RNA–Protein interactions for RNA: ENST00000480612.1

LCA5L-216, Transcript of LCA5L, lebercilin like, humanhuman

TSL 1 (best)

Gene LCA5L, Length 772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-216ENST00000480612 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.77
LCA5L-216ENST00000480612 FLAD1Q8NFF5 587 aa10.21□□□□□ -0.77
LCA5L-216ENST00000480612 SYT17Q9BSW7 474 aa10.21□□□□□ -0.77
LCA5L-216ENST00000480612 ATG3Q9NT62 314 aa10.21□□□□□ -0.77
LCA5L-216ENST00000480612 GNPATO15228 680 aa10.2□□□□□ -0.78
LCA5L-216ENST00000480612 KDM6AO15550 1401 aaPredicted RBP10.2□□□□□ -0.78
LCA5L-216ENST00000480612 PTCD1O75127 700 aaKnown RBP10.2□□□□□ -0.78
LCA5L-216ENST00000480612 KDRP35968 1356 aa10.2□□□□□ -0.78
LCA5L-216ENST00000480612 AKAP4Q5JQC9 854 aa10.2□□□□□ -0.78
LCA5L-216ENST00000480612 SMIM5Q71RC9 77 aa10.2□□□□□ -0.78
LCA5L-216ENST00000480612 ADGRG1Q9Y653 693 aa10.2□□□□□ -0.78
LCA5L-216ENST00000480612 C4BP0C0L5 1744 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 QSER1Q2KHR3 1735 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
LCA5L-216ENST00000480612 RGS20O76081 388 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 APLP1P51693 650 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 ITPK1Q13572 414 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 FAM161AQ3B820 660 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
LCA5L-216ENST00000480612 NFATC2IPQ8NCF5 419 aa10.19□□□□□ -0.78
LCA5L-216ENST00000480612 MTHFSDQ2M296 383 aaKnown RBP10.18□□□□□ -0.78
LCA5L-216ENST00000480612 NUDCQ9Y266 331 aa10.18□□□□□ -0.78
LCA5L-216ENST00000480612 TAF1LQ8IZX4 1826 aa10.18□□□□□ -0.78
LCA5L-216ENST00000480612 FCHSD2O94868 740 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 YY1P25490 414 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 SSFA2P28290 1259 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 PPP2R1AP30153 589 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 GPR162Q16538 588 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 AMIGO3Q86WK7 504 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 MTRQ99707 1265 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 LGR6Q9HBX8 967 aa10.17□□□□□ -0.78
LCA5L-216ENST00000480612 GPR37O15354 613 aa10.16□□□□□ -0.78
LCA5L-216ENST00000480612 RNMTO43148 476 aaKnown RBP10.16□□□□□ -0.78
LCA5L-216ENST00000480612 U2AF1L5P0DN76 240 aaPredicted RBP10.16□□□□□ -0.78
LCA5L-216ENST00000480612 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.78
LCA5L-216ENST00000480612 SLF2Q8IX21 1173 aa10.16□□□□□ -0.78
LCA5L-216ENST00000480612 GAS2L2Q8NHY3 880 aa10.16□□□□□ -0.78
LCA5L-216ENST00000480612 SLC52A2Q9HAB3 445 aa10.16□□□□□ -0.78
LCA5L-216ENST00000480612 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
LCA5L-216ENST00000480612 COL3A1P02461 1466 aaPredicted RBP10.16□□□□□ -0.78
LCA5L-216ENST00000480612 PRKAR2BP31323 418 aa10.15□□□□□ -0.78
LCA5L-216ENST00000480612 SLC39A6Q13433 755 aa10.15□□□□□ -0.78
LCA5L-216ENST00000480612 TRAPPC3LQ5T215 181 aa10.15□□□□□ -0.78
LCA5L-216ENST00000480612 SLC4A9Q96Q91 983 aa10.15□□□□□ -0.78
LCA5L-216ENST00000480612 MAP3K5Q99683 1374 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 GNAT3A8MTJ3 354 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 DNAJB2P25686 324 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 RFC4P35249 363 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 TEFQ10587 303 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 NLGN2Q8NFZ4 835 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 TMEM134Q9H6X4 195 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 UBR3Q6ZT12 1888 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 SCN11AQ9UI33 1791 aa10.14□□□□□ -0.79
LCA5L-216ENST00000480612 CNTNAP4Q9C0A0 1308 aa10.13□□□□□ -0.79
LCA5L-216ENST00000480612 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
LCA5L-216ENST00000480612 RBM46Q8TBY0 533 aaKnown RBP10.13□□□□□ -0.79
LCA5L-216ENST00000480612 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
LCA5L-216ENST00000480612 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
LCA5L-216ENST00000480612 NEFMP07197 916 aa10.12□□□□□ -0.79
LCA5L-216ENST00000480612 DDX10Q13206 875 aaKnown RBP10.12□□□□□ -0.79
LCA5L-216ENST00000480612 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
LCA5L-216ENST00000480612 DNAJC10Q8IXB1 793 aa10.12□□□□□ -0.79
LCA5L-216ENST00000480612 RTF1Q92541 710 aaKnown RBP10.12□□□□□ -0.79
LCA5L-216ENST00000480612 PHACTR3Q96KR7 559 aa10.12□□□□□ -0.79
LCA5L-216ENST00000480612 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
LCA5L-216ENST00000480612 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
LCA5L-216ENST00000480612 UTRNP46939 3433 aa10.11□□□□□ -0.79
LCA5L-216ENST00000480612 MMP10P09238 476 aa10.11□□□□□ -0.79
LCA5L-216ENST00000480612 HIC1Q14526 733 aa10.11□□□□□ -0.79
LCA5L-216ENST00000480612 ZNF516Q92618 1163 aa10.11□□□□□ -0.79
LCA5L-216ENST00000480612 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
LCA5L-216ENST00000480612 FECHP22830 423 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 NLGN1Q8N2Q7 840 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 NECTIN2Q92692 538 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 SRP68Q9UHB9 627 aaKnown RBP10.1□□□□□ -0.79
LCA5L-216ENST00000480612 CD2APQ9Y5K6 639 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 COL24A1Q17RW2 1714 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 MRC1P22897 1456 aa10.1□□□□□ -0.79
LCA5L-216ENST00000480612 VIRMAQ69YN4 1812 aaKnown RBP10.1□□□□□ -0.79
LCA5L-216ENST00000480612 GOLGB1Q14789 3259 aaKnown RBP10.09□□□□□ -0.79
LCA5L-216ENST00000480612 ZPR1O75312 459 aa10.09□□□□□ -0.79
LCA5L-216ENST00000480612 CANXP27824 592 aaKnown RBP10.09□□□□□ -0.79
LCA5L-216ENST00000480612 PXYLP1Q8TE99 480 aa10.09□□□□□ -0.79
LCA5L-216ENST00000480612 ZNF330Q9Y3S2 320 aaPredicted RBP10.09□□□□□ -0.79
LCA5L-216ENST00000480612 PARP3Q9Y6F1 533 aa10.09□□□□□ -0.79
LCA5L-216ENST00000480612 COL5A3P25940 1745 aaPredicted RBP10.09□□□□□ -0.79
LCA5L-216ENST00000480612 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
LCA5L-216ENST00000480612 BTBD11A6QL63 1104 aa10.08□□□□□ -0.8
LCA5L-216ENST00000480612 STARD3NLO95772 234 aa10.08□□□□□ -0.8
LCA5L-216ENST00000480612 GYS1P13807 737 aa10.08□□□□□ -0.8
LCA5L-216ENST00000480612 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
LCA5L-216ENST00000480612 INTS5Q6P9B9 1019 aaKnown RBP10.08□□□□□ -0.8
LCA5L-216ENST00000480612 MCM10Q7L590 875 aa10.08□□□□□ -0.8
LCA5L-216ENST00000480612 ZNF831Q5JPB2 1677 aa10.08□□□□□ -0.8
LCA5L-216ENST00000480612 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
LCA5L-216ENST00000480612 TJP1Q07157 1748 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms