.04
CCM2-213ENST00000480658 TCIRG1Q13488 830 aa14.8□□□□□ -0.04
CCM2-213ENST00000480658 DUSP27Q5VZP5 1158 aa14.8□□□□□ -0.04
CCM2-213ENST00000480658 ANKRD13DQ6ZTN6 518 aa14.8□□□□□ -0.04
CCM2-213ENST00000480658 XAGE3Q8WTP9 111 aa14.8□□□□□ -0.04
CCM2-213ENST00000480658 JDP2Q8WYK2 163 aa14.8□□□□□ -0.04
CCM2-213ENST00000480658 RRAGCQ9HB90 399 aa14.8□□□□□ -0.04
CCM2-213ENST00000480658 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
CCM2-213ENST00000480658 AIMP1Q12904 312 aaKnown RBP14.79□□□□□ -0.04
CCM2-213ENST00000480658 IL16Q14005 1332 aa14.79□□□□□ -0.04
CCM2-213ENST00000480658 CCDC30Q5VVM6 783 aa14.79□□□□□ -0.04
CCM2-213ENST00000480658 PPEF1O14829 653 aaPredicted RBP14.78□□□□□ -0.04
CCM2-213ENST00000480658 IARSP41252 1262 aaKnown RBP14.78□□□□□ -0.04
CCM2-213ENST00000480658 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
CCM2-213ENST00000480658 NLRP10Q86W26 655 aa14.78□□□□□ -0.04
CCM2-213ENST00000480658 SUPT20HQ8NEM7 779 aa14.78□□□□□ -0.04
CCM2-213ENST00000480658 MRS2Q9HD23 443 aa14.78□□□□□ -0.04
CCM2-213ENST00000480658 TRMT112Q9UI30 125 aaKnown RBP14.78□□□□□ -0.04
CCM2-213ENST00000480658 BBOX1O75936 387 aa14.77□□□□□ -0.05
CCM2-213ENST00000480658 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.05
CCM2-213ENST00000480658 NECTIN2Q92692 538 aa14.77□□□□□ -0.05
CCM2-213ENST00000480658 L3MBTL3Q96JM7 780 aaPredicted RBP14.77□□□□□ -0.05
CCM2-213ENST00000480658 PRELPP51888 382 aa14.76□□□□□ -0.05
CCM2-213ENST00000480658 TRIM28Q13263 835 aaKnown RBP14.76□□□□□ -0.05
CCM2-213ENST00000480658 STK31Q9BXU1 1019 aa14.76□□□□□ -0.05
CCM2-213ENST00000480658 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
CCM2-213ENST00000480658 SCN4AP35499 1836 aa14.76□□□□□ -0.05
CCM2-213ENST00000480658 ANXA1P04083 346 aa14.75□□□□□ -0.05
CCM2-213ENST00000480658 RIC3Q7Z5B4 369 aa14.75□□□□□ -0.05
CCM2-213ENST00000480658 GPC2Q8N158 579 aa14.75□□□□□ -0.05
CCM2-213ENST00000480658 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
CCM2-213ENST00000480658 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
CCM2-213ENST00000480658 EIF6P56537 245 aaKnown RBP14.74□□□□□ -0.05
CCM2-213ENST00000480658 KRT24Q2M2I5 525 aa14.74□□□□□ -0.05
CCM2-213ENST00000480658 PNMA8AQ86V59 439 aaPredicted RBP14.74□□□□□ -0.05
CCM2-213ENST00000480658 SYNE4Q8N205 404 aa14.74□□□□□ -0.05
CCM2-213ENST00000480658 ZNF277Q9NRM2 450 aaPredicted RBP14.74□□□□□ -0.05
CCM2-213ENST00000480658 ABCC4O15439 1325 aa14.73□□□□□ -0.05
CCM2-213ENST00000480658 FZD9O00144 591 aa14.73□□□□□ -0.05
CCM2-213ENST00000480658 GRAPQ13588 217 aa14.73□□□□□ -0.05
CCM2-213ENST00000480658 WWC1Q8IX03 1113 aa14.73□□□□□ -0.05
CCM2-213ENST00000480658 CCDC191Q8NCU4 936 aa14.73□□□□□ -0.05
CCM2-213ENST00000480658 GRAPLQ8TC17 118 aaPredicted RBP14.73□□□□□ -0.05
CCM2-213ENST00000480658 ISCA1Q9BUE6 129 aa14.73□□□□□ -0.05
CCM2-213ENST00000480658 LAMB2P55268 1798 aa14.73□□□□□ -0.05
CCM2-213ENST00000480658 NEXNQ0ZGT2 675 aa14.72□□□□□ -0.05
CCM2-213ENST00000480658 LDHDQ86WU2 507 aa14.72□□□□□ -0.05
CCM2-213ENST00000480658 WDR63Q8IWG1 891 aa14.72□□□□□ -0.05
CCM2-213ENST00000480658 SP8Q8IXZ3 490 aa14.72□□□□□ -0.05
CCM2-213ENST00000480658 NIM1KQ8IY84 436 aa14.72□□□□□ -0.05
CCM2-213ENST00000480658 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
CCM2-213ENST00000480658 CDHR2Q9BYE9 1310 aa14.71□□□□□ -0.05
CCM2-213ENST00000480658 LMOD1P29536 600 aaPredicted RBP14.71□□□□□ -0.05
CCM2-213ENST00000480658 DPP8Q6V1X1 898 aaPredicted RBP14.71□□□□□ -0.05
CCM2-213ENST00000480658 ZBTB38Q8NAP3 1195 aaPredicted RBP14.71□□□□□ -0.05
CCM2-213ENST00000480658 RTFDC1Q9BY42 306 aaPredicted RBP14.71□□□□□ -0.05
CCM2-213ENST00000480658 HACL1Q9UJ83 578 aa14.71□□□□□ -0.05
CCM2-213ENST00000480658 DDNO94850 711 aaPredicted RBP14.7□□□□□ -0.06
CCM2-213ENST00000480658 SF3B3Q15393 1217 aaKnown RBP14.7□□□□□ -0.06
CCM2-213ENST00000480658 TWISTNBQ3B726 338 aaPredicted RBP14.7□□□□□ -0.06
CCM2-213ENST00000480658 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
CCM2-213ENST00000480658 PPIP5K2O43314 1243 aa14.69□□□□□ -0.06
CCM2-213ENST00000480658 HCLS1P14317 486 aaPredicted RBP14.69□□□□□ -0.06
CCM2-213ENST00000480658 MPNDQ8N594 471 aa14.69□□□□□ -0.06
CCM2-213ENST00000480658 MYH16Q9H6N6 1097 aa14.69□□□□□ -0.06
CCM2-213ENST00000480658 CWC25Q9NXE8 425 aaPredicted RBP14.69□□□□□ -0.06
CCM2-213ENST00000480658 LRRC37AA6NMS7 1700 aa14.69□□□□□ -0.06
CCM2-213ENST00000480658 IRS4O14654 1257 aaPredicted RBP14.68□□□□□ -0.06
CCM2-213ENST00000480658 CCDC152Q4G0S7 254 aa14.68□□□□□ -0.06
CCM2-213ENST00000480658 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
CCM2-213ENST00000480658 METTL22Q9BUU2 404 aaPredicted RBP14.68□□□□□ -0.06
CCM2-213ENST00000480658 TAF1DQ9H5J8 278 aaPredicted RBP14.68□□□□□ -0.06
CCM2-213ENST00000480658 DDX60Q8IY21 1712 aaKnown RBP14.68□□□□□ -0.06
CCM2-213ENST00000480658 CEP350Q5VT06 3117 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms