RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 TNNQ9UQP3 1299 aa17.1■□□□□ 0.33
SNRNP200-204ENST00000480615 NTSR2O95665 410 aa17.1■□□□□ 0.33
SNRNP200-204ENST00000480615 ST5P78524 1137 aa17.1■□□□□ 0.33
SNRNP200-204ENST00000480615 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
SNRNP200-204ENST00000480615 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
SNRNP200-204ENST00000480615 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
SNRNP200-204ENST00000480615 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
SNRNP200-204ENST00000480615 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
SNRNP200-204ENST00000480615 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
SNRNP200-204ENST00000480615 NLGN2Q8NFZ4 835 aa17.09■□□□□ 0.33
SNRNP200-204ENST00000480615 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
SNRNP200-204ENST00000480615 ANKRD31Q8N7Z5 1873 aa17.08■□□□□ 0.33
SNRNP200-204ENST00000480615 ABCC12Q96J65 1359 aa17.08■□□□□ 0.33
SNRNP200-204ENST00000480615 PLIN1O60240 522 aa17.08■□□□□ 0.32
SNRNP200-204ENST00000480615 BEND3Q5T5X7 828 aa17.08■□□□□ 0.32
SNRNP200-204ENST00000480615 CCDC191Q8NCU4 936 aa17.08■□□□□ 0.32
SNRNP200-204ENST00000480615 C10orf71Q711Q0 1435 aa17.08■□□□□ 0.32
SNRNP200-204ENST00000480615 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 TRIM27P14373 513 aa17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 SRCIN1Q9C0H9 1055 aa17.07■□□□□ 0.32
SNRNP200-204ENST00000480615 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
SNRNP200-204ENST00000480615 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
SNRNP200-204ENST00000480615 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
SNRNP200-204ENST00000480615 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
SNRNP200-204ENST00000480615 CHRNA5P30532 468 aa17.06■□□□□ 0.32
SNRNP200-204ENST00000480615 GCKRQ14397 625 aa17.06■□□□□ 0.32
SNRNP200-204ENST00000480615 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
SNRNP200-204ENST00000480615 UTRNP46939 3433 aa17.05■□□□□ 0.32
SNRNP200-204ENST00000480615 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
SNRNP200-204ENST00000480615 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
SNRNP200-204ENST00000480615 IBTKQ9P2D0 1353 aaPredicted RBP17.05■□□□□ 0.32
SNRNP200-204ENST00000480615 C3orf67Q6ZVT6 689 aa17.04■□□□□ 0.32
SNRNP200-204ENST00000480615 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
SNRNP200-204ENST00000480615 ZBTB38Q8NAP3 1195 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-204ENST00000480615 BRIP1Q9BX63 1249 aa17.04■□□□□ 0.32
SNRNP200-204ENST00000480615 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-204ENST00000480615 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
SNRNP200-204ENST00000480615 IRS4O14654 1257 aaPredicted RBP17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 DPEP1P16444 411 aa17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 C2CD5Q86YS7 1000 aa17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 C9orf78Q9NZ63 289 aaPredicted RBP17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 PXDNLA1KZ92 1463 aa17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 KIAA1551Q9HCM1 1747 aa17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 LAMB2P55268 1798 aa17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 PDE6BP35913 854 aa17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
SNRNP200-204ENST00000480615 PCCAP05165 728 aaPredicted RBP17.02■□□□□ 0.31
SNRNP200-204ENST00000480615 RLBP1P12271 317 aa17.02■□□□□ 0.31
SNRNP200-204ENST00000480615 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.31
SNRNP200-204ENST00000480615 PANK1Q8TE04 598 aa17.02■□□□□ 0.31
SNRNP200-204ENST00000480615 ABCC4O15439 1325 aa17.02■□□□□ 0.31
SNRNP200-204ENST00000480615 H0YIN7 160 aa17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 ALDH1L1O75891 902 aa17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 CCT4P50991 539 aaKnown RBP17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 ZNF622Q969S3 477 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 CCDC85AQ96PX6 553 aaPredicted RBP17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
SNRNP200-204ENST00000480615 GRM8O00222 908 aa17■□□□□ 0.31
SNRNP200-204ENST00000480615 TGFB2P61812 414 aa17■□□□□ 0.31
SNRNP200-204ENST00000480615 NLRP3Q96P20 1036 aa17■□□□□ 0.31
SNRNP200-204ENST00000480615 H7C1W4 665 aa16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 ITPRIPQ8IWB1 547 aa16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 TAF1P21675 1872 aa16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 DLEC1Q9Y238 1755 aa16.99■□□□□ 0.31
SNRNP200-204ENST00000480615 MYH3P11055 1940 aa16.98■□□□□ 0.31
SNRNP200-204ENST00000480615 SRGNP10124 158 aa16.98■□□□□ 0.31
SNRNP200-204ENST00000480615 KCNA3P22001 575 aa16.98■□□□□ 0.31
SNRNP200-204ENST00000480615 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
SNRNP200-204ENST00000480615 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.98■□□□□ 0.31
SNRNP200-204ENST00000480615 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
SNRNP200-204ENST00000480615 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
SNRNP200-204ENST00000480615 CASP7P55210 303 aa16.97■□□□□ 0.31
SNRNP200-204ENST00000480615 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
SNRNP200-204ENST00000480615 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
SNRNP200-204ENST00000480615 PDE8AO60658 829 aa16.96■□□□□ 0.31
SNRNP200-204ENST00000480615 RRP1P56182 461 aaKnown RBP16.96■□□□□ 0.31
SNRNP200-204ENST00000480615 MEIS3Q99687 375 aa16.96■□□□□ 0.31
SNRNP200-204ENST00000480615 PIM2Q9P1W9 311 aa16.96■□□□□ 0.31
SNRNP200-204ENST00000480615 BCS1LQ9Y276 419 aa16.96■□□□□ 0.31
SNRNP200-204ENST00000480615 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
SNRNP200-204ENST00000480615 CTSWP56202 376 aa16.96■□□□□ 0.3
SNRNP200-204ENST00000480615 CRY2Q49AN0 593 aa16.96■□□□□ 0.3
SNRNP200-204ENST00000480615 MASTLQ96GX5 879 aa16.96■□□□□ 0.3
SNRNP200-204ENST00000480615 SUCLG2Q96I99 432 aa16.96■□□□□ 0.3
SNRNP200-204ENST00000480615 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.3
SNRNP200-204ENST00000480615 SUPT16HQ9Y5B9 1047 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms