RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 SLC10A5Q5PT55 438 aa13.61□□□□□ -0.23
SP140-210ENST00000479539 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
SP140-210ENST00000479539 NLRP10Q86W26 655 aa13.61□□□□□ -0.23
SP140-210ENST00000479539 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
SP140-210ENST00000479539 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
SP140-210ENST00000479539 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
SP140-210ENST00000479539 NFKBIEO00221 500 aa13.6□□□□□ -0.23
SP140-210ENST00000479539 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
SP140-210ENST00000479539 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
SP140-210ENST00000479539 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
SP140-210ENST00000479539 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
SP140-210ENST00000479539 BCORQ6W2J9 1755 aa13.6□□□□□ -0.23
SP140-210ENST00000479539 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
SP140-210ENST00000479539 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
SP140-210ENST00000479539 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
SP140-210ENST00000479539 ALDH1B1P30837 517 aa13.59□□□□□ -0.23
SP140-210ENST00000479539 HOXA10P31260 410 aaPredicted RBP13.59□□□□□ -0.23
SP140-210ENST00000479539 PRELPP51888 382 aa13.59□□□□□ -0.23
SP140-210ENST00000479539 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
SP140-210ENST00000479539 SOGA3Q5TF21 947 aa13.59□□□□□ -0.23
SP140-210ENST00000479539 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
SP140-210ENST00000479539 RIC1Q4ADV7 1423 aa13.58□□□□□ -0.24
SP140-210ENST00000479539 LMNB1P20700 586 aa13.58□□□□□ -0.24
SP140-210ENST00000479539 RASSF7Q02833 373 aa13.58□□□□□ -0.24
SP140-210ENST00000479539 GOLGA2Q08379 1002 aa13.58□□□□□ -0.24
SP140-210ENST00000479539 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.24
SP140-210ENST00000479539 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
SP140-210ENST00000479539 ZNF521Q96K83 1311 aa13.58□□□□□ -0.24
SP140-210ENST00000479539 CHD4Q14839 1912 aa13.57□□□□□ -0.24
SP140-210ENST00000479539 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
SP140-210ENST00000479539 NLRP3Q96P20 1036 aa13.57□□□□□ -0.24
SP140-210ENST00000479539 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
SP140-210ENST00000479539 TRMT112Q9UI30 125 aaKnown RBP13.57□□□□□ -0.24
SP140-210ENST00000479539 LTBP3Q9NS15 1303 aa13.57□□□□□ -0.24
SP140-210ENST00000479539 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
SP140-210ENST00000479539 VAMP4O75379 141 aa13.56□□□□□ -0.24
SP140-210ENST00000479539 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
SP140-210ENST00000479539 SYNE4Q8N205 404 aa13.56□□□□□ -0.24
SP140-210ENST00000479539 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
SP140-210ENST00000479539 MYH16Q9H6N6 1097 aa13.56□□□□□ -0.24
SP140-210ENST00000479539 BRCA1P38398 1863 aaKnown RBP13.56□□□□□ -0.24
SP140-210ENST00000479539 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
SP140-210ENST00000479539 DDX58O95786 925 aaKnown RBP13.55□□□□□ -0.24
SP140-210ENST00000479539 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
SP140-210ENST00000479539 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
SP140-210ENST00000479539 ZNF526Q8TF50 670 aaPredicted RBP13.55□□□□□ -0.24
SP140-210ENST00000479539 RPGRQ92834 1020 aaKnown RBP13.55□□□□□ -0.24
SP140-210ENST00000479539 RBM17Q96I25 401 aaKnown RBP13.55□□□□□ -0.24
SP140-210ENST00000479539 TAOK3Q9H2K8 898 aa13.55□□□□□ -0.24
SP140-210ENST00000479539 ZC3H4Q9UPT8 1303 aaKnown RBP13.55□□□□□ -0.24
SP140-210ENST00000479539 TCERG1O14776 1098 aaKnown RBP13.54□□□□□ -0.24
SP140-210ENST00000479539 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
SP140-210ENST00000479539 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
SP140-210ENST00000479539 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
SP140-210ENST00000479539 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
SP140-210ENST00000479539 METTL22Q9BUU2 404 aaPredicted RBP13.54□□□□□ -0.24
SP140-210ENST00000479539 ANKRD31Q8N7Z5 1873 aa13.54□□□□□ -0.24
SP140-210ENST00000479539 KIF3CO14782 793 aa13.53□□□□□ -0.24
SP140-210ENST00000479539 C1QTNF8P60827 252 aa13.53□□□□□ -0.24
SP140-210ENST00000479539 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
SP140-210ENST00000479539 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
SP140-210ENST00000479539 CCDC191Q8NCU4 936 aa13.53□□□□□ -0.24
SP140-210ENST00000479539 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
SP140-210ENST00000479539 MYD88Q99836 296 aa13.53□□□□□ -0.24
SP140-210ENST00000479539 PI4KAP2A4QPH2 592 aa13.52□□□□□ -0.25
SP140-210ENST00000479539 G2E3Q7L622 706 aa13.52□□□□□ -0.25
SP140-210ENST00000479539 PI4KAP1Q8N8J0 262 aa13.52□□□□□ -0.25
SP140-210ENST00000479539 ZBTB38Q8NAP3 1195 aaPredicted RBP13.52□□□□□ -0.25
SP140-210ENST00000479539 MAP3K2Q9Y2U5 619 aa13.52□□□□□ -0.25
SP140-210ENST00000479539 ARFGEF1Q9Y6D6 1849 aa13.52□□□□□ -0.25
SP140-210ENST00000479539 BBOX1O75936 387 aa13.51□□□□□ -0.25
SP140-210ENST00000479539 FLIIQ13045 1269 aa13.51□□□□□ -0.25
SP140-210ENST00000479539 SF3B3Q15393 1217 aaKnown RBP13.51□□□□□ -0.25
SP140-210ENST00000479539 GRIPAP1Q4V328 841 aa13.51□□□□□ -0.25
SP140-210ENST00000479539 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
SP140-210ENST00000479539 PSMD1Q99460 953 aa13.51□□□□□ -0.25
SP140-210ENST00000479539 DLEC1Q9Y238 1755 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 COL11A2P13942 1736 aaPredicted RBP13.5□□□□□ -0.25
SP140-210ENST00000479539 ABCC4O15439 1325 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 KDM2BQ8NHM5 1336 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 E9PSI1 815 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 IRS4O14654 1257 aaPredicted RBP13.5□□□□□ -0.25
SP140-210ENST00000479539 PPEF1O14829 653 aaPredicted RBP13.5□□□□□ -0.25
SP140-210ENST00000479539 PCCAP05165 728 aaPredicted RBP13.5□□□□□ -0.25
SP140-210ENST00000479539 IGKV5-2P06315 115 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 DIEXFQ68CQ4 756 aaKnown RBP13.5□□□□□ -0.25
SP140-210ENST00000479539 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
SP140-210ENST00000479539 NMRK2Q9NPI5 230 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
SP140-210ENST00000479539 NUP98P52948 1817 aa13.5□□□□□ -0.25
SP140-210ENST00000479539 SNED1Q8TER0 1413 aa13.49□□□□□ -0.25
SP140-210ENST00000479539 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
SP140-210ENST00000479539 GRAPQ13588 217 aa13.49□□□□□ -0.25
SP140-210ENST00000479539 GRAPLQ8TC17 118 aaPredicted RBP13.49□□□□□ -0.25
SP140-210ENST00000479539 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
SP140-210ENST00000479539 ATP6V0A2Q9Y487 856 aa13.49□□□□□ -0.25
SP140-210ENST00000479539 SLX4Q8IY92 1834 aa13.48□□□□□ -0.25
SP140-210ENST00000479539 DSG3P32926 999 aa13.48□□□□□ -0.25
SP140-210ENST00000479539 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms