RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 SNED1Q8TER0 1413 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 CCDC85CA6NKD9 419 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 CYP4F22Q6NT55 531 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 NUTM1Q86Y26 1132 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 LARGE2Q8N3Y3 721 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 CFAP53Q96M91 514 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 NYXQ9GZU5 481 aa15.1■□□□□ 0.01
TTC28-206ENST00000480563 TRAF5O00463 557 aa15.09■□□□□ 0.01
TTC28-206ENST00000480563 SCNN1DP51172 638 aa15.09■□□□□ 0.01
TTC28-206ENST00000480563 CST9Q5W186 159 aa15.09■□□□□ 0.01
TTC28-206ENST00000480563 USP50Q70EL3 339 aaPredicted RBP15.09■□□□□ 0.01
TTC28-206ENST00000480563 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
TTC28-206ENST00000480563 RPGRQ92834 1020 aaKnown RBP15.09■□□□□ 0.01
TTC28-206ENST00000480563 NUDCQ9Y266 331 aa15.09■□□□□ 0.01
TTC28-206ENST00000480563 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
TTC28-206ENST00000480563 HOXA10P31260 410 aaPredicted RBP15.08■□□□□ 0
TTC28-206ENST00000480563 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
TTC28-206ENST00000480563 MLLT1Q03111 559 aaPredicted RBP15.08■□□□□ 0
TTC28-206ENST00000480563 TAF7Q15545 349 aaPredicted RBP15.08■□□□□ 0
TTC28-206ENST00000480563 GRIPAP1Q4V328 841 aa15.08■□□□□ 0
TTC28-206ENST00000480563 CCER1Q8TC90 406 aaPredicted RBP15.08■□□□□ 0
TTC28-206ENST00000480563 ABCC12Q96J65 1359 aa15.08■□□□□ 0
TTC28-206ENST00000480563 COL4A5P29400 1685 aa15.07■□□□□ 0
TTC28-206ENST00000480563 ERVV-1B6SEH8 477 aa15.07■□□□□ 0
TTC28-206ENST00000480563 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
TTC28-206ENST00000480563 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
TTC28-206ENST00000480563 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
TTC28-206ENST00000480563 TLL2Q9Y6L7 1015 aa15.07■□□□□ 0
TTC28-206ENST00000480563 MAP2K2P36507 400 aa15.06■□□□□ 0
TTC28-206ENST00000480563 RGS19P49795 217 aa15.06■□□□□ 0
TTC28-206ENST00000480563 NIM1KQ8IY84 436 aa15.06■□□□□ 0
TTC28-206ENST00000480563 RBM17Q96I25 401 aaKnown RBP15.06■□□□□ 0
TTC28-206ENST00000480563 CRAMP1Q96RY5 1269 aa15.06■□□□□ 0
TTC28-206ENST00000480563 TSKSQ9UJT2 592 aa15.06■□□□□ 0
TTC28-206ENST00000480563 PPEF1O14829 653 aaPredicted RBP15.05■□□□□ -0
TTC28-206ENST00000480563 AOC2O75106 756 aa15.05■□□□□ -0
TTC28-206ENST00000480563 GPTP24298 496 aa15.05■□□□□ -0
TTC28-206ENST00000480563 SUSD4Q5VX71 490 aa15.05■□□□□ -0
TTC28-206ENST00000480563 SLC51AQ86UW1 340 aa15.05■□□□□ -0
TTC28-206ENST00000480563 RRP7AQ9Y3A4 280 aaKnown RBP15.05■□□□□ -0
TTC28-206ENST00000480563 MAP3K15Q6ZN16 1313 aa15.05■□□□□ -0
TTC28-206ENST00000480563 LTBP1Q14766 1721 aa15.05■□□□□ -0
TTC28-206ENST00000480563 KIF6Q6ZMV9 814 aa15.04■□□□□ -0
TTC28-206ENST00000480563 TTLL7Q6ZT98 887 aa15.04■□□□□ -0
TTC28-206ENST00000480563 ADARB2Q9NS39 739 aaKnown RBP15.04■□□□□ -0
TTC28-206ENST00000480563 GPRC5DQ9NZD1 345 aa15.04■□□□□ -0
TTC28-206ENST00000480563 UBN2Q6ZU65 1347 aa15.03■□□□□ -0
TTC28-206ENST00000480563 PPIP5K2O43314 1243 aa15.03■□□□□ -0
TTC28-206ENST00000480563 MYL6BP14649 208 aa15.03■□□□□ -0
TTC28-206ENST00000480563 AOC3Q16853 763 aa15.03■□□□□ -0
TTC28-206ENST00000480563 SAPCD2Q86UD0 394 aa15.03■□□□□ -0
TTC28-206ENST00000480563 TMX4Q9H1E5 349 aaPredicted RBP15.03■□□□□ -0
TTC28-206ENST00000480563 ZBTB3Q9H5J0 574 aa15.03■□□□□ -0
TTC28-206ENST00000480563 CELF2O95319 508 aaKnown RBP15.02■□□□□ -0
TTC28-206ENST00000480563 C3orf67Q6ZVT6 689 aa15.02■□□□□ -0
TTC28-206ENST00000480563 ZNF34Q8IZ26 560 aa15.02■□□□□ -0
TTC28-206ENST00000480563 VPS33BQ9H267 617 aa15.02■□□□□ -0
TTC28-206ENST00000480563 ZNRF3Q9ULT6 936 aa15.02■□□□□ -0
TTC28-206ENST00000480563 RIC1Q4ADV7 1423 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 IBTKQ9P2D0 1353 aaPredicted RBP15.01□□□□□ -0.01
TTC28-206ENST00000480563 CA12O43570 354 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 NTSR2O95665 410 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 CXCL9Q07325 125 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 PNISRQ8TF01 805 aaKnown RBP15.01□□□□□ -0.01
TTC28-206ENST00000480563 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 GLIS2Q9BZE0 524 aaPredicted RBP15.01□□□□□ -0.01
TTC28-206ENST00000480563 ATP6V0A2Q9Y487 856 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 THSD7BQ9C0I4 1608 aa15.01□□□□□ -0.01
TTC28-206ENST00000480563 PPP2R1AP30153 589 aa15□□□□□ -0.01
TTC28-206ENST00000480563 GMPSP49915 693 aaPredicted RBP15□□□□□ -0.01
TTC28-206ENST00000480563 EIF4A1P60842 406 aaKnown RBP15□□□□□ -0.01
TTC28-206ENST00000480563 PPP1R42Q7Z4L9 355 aa15□□□□□ -0.01
TTC28-206ENST00000480563 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
TTC28-206ENST00000480563 HHIPL1Q96JK4 782 aa15□□□□□ -0.01
TTC28-206ENST00000480563 MCOLN1Q9GZU1 580 aa15□□□□□ -0.01
TTC28-206ENST00000480563 PGAP2Q9UHJ9 254 aa15□□□□□ -0.01
TTC28-206ENST00000480563 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
TTC28-206ENST00000480563 GIGYF2Q6Y7W6 1299 aaKnown RBP14.99□□□□□ -0.01
TTC28-206ENST00000480563 PARP10Q53GL7 1025 aa14.98□□□□□ -0.01
TTC28-206ENST00000480563 SLC10A5Q5PT55 438 aa14.98□□□□□ -0.01
TTC28-206ENST00000480563 ZC3H15Q8WU90 426 aaKnown RBP14.98□□□□□ -0.01
TTC28-206ENST00000480563 RTFDC1Q9BY42 306 aaPredicted RBP14.98□□□□□ -0.01
TTC28-206ENST00000480563 ZNF408Q9H9D4 720 aa14.98□□□□□ -0.01
TTC28-206ENST00000480563 HIRAP54198 1017 aaPredicted RBP14.97□□□□□ -0.01
TTC28-206ENST00000480563 DGKZQ13574 1117 aa14.97□□□□□ -0.01
TTC28-206ENST00000480563 TNIP1Q15025 636 aa14.97□□□□□ -0.01
TTC28-206ENST00000480563 CIAPIN1Q6FI81 312 aa14.97□□□□□ -0.01
TTC28-206ENST00000480563 DPP8Q6V1X1 898 aaPredicted RBP14.97□□□□□ -0.01
TTC28-206ENST00000480563 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
TTC28-206ENST00000480563 BCL2L13Q9BXK5 485 aa14.97□□□□□ -0.01
TTC28-206ENST00000480563 TRPM7Q96QT4 1865 aa14.97□□□□□ -0.01
TTC28-206ENST00000480563 ABCC4O15439 1325 aa14.96□□□□□ -0.01
TTC28-206ENST00000480563 BBOX1O75936 387 aa14.96□□□□□ -0.01
TTC28-206ENST00000480563 RAD17O75943 681 aa14.96□□□□□ -0.01
TTC28-206ENST00000480563 NEFMP07197 916 aa14.96□□□□□ -0.01
TTC28-206ENST00000480563 SP8Q8IXZ3 490 aa14.96□□□□□ -0.01
TTC28-206ENST00000480563 MPNDQ8N594 471 aa14.96□□□□□ -0.01
TTC28-206ENST00000480563 UTP14AQ9BVJ6 771 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms