RNA–Protein interactions for RNA: ENST00000479480.5

CTPS1-208, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 777 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-208ENST00000479480 NIP7Q9Y221 180 aaKnown RBP eCLIP11.3□□□□□ -0.6
CTPS1-208ENST00000479480 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
CTPS1-208ENST00000479480 SLX4Q8IY92 1834 aa11.3□□□□□ -0.6
CTPS1-208ENST00000479480 U2AF1L5P0DN76 240 aaPredicted RBP11.29□□□□□ -0.6
CTPS1-208ENST00000479480 VEGFBP49765 207 aa11.29□□□□□ -0.6
CTPS1-208ENST00000479480 U2AF1Q01081 240 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTPS1-208ENST00000479480 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
CTPS1-208ENST00000479480 SOGA3Q5TF21 947 aa11.29□□□□□ -0.6
CTPS1-208ENST00000479480 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
CTPS1-208ENST00000479480 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
CTPS1-208ENST00000479480 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
CTPS1-208ENST00000479480 CCDC88AQ3V6T2 1871 aa11.29□□□□□ -0.6
CTPS1-208ENST00000479480 IQCA1LA6NCM1 817 aa11.28□□□□□ -0.6
CTPS1-208ENST00000479480 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
CTPS1-208ENST00000479480 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
CTPS1-208ENST00000479480 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
CTPS1-208ENST00000479480 RTF1Q92541 710 aaKnown RBP11.28□□□□□ -0.6
CTPS1-208ENST00000479480 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
CTPS1-208ENST00000479480 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
CTPS1-208ENST00000479480 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.6
CTPS1-208ENST00000479480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
CTPS1-208ENST00000479480 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.61
CTPS1-208ENST00000479480 FZD9O00144 591 aa11.27□□□□□ -0.61
CTPS1-208ENST00000479480 FMR1Q06787 632 aaKnown RBP eCLIP11.27□□□□□ -0.61
CTPS1-208ENST00000479480 TAF7Q15545 349 aaPredicted RBP11.27□□□□□ -0.61
CTPS1-208ENST00000479480 MAP1SQ66K74 1059 aaPredicted RBP11.27□□□□□ -0.61
CTPS1-208ENST00000479480 ZFP91Q96JP5 570 aaPredicted RBP11.27□□□□□ -0.61
CTPS1-208ENST00000479480 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
CTPS1-208ENST00000479480 HACL1Q9UJ83 578 aa11.27□□□□□ -0.61
CTPS1-208ENST00000479480 NUDCQ9Y266 331 aa11.27□□□□□ -0.61
CTPS1-208ENST00000479480 ZNF652Q9Y2D9 606 aa11.27□□□□□ -0.61
CTPS1-208ENST00000479480 TIAM2Q8IVF5 1701 aa11.26□□□□□ -0.61
CTPS1-208ENST00000479480 ALDH1B1P30837 517 aa11.26□□□□□ -0.61
CTPS1-208ENST00000479480 EPHX2P34913 555 aa11.26□□□□□ -0.61
CTPS1-208ENST00000479480 IARSP41252 1262 aaKnown RBP11.26□□□□□ -0.61
CTPS1-208ENST00000479480 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
CTPS1-208ENST00000479480 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
CTPS1-208ENST00000479480 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
CTPS1-208ENST00000479480 CNTROBQ8N137 903 aa11.26□□□□□ -0.61
CTPS1-208ENST00000479480 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
CTPS1-208ENST00000479480 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
CTPS1-208ENST00000479480 HTATSF1O43719 755 aaKnown RBP11.25□□□□□ -0.61
CTPS1-208ENST00000479480 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
CTPS1-208ENST00000479480 PRDM10Q9NQV6 1147 aa11.25□□□□□ -0.61
CTPS1-208ENST00000479480 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
CTPS1-208ENST00000479480 RRP7AQ9Y3A4 280 aaKnown RBP11.25□□□□□ -0.61
CTPS1-208ENST00000479480 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
CTPS1-208ENST00000479480 SIPA1L3O60292 1781 aaPredicted RBP11.25□□□□□ -0.61
CTPS1-208ENST00000479480 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
CTPS1-208ENST00000479480 CRY2Q49AN0 593 aa11.24□□□□□ -0.61
CTPS1-208ENST00000479480 SUSD4Q5VX71 490 aa11.24□□□□□ -0.61
CTPS1-208ENST00000479480 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
CTPS1-208ENST00000479480 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
CTPS1-208ENST00000479480 GPTP24298 496 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 EPS15P42566 896 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 CTCFP49711 727 aaPredicted RBP11.23□□□□□ -0.61
CTPS1-208ENST00000479480 LBX1P52954 281 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
CTPS1-208ENST00000479480 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 GPC2Q8N158 579 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 PSMD1Q99460 953 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 THUMPD2Q9BTF0 503 aaKnown RBP11.23□□□□□ -0.61
CTPS1-208ENST00000479480 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 GJA3Q9Y6H8 435 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 ABCC12Q96J65 1359 aa11.23□□□□□ -0.61
CTPS1-208ENST00000479480 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
CTPS1-208ENST00000479480 RASSF10A6NK89 507 aa11.22□□□□□ -0.61
CTPS1-208ENST00000479480 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
CTPS1-208ENST00000479480 STK25O00506 426 aa11.22□□□□□ -0.61
CTPS1-208ENST00000479480 MYL6BP14649 208 aa11.22□□□□□ -0.61
CTPS1-208ENST00000479480 UBN2Q6ZU65 1347 aa11.22□□□□□ -0.61
CTPS1-208ENST00000479480 PNMA8AQ86V59 439 aaPredicted RBP11.22□□□□□ -0.61
CTPS1-208ENST00000479480 SNED1Q8TER0 1413 aa11.22□□□□□ -0.61
CTPS1-208ENST00000479480 MAP3K15Q6ZN16 1313 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.61
CTPS1-208ENST00000479480 HSPA8P11142 646 aaKnown RBP11.21□□□□□ -0.61
CTPS1-208ENST00000479480 HOXA10P31260 410 aaPredicted RBP11.21□□□□□ -0.61
CTPS1-208ENST00000479480 SCNN1DP51172 638 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
CTPS1-208ENST00000479480 ZNF34Q8IZ26 560 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 JDP2Q8WYK2 163 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 AIDAQ96BJ3 306 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.61
CTPS1-208ENST00000479480 PCDHB8Q9UN66 801 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
CTPS1-208ENST00000479480 COL4A5P29400 1685 aa11.2□□□□□ -0.62
CTPS1-208ENST00000479480 TRAF5O00463 557 aa11.2□□□□□ -0.62
CTPS1-208ENST00000479480 EIF6P56537 245 aaKnown RBP11.2□□□□□ -0.62
CTPS1-208ENST00000479480 CST9Q5W186 159 aa11.2□□□□□ -0.62
CTPS1-208ENST00000479480 ZNF579Q8NAF0 562 aaKnown RBP11.2□□□□□ -0.62
CTPS1-208ENST00000479480 KIF12Q96FN5 646 aa11.2□□□□□ -0.62
CTPS1-208ENST00000479480 NYXQ9GZU5 481 aa11.2□□□□□ -0.62
CTPS1-208ENST00000479480 BCORQ6W2J9 1755 aa11.19□□□□□ -0.62
CTPS1-208ENST00000479480 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
CTPS1-208ENST00000479480 NTSR2O95665 410 aa11.19□□□□□ -0.62
CTPS1-208ENST00000479480 CC2D2BQ6DHV5 1058 aa11.19□□□□□ -0.62
CTPS1-208ENST00000479480 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms