RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 NIFKQ9BYG3 293 aaKnown RBP10.91□□□□□ -0.66
GAPVD1-217ENST00000479511 GGT7Q9UJ14 662 aa10.91□□□□□ -0.66
GAPVD1-217ENST00000479511 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
GAPVD1-217ENST00000479511 HS2ST1Q7LGA3 356 aa10.9□□□□□ -0.66
GAPVD1-217ENST00000479511 MCF2L2Q86YR7 1114 aa10.9□□□□□ -0.66
GAPVD1-217ENST00000479511 CCDC74AQ96AQ1 378 aa10.9□□□□□ -0.66
GAPVD1-217ENST00000479511 ZSCAN10Q96SZ4 725 aaPredicted RBP10.9□□□□□ -0.66
GAPVD1-217ENST00000479511 TLDC2A0PJX2 215 aa10.89□□□□□ -0.67
GAPVD1-217ENST00000479511 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
GAPVD1-217ENST00000479511 WNT7AO00755 349 aa10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 TNFRSF21O75509 655 aa10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 ITGBL1O95965 494 aaPredicted RBP10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 FGRP09769 529 aa10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 NCLP19338 710 aaKnown RBP10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 NNTQ13423 1086 aa10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 Q6ZVU0 165 aa10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 TTC16Q8NEE8 873 aa10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 USP20Q9Y2K6 914 aa10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 TMA7Q9Y2S6 64 aaKnown RBP10.88□□□□□ -0.67
GAPVD1-217ENST00000479511 TMEM214Q6NUQ4 689 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-217ENST00000479511 ZNF280CQ8ND82 737 aa10.87□□□□□ -0.67
GAPVD1-217ENST00000479511 DMGDHQ9UI17 866 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-217ENST00000479511 RPLP1P05386 114 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 IFFO2Q5TF58 517 aa10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 RHBDD1Q8TEB9 315 aa10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 ITPKCQ96DU7 683 aa10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 ZSWIM4Q9H7M6 989 aa10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 ZNF395Q9H8N7 513 aaPredicted RBP10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 COPRSQ9NQ92 184 aa10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 FAM13BQ9NYF5 915 aa10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 TBX22Q9Y458 520 aa10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 V9GY48 417 aaPredicted RBP10.86□□□□□ -0.67
GAPVD1-217ENST00000479511 TGFBR3LH3BV60 316 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 GIPC1O14908 333 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 USP17L7P0C7H9 530 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 GJA8P48165 433 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 RELBQ01201 579 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 PAK2Q13177 524 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 RHPN1Q8TCX5 695 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 ZFYVE28Q9HCC9 887 aa10.85□□□□□ -0.67
GAPVD1-217ENST00000479511 PLA2G4AP47712 749 aa10.84□□□□□ -0.67
GAPVD1-217ENST00000479511 ERMP1Q7Z2K6 904 aa10.84□□□□□ -0.67
GAPVD1-217ENST00000479511 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
GAPVD1-217ENST00000479511 HSH2DQ96JZ2 352 aa10.84□□□□□ -0.67
GAPVD1-217ENST00000479511 SUSD3Q96L08 255 aa10.84□□□□□ -0.67
GAPVD1-217ENST00000479511 KLF16Q9BXK1 252 aaPredicted RBP10.84□□□□□ -0.67
GAPVD1-217ENST00000479511 ALDH1A1P00352 501 aa10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 ATF4P18848 351 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 TRIP4Q15650 581 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 C4orf17Q53FE4 359 aa10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 XKR5Q6UX68 686 aa10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 NLGN1Q8N2Q7 840 aa10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 GRIP2Q9C0E4 1043 aa10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 ZFAND3Q9H8U3 227 aa10.83□□□□□ -0.68
GAPVD1-217ENST00000479511 STK10O94804 968 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 POLR3DP05423 398 aaPredicted RBP10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 IDH3AP50213 366 aa10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 ST13P50502 369 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 SDE2Q6IQ49 451 aa10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 NXPE4Q6UWF7 544 aa10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 SNX29Q8TEQ0 813 aa10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 OSBPL2Q9H1P3 480 aa10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 FAM8A1Q9UBU6 413 aa10.82□□□□□ -0.68
GAPVD1-217ENST00000479511 SBNO2Q9Y2G9 1366 aa10.81□□□□□ -0.68
GAPVD1-217ENST00000479511 A0A0G2JS52 829 aa10.81□□□□□ -0.68
GAPVD1-217ENST00000479511 NPHS2Q9NP85 383 aa10.81□□□□□ -0.68
GAPVD1-217ENST00000479511 ZIC2O95409 532 aaPredicted RBP10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 IER5Q5VY09 327 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 ZNF438Q7Z4V0 828 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 GPRASP2Q96D09 838 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 BCO2Q9BYV7 579 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 TMEM63CQ9P1W3 806 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 RTCBQ9Y3I0 505 aaKnown RBP10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 KCNMB2Q9Y691 235 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
GAPVD1-217ENST00000479511 PHACTR2O75167 634 aa10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 GTF2E1P29083 439 aaPredicted RBP10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 INPP5BP32019 993 aa10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 BMS1Q14692 1282 aaKnown RBP10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 GNASQ5JWF2 1037 aa10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 EGFLAMQ63HQ2 1017 aa10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 ZNF746Q6NUN9 644 aaPredicted RBP10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 AIDAQ96BJ3 306 aa10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 ELP3Q9H9T3 547 aa10.79□□□□□ -0.68
GAPVD1-217ENST00000479511 UBAP1LF5GYI3 381 aa10.78□□□□□ -0.68
GAPVD1-217ENST00000479511 JAZF1Q86VZ6 243 aa10.78□□□□□ -0.68
GAPVD1-217ENST00000479511 CMTR1Q8N1G2 835 aaKnown RBP10.78□□□□□ -0.68
GAPVD1-217ENST00000479511 KBTBD4Q9NVX7 518 aa10.78□□□□□ -0.68
GAPVD1-217ENST00000479511 WASF2Q9Y6W5 498 aa10.78□□□□□ -0.68
GAPVD1-217ENST00000479511 RGS20O76081 388 aa10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 GRNP28799 593 aaKnown RBP10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 PHKA2P46019 1235 aa10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 ARSDP51689 593 aa10.77□□□□□ -0.69
GAPVD1-217ENST00000479511 HIF1AQ16665 826 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms