RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SCNN1DP51172 638 aa9.38□□□□□ -0.91
COL17A1-205ENST00000480127 CST9Q5W186 159 aa9.38□□□□□ -0.91
COL17A1-205ENST00000480127 SLC51AQ86UW1 340 aa9.38□□□□□ -0.91
COL17A1-205ENST00000480127 JDP2Q8WYK2 163 aa9.38□□□□□ -0.91
COL17A1-205ENST00000480127 CAPNS2Q96L46 248 aa9.38□□□□□ -0.91
COL17A1-205ENST00000480127 GJA3Q9Y6H8 435 aa9.38□□□□□ -0.91
COL17A1-205ENST00000480127 GTF2E1P29083 439 aaPredicted RBP9.37□□□□□ -0.91
COL17A1-205ENST00000480127 RGS19P49795 217 aa9.37□□□□□ -0.91
COL17A1-205ENST00000480127 EIF6P56537 245 aaKnown RBP9.37□□□□□ -0.91
COL17A1-205ENST00000480127 DCTN1Q14203 1278 aa9.37□□□□□ -0.91
COL17A1-205ENST00000480127 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
COL17A1-205ENST00000480127 CYP4F22Q6NT55 531 aa9.37□□□□□ -0.91
COL17A1-205ENST00000480127 NUTM1Q86Y26 1132 aa9.37□□□□□ -0.91
COL17A1-205ENST00000480127 TRAF5O00463 557 aa9.36□□□□□ -0.91
COL17A1-205ENST00000480127 LMOD1P29536 600 aaPredicted RBP9.36□□□□□ -0.91
COL17A1-205ENST00000480127 HOXA10P31260 410 aaPredicted RBP9.36□□□□□ -0.91
COL17A1-205ENST00000480127 ECE1P42892 770 aa9.36□□□□□ -0.91
COL17A1-205ENST00000480127 GPR101Q96P66 508 aaPredicted RBP9.36□□□□□ -0.91
COL17A1-205ENST00000480127 PNNQ9H307 717 aaKnown RBP9.36□□□□□ -0.91
COL17A1-205ENST00000480127 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
COL17A1-205ENST00000480127 CCDC85CA6NKD9 419 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 ERVV-1B6SEH8 477 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 HTATSF1O43719 755 aaKnown RBP9.35□□□□□ -0.91
COL17A1-205ENST00000480127 PPP2R1AP30153 589 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 RIC1Q4ADV7 1423 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 USP50Q70EL3 339 aaPredicted RBP9.35□□□□□ -0.91
COL17A1-205ENST00000480127 LARGE2Q8N3Y3 721 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 NYXQ9GZU5 481 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 MIS18AQ9NYP9 233 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
COL17A1-205ENST00000480127 MAP3K15Q6ZN16 1313 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 UBN2Q6ZU65 1347 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 AOC2O75106 756 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 MAP2K2P36507 400 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 MLLT1Q03111 559 aaPredicted RBP9.34□□□□□ -0.91
COL17A1-205ENST00000480127 GRM1Q13255 1194 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 TAF7Q15545 349 aaPredicted RBP9.34□□□□□ -0.91
COL17A1-205ENST00000480127 GRIPAP1Q4V328 841 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 SUSD4Q5VX71 490 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
COL17A1-205ENST00000480127 NGEFQ8N5V2 710 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 RPGRQ92834 1020 aaKnown RBP9.34□□□□□ -0.91
COL17A1-205ENST00000480127 CRAMP1Q96RY5 1269 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
COL17A1-205ENST00000480127 PPEF1O14829 653 aaPredicted RBP9.33□□□□□ -0.92
COL17A1-205ENST00000480127 GPTP24298 496 aa9.33□□□□□ -0.92
COL17A1-205ENST00000480127 C3orf67Q6ZVT6 689 aa9.33□□□□□ -0.92
COL17A1-205ENST00000480127 SAPCD2Q86UD0 394 aa9.33□□□□□ -0.92
COL17A1-205ENST00000480127 NIM1KQ8IY84 436 aa9.33□□□□□ -0.92
COL17A1-205ENST00000480127 ZNF34Q8IZ26 560 aa9.33□□□□□ -0.92
COL17A1-205ENST00000480127 RBM17Q96I25 401 aaKnown RBP9.33□□□□□ -0.92
COL17A1-205ENST00000480127 ADARB2Q9NS39 739 aaKnown RBP9.33□□□□□ -0.92
COL17A1-205ENST00000480127 GPRC5DQ9NZD1 345 aa9.33□□□□□ -0.92
COL17A1-205ENST00000480127 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
COL17A1-205ENST00000480127 LAMB4A4D0S4 1761 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 TCERG1O14776 1098 aaKnown RBP9.32□□□□□ -0.92
COL17A1-205ENST00000480127 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 NTSR2O95665 410 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 CXCL9Q07325 125 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 AOC3Q16853 763 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 ZBTB3Q9H5J0 574 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 PGAP2Q9UHJ9 254 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 RRP7AQ9Y3A4 280 aaKnown RBP9.32□□□□□ -0.92
COL17A1-205ENST00000480127 TRPM7Q96QT4 1865 aa9.32□□□□□ -0.92
COL17A1-205ENST00000480127 NUP98P52948 1817 aa9.31□□□□□ -0.92
COL17A1-205ENST00000480127 CELF2O95319 508 aaKnown RBP9.31□□□□□ -0.92
COL17A1-205ENST00000480127 MYL6BP14649 208 aa9.31□□□□□ -0.92
COL17A1-205ENST00000480127 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
COL17A1-205ENST00000480127 KIF6Q6ZMV9 814 aa9.31□□□□□ -0.92
COL17A1-205ENST00000480127 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
COL17A1-205ENST00000480127 HHIPL1Q96JK4 782 aa9.31□□□□□ -0.92
COL17A1-205ENST00000480127 RTFDC1Q9BY42 306 aaPredicted RBP9.31□□□□□ -0.92
COL17A1-205ENST00000480127 GLIS2Q9BZE0 524 aaPredicted RBP9.31□□□□□ -0.92
COL17A1-205ENST00000480127 MCOLN1Q9GZU1 580 aa9.31□□□□□ -0.92
COL17A1-205ENST00000480127 VPS33BQ9H267 617 aa9.31□□□□□ -0.92
COL17A1-205ENST00000480127 ATP6V0A2Q9Y487 856 aa9.31□□□□□ -0.92
COL17A1-205ENST00000480127 KDM3BQ7LBC6 1761 aa9.3□□□□□ -0.92
COL17A1-205ENST00000480127 CA12O43570 354 aa9.3□□□□□ -0.92
COL17A1-205ENST00000480127 GMPSP49915 693 aaPredicted RBP9.3□□□□□ -0.92
COL17A1-205ENST00000480127 HIRAP54198 1017 aaPredicted RBP9.3□□□□□ -0.92
COL17A1-205ENST00000480127 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
COL17A1-205ENST00000480127 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
COL17A1-205ENST00000480127 SLC10A5Q5PT55 438 aa9.3□□□□□ -0.92
COL17A1-205ENST00000480127 GIGYF2Q6Y7W6 1299 aaKnown RBP9.3□□□□□ -0.92
COL17A1-205ENST00000480127 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
COL17A1-205ENST00000480127 ZNRF3Q9ULT6 936 aa9.3□□□□□ -0.92
COL17A1-205ENST00000480127 LRP10Q7Z4F1 713 aa9.29□□□□□ -0.92
COL17A1-205ENST00000480127 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
COL17A1-205ENST00000480127 SUPT20HQ8NEM7 779 aa9.29□□□□□ -0.92
COL17A1-205ENST00000480127 ZIC5Q96T25 663 aa9.29□□□□□ -0.92
COL17A1-205ENST00000480127 TMX4Q9H1E5 349 aaPredicted RBP9.29□□□□□ -0.92
COL17A1-205ENST00000480127 ABCC4O15439 1325 aa9.29□□□□□ -0.92
COL17A1-205ENST00000480127 CDHR2Q9BYE9 1310 aa9.29□□□□□ -0.92
COL17A1-205ENST00000480127 SHTN1A0MZ66 631 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 LMOD3Q0VAK6 560 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 KIAA2012Q0VF49 1180 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 DDX10Q13206 875 aaKnown RBP9.28□□□□□ -0.92
COL17A1-205ENST00000480127 NEUROD2Q15784 382 aa9.28□□□□□ -0.92
COL17A1-205ENST00000480127 PARP10Q53GL7 1025 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms