RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TRAF5O00463 557 aa8.88□□□□□ -0.99
VCP-205ENST00000479300 U2SURPO15042 1029 aaKnown RBP8.88□□□□□ -0.99
VCP-205ENST00000479300 NPHP1O15259 732 aa8.88□□□□□ -0.99
VCP-205ENST00000479300 EPS15P42566 896 aa8.88□□□□□ -0.99
VCP-205ENST00000479300 SCNN1DP51172 638 aa8.88□□□□□ -0.99
VCP-205ENST00000479300 CST9Q5W186 159 aa8.88□□□□□ -0.99
VCP-205ENST00000479300 DIEXFQ68CQ4 756 aaKnown RBP8.88□□□□□ -0.99
VCP-205ENST00000479300 GPC2Q8N158 579 aa8.88□□□□□ -0.99
VCP-205ENST00000479300 GAS2L2Q8NHY3 880 aa8.88□□□□□ -0.99
VCP-205ENST00000479300 NIP7Q9Y221 180 aaKnown RBP eCLIP8.88□□□□□ -0.99
VCP-205ENST00000479300 RGS19P49795 217 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 CRY2Q49AN0 593 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 CYP4F22Q6NT55 531 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 PNMA8AQ86V59 439 aaPredicted RBP8.87□□□□□ -0.99
VCP-205ENST00000479300 RTKN2Q8IZC4 609 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 CAPNS2Q96L46 248 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 PSMD1Q99460 953 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 RSPH6AQ9H0K4 717 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 TSKSQ9UJT2 592 aa8.87□□□□□ -0.99
VCP-205ENST00000479300 ABT1Q9ULW3 272 aaKnown RBP8.87□□□□□ -0.99
VCP-205ENST00000479300 AOC2O75106 756 aa8.86□□□□□ -0.99
VCP-205ENST00000479300 PRKAR2BP31323 418 aa8.86□□□□□ -0.99
VCP-205ENST00000479300 MAP2K1Q02750 393 aaPredicted RBP8.86□□□□□ -0.99
VCP-205ENST00000479300 DCTN1Q14203 1278 aa8.86□□□□□ -0.99
VCP-205ENST00000479300 TPTE2Q6XPS3 522 aa8.86□□□□□ -0.99
VCP-205ENST00000479300 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
VCP-205ENST00000479300 MCM10Q7L590 875 aa8.86□□□□□ -0.99
VCP-205ENST00000479300 NUTM1Q86Y26 1132 aa8.86□□□□□ -0.99
VCP-205ENST00000479300 TRPM7Q96QT4 1865 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 UBN2Q6ZU65 1347 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 RGL2O15211 777 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 SNRPA1P09661 255 aaKnown RBP8.85□□□□□ -0.99
VCP-205ENST00000479300 NUDCQ9Y266 331 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 ZNF652Q9Y2D9 606 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 GJA3Q9Y6H8 435 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 LAMB4A4D0S4 1761 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 RIC1Q4ADV7 1423 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 NPC1L1Q9UHC9 1359 aa8.85□□□□□ -0.99
VCP-205ENST00000479300 NUP98P52948 1817 aa8.84□□□□□ -0.99
VCP-205ENST00000479300 CCDC85CA6NKD9 419 aa8.84□□□□□ -0.99
VCP-205ENST00000479300 ABCB7O75027 752 aa8.84□□□□□ -0.99
VCP-205ENST00000479300 ALDH1B1P30837 517 aa8.84□□□□□ -0.99
VCP-205ENST00000479300 HOXA10P31260 410 aaPredicted RBP8.84□□□□□ -0.99
VCP-205ENST00000479300 GRM1Q13255 1194 aa8.84□□□□□ -0.99
VCP-205ENST00000479300 GPR101Q96P66 508 aaPredicted RBP8.84□□□□□ -0.99
VCP-205ENST00000479300 MIS18AQ9NYP9 233 aa8.84□□□□□ -0.99
VCP-205ENST00000479300 TLL2Q9Y6L7 1015 aa8.84□□□□□ -0.99
VCP-205ENST00000479300 NEFMP07197 916 aa8.83□□□□□ -1
VCP-205ENST00000479300 MLLT1Q03111 559 aaPredicted RBP8.83□□□□□ -1
VCP-205ENST00000479300 TTLL7Q6ZT98 887 aa8.83□□□□□ -1
VCP-205ENST00000479300 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
VCP-205ENST00000479300 POTEDQ86YR6 584 aa8.83□□□□□ -1
VCP-205ENST00000479300 JDP2Q8WYK2 163 aa8.83□□□□□ -1
VCP-205ENST00000479300 ZIC5Q96T25 663 aa8.83□□□□□ -1
VCP-205ENST00000479300 KDM3BQ7LBC6 1761 aa8.83□□□□□ -1
VCP-205ENST00000479300 CASP8AP2Q9UKL3 1982 aa8.82□□□□□ -1
VCP-205ENST00000479300 TCERG1O14776 1098 aaKnown RBP8.82□□□□□ -1
VCP-205ENST00000479300 HIRAP54198 1017 aaPredicted RBP8.82□□□□□ -1
VCP-205ENST00000479300 EIF6P56537 245 aaKnown RBP8.82□□□□□ -1
VCP-205ENST00000479300 SUSD4Q5VX71 490 aa8.82□□□□□ -1
VCP-205ENST00000479300 DLK2Q6UY11 383 aa8.82□□□□□ -1
VCP-205ENST00000479300 PAXIP1Q6ZW49 1069 aaPredicted RBP8.82□□□□□ -1
VCP-205ENST00000479300 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
VCP-205ENST00000479300 SAPCD2Q86UD0 394 aa8.82□□□□□ -1
VCP-205ENST00000479300 LARGE2Q8N3Y3 721 aa8.82□□□□□ -1
VCP-205ENST00000479300 ANP32EQ9BTT0 268 aa8.82□□□□□ -1
VCP-205ENST00000479300 MCOLN1Q9GZU1 580 aa8.82□□□□□ -1
VCP-205ENST00000479300 GPRC5DQ9NZD1 345 aa8.82□□□□□ -1
VCP-205ENST00000479300 SHTN1A0MZ66 631 aa8.81□□□□□ -1
VCP-205ENST00000479300 NTSR2O95665 410 aa8.81□□□□□ -1
VCP-205ENST00000479300 GPTP24298 496 aa8.81□□□□□ -1
VCP-205ENST00000479300 LMOD1P29536 600 aaPredicted RBP8.81□□□□□ -1
VCP-205ENST00000479300 ECE1P42892 770 aa8.81□□□□□ -1
VCP-205ENST00000479300 CXCL9Q07325 125 aa8.81□□□□□ -1
VCP-205ENST00000479300 AOC3Q16853 763 aa8.81□□□□□ -1
VCP-205ENST00000479300 CC2D2BQ6DHV5 1058 aa8.81□□□□□ -1
VCP-205ENST00000479300 NGEFQ8N5V2 710 aa8.81□□□□□ -1
VCP-205ENST00000479300 GLIS2Q9BZE0 524 aaPredicted RBP8.81□□□□□ -1
VCP-205ENST00000479300 IBTKQ9P2D0 1353 aaPredicted RBP8.81□□□□□ -1
VCP-205ENST00000479300 MAP3K15Q6ZN16 1313 aa8.8□□□□□ -1
VCP-205ENST00000479300 ERVV-1B6SEH8 477 aa8.8□□□□□ -1
VCP-205ENST00000479300 PPEF1O14829 653 aaPredicted RBP8.8□□□□□ -1
VCP-205ENST00000479300 CELF2O95319 508 aaKnown RBP8.8□□□□□ -1
VCP-205ENST00000479300 GTF2E1P29083 439 aaPredicted RBP8.8□□□□□ -1
VCP-205ENST00000479300 MAP2K2P36507 400 aa8.8□□□□□ -1
VCP-205ENST00000479300 GMPSP49915 693 aaPredicted RBP8.8□□□□□ -1
VCP-205ENST00000479300 LRP10Q7Z4F1 713 aa8.8□□□□□ -1
VCP-205ENST00000479300 ZNF34Q8IZ26 560 aa8.8□□□□□ -1
VCP-205ENST00000479300 TRPM4Q8TD43 1214 aa8.8□□□□□ -1
VCP-205ENST00000479300 RTF1Q92541 710 aaKnown RBP8.8□□□□□ -1
VCP-205ENST00000479300 CRAMP1Q96RY5 1269 aa8.8□□□□□ -1
VCP-205ENST00000479300 ZBTB3Q9H5J0 574 aa8.8□□□□□ -1
VCP-205ENST00000479300 PGAP2Q9UHJ9 254 aa8.8□□□□□ -1
VCP-205ENST00000479300 DUOX1Q9NRD9 1551 aa8.8□□□□□ -1
VCP-205ENST00000479300 LAMB2P55268 1798 aa8.8□□□□□ -1
VCP-205ENST00000479300 DLG5Q8TDM6 1919 aa8.8□□□□□ -1
VCP-205ENST00000479300 COL4A1P02462 1669 aa8.79□□□□□ -1
VCP-205ENST00000479300 PDE4DIPQ5VU43 2346 aa8.79□□□□□ -1
VCP-205ENST00000479300 PPIP5K2O43314 1243 aa8.79□□□□□ -1
VCP-205ENST00000479300 U2AF1L5P0DN76 240 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms