RNA–Protein interactions for RNA: ENST00000479901.5

AGAP3-216, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 5 BASIC

Gene AGAP3, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-216	ENST00000479901	HSPA4	P34932	840 aa		32.3	■■■□□ 2.76
AGAP3-216	ENST00000479901	WNK3	Q9BYP7	1800 aa		32.3	■■■□□ 2.76
AGAP3-216	ENST00000479901	IFIT2	P09913	472 aa	Known RBP	32.29	■■■□□ 2.76
AGAP3-216	ENST00000479901	G3BP1	Q13283	466 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
AGAP3-216	ENST00000479901	PALD1	Q9ULE6	856 aa		32.29	■■■□□ 2.76
AGAP3-216	ENST00000479901	PA2G4	Q9UQ80	394 aa	Known RBP	32.29	■■■□□ 2.76
AGAP3-216	ENST00000479901	GOLGA6L22	H0YM25	854 aa		32.28	■■■□□ 2.76
AGAP3-216	ENST00000479901	ZCRB1	Q8TBF4	217 aa	Known RBP	32.28	■■■□□ 2.76
AGAP3-216	ENST00000479901	MYD88	Q99836	296 aa		32.28	■■■□□ 2.76
AGAP3-216	ENST00000479901	ARFGEF2	Q9Y6D5	1785 aa		32.28	■■■□□ 2.76
AGAP3-216	ENST00000479901	FSD2	A1L4K1	749 aa		32.27	■■■□□ 2.76
AGAP3-216	ENST00000479901	ERVV-2	B6SEH9	535 aa		32.27	■■■□□ 2.76
AGAP3-216	ENST00000479901	RAD50	Q92878	1312 aa		32.27	■■■□□ 2.76
AGAP3-216	ENST00000479901	UBR2	Q8IWV8	1755 aa		32.27	■■■□□ 2.76
AGAP3-216	ENST00000479901	SOCS7	O14512	581 aa		32.27	■■■□□ 2.76
AGAP3-216	ENST00000479901	MAP4K4	O95819	1239 aa	Predicted RBP	32.27	■■■□□ 2.76
AGAP3-216	ENST00000479901	AFDN	P55196	1824 aa	Known RBP	32.26	■■■□□ 2.76
AGAP3-216	ENST00000479901	NKX1-1	Q15270	411 aa	Predicted RBP	32.26	■■■□□ 2.75
AGAP3-216	ENST00000479901	IL2RB	P14784	551 aa		32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	CUL4A	Q13619	759 aa		32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	RUFY2	Q8WXA3	655 aa		32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	IL25	Q9H293	177 aa		32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	PAPPA	Q13219	1627 aa		32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	SASH1	O94885	1247 aa		32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	BAG4	O95429	457 aa	Known RBP	32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	ISY1	Q9ULR0	285 aa	Known RBP	32.25	■■■□□ 2.75
AGAP3-216	ENST00000479901	DDB1	Q16531	1140 aa		32.24	■■■□□ 2.75
AGAP3-216	ENST00000479901	TMX3	Q96JJ7	454 aa		32.24	■■■□□ 2.75
AGAP3-216	ENST00000479901	LSG1	Q9H089	658 aa	Known RBP	32.24	■■■□□ 2.75
AGAP3-216	ENST00000479901	GOLGA6L3	A6NEY3	463 aa		32.23	■■■□□ 2.75
AGAP3-216	ENST00000479901	AACS	Q86V21	672 aa		32.23	■■■□□ 2.75
AGAP3-216	ENST00000479901	EVI5L	Q96CN4	794 aa		32.23	■■■□□ 2.75
AGAP3-216	ENST00000479901	PLBD2	Q8NHP8	589 aa		32.22	■■■□□ 2.75
AGAP3-216	ENST00000479901	INTS4	Q96HW7	963 aa	Known RBP	32.22	■■■□□ 2.75
AGAP3-216	ENST00000479901	KIAA1211	Q6ZU35	1233 aa		32.2	■■■□□ 2.75
AGAP3-216	ENST00000479901	ZGPAT	Q8N5A5	531 aa	Known RBP	32.2	■■■□□ 2.75
AGAP3-216	ENST00000479901	DIAPH3	Q9NSV4	1193 aa		32.2	■■■□□ 2.75
AGAP3-216	ENST00000479901	BRPF3	Q9ULD4	1205 aa		32.2	■■■□□ 2.75
AGAP3-216	ENST00000479901	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.2	■■■□□ 2.74
AGAP3-216	ENST00000479901	GZF1	Q9H116	711 aa	Predicted RBP	32.2	■■■□□ 2.74
AGAP3-216	ENST00000479901	COPRS	Q9NQ92	184 aa		32.2	■■■□□ 2.74
AGAP3-216	ENST00000479901	SHANK3	Q9BYB0	1731 aa		32.2	■■■□□ 2.74
AGAP3-216	ENST00000479901	MARCH10	Q8NA82	808 aa	Predicted RBP	32.19	■■■□□ 2.74
AGAP3-216	ENST00000479901	RABL6	Q3YEC7	729 aa	Predicted RBP	32.18	■■■□□ 2.74
AGAP3-216	ENST00000479901	EAF2	Q96CJ1	260 aa	Predicted RBP	32.18	■■■□□ 2.74
AGAP3-216	ENST00000479901	KCP	Q6ZWJ8	1503 aa		32.18	■■■□□ 2.74
AGAP3-216	ENST00000479901	HIP1	O00291	1037 aa		32.18	■■■□□ 2.74
AGAP3-216	ENST00000479901	EXOC5	O00471	708 aa		32.18	■■■□□ 2.74
AGAP3-216	ENST00000479901	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.18	■■■□□ 2.74
AGAP3-216	ENST00000479901	EPHA10	Q5JZY3	1008 aa		32.17	■■■□□ 2.74
AGAP3-216	ENST00000479901	CWC27	Q6UX04	472 aa	Known RBP	32.16	■■■□□ 2.74
AGAP3-216	ENST00000479901	SNX14	Q9Y5W7	946 aa		32.15	■■■□□ 2.74
AGAP3-216	ENST00000479901	RFX5	P48382	616 aa	Predicted RBP	32.14	■■■□□ 2.74
AGAP3-216	ENST00000479901	NUP188	Q5SRE5	1749 aa		32.14	■■■□□ 2.74
AGAP3-216	ENST00000479901	TNS2	Q63HR2	1409 aa		32.14	■■■□□ 2.74
AGAP3-216	ENST00000479901	CASP7	P55210	303 aa		32.13	■■■□□ 2.73
AGAP3-216	ENST00000479901	ZDHHC9	Q9Y397	364 aa		32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	NBPF26	B4DH59	902 aa		32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	PIP4K2A	P48426	406 aa	Predicted RBP	32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	KLHL40	Q2TBA0	621 aa		32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	NBPF14	Q5TI25	921 aa		32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	NBPF10	Q6P3W6	841 aa	Known RBP	32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	NBPF15	Q8N660	670 aa		32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	KCNB2	Q92953	911 aa		32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	SNRK	Q9NRH2	765 aa		32.12	■■■□□ 2.73
AGAP3-216	ENST00000479901	PKP1	Q13835	747 aa		32.11	■■■□□ 2.73
AGAP3-216	ENST00000479901	DDX54	Q8TDD1	881 aa	Known RBP	32.11	■■■□□ 2.73
AGAP3-216	ENST00000479901	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	32.11	■■■□□ 2.73
AGAP3-216	ENST00000479901	MRE11	P49959	708 aa		32.1	■■■□□ 2.73
AGAP3-216	ENST00000479901	UPF3B	Q9BZI7	483 aa	Known RBP	32.1	■■■□□ 2.73
AGAP3-216	ENST00000479901	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.1	■■■□□ 2.73
AGAP3-216	ENST00000479901	SIL1	Q9H173	461 aa		32.1	■■■□□ 2.73
AGAP3-216	ENST00000479901		A0A087WZG4	1122 aa		32.1	■■■□□ 2.73
AGAP3-216	ENST00000479901	UBE3B	Q7Z3V4	1068 aa		32.1	■■■□□ 2.73
AGAP3-216	ENST00000479901	PTPN12	Q05209	780 aa	Known RBP	32.09	■■■□□ 2.73
AGAP3-216	ENST00000479901	TTC14	Q96N46	770 aa		32.08	■■■□□ 2.73
AGAP3-216	ENST00000479901		H7C1W4	665 aa		32.08	■■■□□ 2.73
AGAP3-216	ENST00000479901	XRCC6	P12956	609 aa	Known RBP eCLIP	32.08	■■■□□ 2.73	6e-6	■■■■■ 31.4
AGAP3-216	ENST00000479901	MCTP1	Q6DN14	999 aa		32.07	■■■□□ 2.72
AGAP3-216	ENST00000479901	KLHDC4	Q8TBB5	520 aa		32.07	■■■□□ 2.72
AGAP3-216	ENST00000479901	ATP5J2-PTCD1	G3V325	749 aa		32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	PTCD1	O75127	700 aa	Known RBP	32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	FAM196A	Q6ZSG2	479 aa		32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	PTF1A	Q7RTS3	328 aa		32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	TM6SF1	Q9BZW5	370 aa		32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	TLR7	Q9NYK1	1049 aa	Known RBP	32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	BRD1	O95696	1058 aa		32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	RASEF	Q8IZ41	740 aa		32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	LMBRD1	Q9NUN5	540 aa		32.06	■■■□□ 2.72
AGAP3-216	ENST00000479901	TRIM37	O94972	964 aa		32.05	■■■□□ 2.72
AGAP3-216	ENST00000479901	DDX49	Q9Y6V7	483 aa	Known RBP	32.04	■■■□□ 2.72
AGAP3-216	ENST00000479901	TJP1	Q07157	1748 aa		32.04	■■■□□ 2.72
AGAP3-216	ENST00000479901	CCDC171	Q6TFL3	1326 aa		32.04	■■■□□ 2.72
AGAP3-216	ENST00000479901	TOGARAM1	Q9Y4F4	1720 aa		32.04	■■■□□ 2.72
AGAP3-216	ENST00000479901	ATP5J	P18859	108 aa		32.03	■■■□□ 2.72
AGAP3-216	ENST00000479901	PTH1R	Q03431	593 aa		32.03	■■■□□ 2.72
AGAP3-216	ENST00000479901	CWC25	Q9NXE8	425 aa	Predicted RBP	32.03	■■■□□ 2.72
AGAP3-216	ENST00000479901	TNNI3K	Q59H18	835 aa		32.03	■■■□□ 2.72
AGAP3-216	ENST00000479901	FPGT-TNNI3K	V9GXZ4	949 aa		32.03	■■■□□ 2.72
AGAP3-216	ENST00000479901	RFX7	Q2KHR2	1363 aa		32.02	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 424.3 ms