RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 GJB2P29033 226 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 SYKP43405 635 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 WWC2Q6AWC2 1192 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 CEP128Q6ZU80 1094 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 SPATS2Q86XZ4 545 aaKnown RBP7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 SYNJ1O43426 1573 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 KDM4AO75164 1064 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 STAMBPO95630 424 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 STK3Q13188 491 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 SLF2Q8IX21 1173 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 LINS1Q8NG48 757 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 PPFIA3O75145 1194 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 STARD3NLO95772 234 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 TICAM2Q86XR7 235 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 STRN4Q9NRL3 753 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 USP16Q9Y5T5 823 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 THOC2Q8NI27 1593 aaKnown RBP7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 FSD2A1L4K1 749 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 SDSP20132 328 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 NBPF11Q86T75 865 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 SLC12A7Q9Y666 1083 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 ERICH4A6NGS2 130 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 IGHMBP2P38935 993 aaKnown RBP7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 UBASH3AP57075 661 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 TYRO3Q06418 890 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 PDE4CQ08493 712 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 CCDC50Q8IVM0 306 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 CKAP2LQ8IYA6 745 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 DACT1Q9NYF0 836 aa7.05□□□□□ -1.28
PRPF4B-205ENST00000480058 CALML3P27482 149 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 NUP88Q99567 741 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 DNAI1Q9UI46 699 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 TOPBP1Q92547 1522 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 MAGI1Q96QZ7 1491 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 HMGB1P1B2RPK0 211 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 ARHGAP6O43182 974 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 CENPHQ9H3R5 247 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 HSF2BPO75031 334 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 GIGYF1O75420 1035 aaPredicted RBP7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 KIF4AO95239 1232 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 IGHDP01880 384 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 CABP4P57796 275 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 KIF5AQ12840 1032 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 CLUL1Q15846 466 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 C10orf67Q8IYJ2 551 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 SUPT6HQ7KZ85 1726 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 SNAPC4Q5SXM2 1469 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 TNIP1Q15025 636 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 POGZQ7Z3K3 1410 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 ANKS4BQ8N8V4 417 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.289e-7■■■■■ 108.6
PRPF4B-205ENST00000480058 TTF2Q9UNY4 1162 aaKnown RBP7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 CALM1P0DP23 149 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 CALM2P0DP24 149 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 CALM3P0DP25 149 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 ARHGAP25P42331 645 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 CALML4Q96GE6 196 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 SELENOOQ9BVL4 669 aa7.04□□□□□ -1.28
PRPF4B-205ENST00000480058 GSTTP1A0A1W2PQM5 241 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 GOLGA8AA7E2F4 631 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 GOLGA8BA8MQT2 603 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 PER1O15534 1290 aaPredicted RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 CAPN2P17655 700 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 HDXQ7Z353 690 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 NUP133Q8WUM0 1156 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 MTIF2P46199 727 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 MYL5Q02045 173 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 SSRP1Q08945 709 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 PPP2R5EQ16537 467 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 DNAJC21Q5F1R6 531 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 CATIPQ7Z7H3 387 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 PPM1EQ8WY54 764 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 KRT23Q9C075 422 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 CTAGE9A4FU28 777 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 BTBD11A6QL63 1104 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 ATP2A1O14983 1001 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 HLTFQ14527 1009 aaKnown RBP eCLIP7.03□□□□□ -1.289e-7■■□□□ 11.9
PRPF4B-205ENST00000480058 LRP2BPQ9P2M1 347 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 IL15P40933 162 aaPredicted RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 FOSBP53539 338 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 FKBP4Q02790 459 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 KIAA0753Q2KHM9 967 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 CCDC51Q96ER9 411 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 HDAC9Q9UKV0 1011 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 A0A1B0GUL7 405 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 SPTLC2O15270 562 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 TRHP20396 242 aaPredicted RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 PRIM1P49642 420 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 IFIT5Q13325 482 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 SPAG5Q96R06 1193 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.03□□□□□ -1.281e-7■□□□□ 9.1
PRPF4B-205ENST00000480058 ZNF652Q9Y2D9 606 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 WASLO00401 505 aaPredicted RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 TNNC1P63316 161 aa7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 TDRD12Q587J7 1177 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 RILPL1Q5EBL4 403 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms