RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 HOXA10P31260 410 aaPredicted RBP9.9□□□□□ -0.82
RN7SL549P-201ENST00000478997 TCIRG1Q13488 830 aa9.9□□□□□ -0.82
RN7SL549P-201ENST00000478997 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
RN7SL549P-201ENST00000478997 SLC10A5Q5PT55 438 aa9.9□□□□□ -0.82
RN7SL549P-201ENST00000478997 NUTM1Q86Y26 1132 aa9.9□□□□□ -0.82
RN7SL549P-201ENST00000478997 PLBD2Q8NHP8 589 aa9.9□□□□□ -0.82
RN7SL549P-201ENST00000478997 AIMP1Q12904 312 aaKnown RBP9.89□□□□□ -0.83
RN7SL549P-201ENST00000478997 CCDC93Q567U6 631 aa9.89□□□□□ -0.83
RN7SL549P-201ENST00000478997 NLRP10Q86W26 655 aa9.89□□□□□ -0.83
RN7SL549P-201ENST00000478997 UTP14AQ9BVJ6 771 aaKnown RBP9.89□□□□□ -0.83
RN7SL549P-201ENST00000478997 TAOK3Q9H2K8 898 aa9.89□□□□□ -0.83
RN7SL549P-201ENST00000478997 LAMB2P55268 1798 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 TRIM28Q13263 835 aaKnown RBP9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 CC2D2BQ6DHV5 1058 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 ANKRD13DQ6ZTN6 518 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 WDR63Q8IWG1 891 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 C8orf58Q8NAV2 365 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 ZNF526Q8TF50 670 aaPredicted RBP9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 CRAMP1Q96RY5 1269 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 ISCA1Q9BUE6 129 aa9.88□□□□□ -0.83
RN7SL549P-201ENST00000478997 SH3TC1Q8TE82 1336 aa9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 GRIPAP1Q4V328 841 aa9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 CCDC30Q5VVM6 783 aa9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 RTKN2Q8IZC4 609 aa9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 RPGRQ92834 1020 aaKnown RBP9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 TSR2Q969E8 191 aaKnown RBP9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 NLRP3Q96P20 1036 aa9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 DDX60Q8IY21 1712 aaKnown RBP9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 WDR90Q96KV7 1748 aa9.87□□□□□ -0.83
RN7SL549P-201ENST00000478997 CACNA1FO60840 1977 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 GLTPD2A6NH11 291 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 ELL2O00472 640 aaPredicted RBP9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 TOMM70O94826 608 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 FKBP4Q02790 459 aaKnown RBP eCLIP9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 C3orf67Q6ZVT6 689 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 TSPYL6Q8N831 410 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 RBM17Q96I25 401 aaKnown RBP9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 PSMD1Q99460 953 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 NMRK2Q9NPI5 230 aa9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 ZNF219Q9P2Y4 722 aaPredicted RBP9.86□□□□□ -0.83
RN7SL549P-201ENST00000478997 FANCIQ9NVI1 1328 aa9.85□□□□□ -0.83
RN7SL549P-201ENST00000478997 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
RN7SL549P-201ENST00000478997 PHAXQ9H814 394 aaKnown RBP9.85□□□□□ -0.83
RN7SL549P-201ENST00000478997 TRMT112Q9UI30 125 aaKnown RBP9.85□□□□□ -0.83
RN7SL549P-201ENST00000478997 LRRC37AA6NMS7 1700 aa9.85□□□□□ -0.83
RN7SL549P-201ENST00000478997 ABCC4O15439 1325 aa9.84□□□□□ -0.83
RN7SL549P-201ENST00000478997 ZNF521Q96K83 1311 aa9.84□□□□□ -0.83
RN7SL549P-201ENST00000478997 PPEF1O14829 653 aaPredicted RBP9.84□□□□□ -0.83
RN7SL549P-201ENST00000478997 DDX58O95786 925 aaKnown RBP9.84□□□□□ -0.83
RN7SL549P-201ENST00000478997 RIC3Q7Z5B4 369 aa9.84□□□□□ -0.83
RN7SL549P-201ENST00000478997 RBM46Q8TBY0 533 aaKnown RBP9.84□□□□□ -0.83
RN7SL549P-201ENST00000478997 SENP3-EIF4A1A0A087X0R7 540 aa9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 HCLS1P14317 486 aaPredicted RBP9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 SF3B3Q15393 1217 aaKnown RBP9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 DPY19L2Q6NUT2 758 aa9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 OLFM4Q6UX06 510 aa9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 FAM9BQ8IZU0 186 aa9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 CCDC191Q8NCU4 936 aa9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 METTL22Q9BUU2 404 aaPredicted RBP9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 STK31Q9BXU1 1019 aa9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 ATP6V0A2Q9Y487 856 aa9.83□□□□□ -0.84
RN7SL549P-201ENST00000478997 ATP5J2-PTCD1G3V325 749 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 BBOX1O75936 387 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 HSP90B1P14625 803 aaKnown RBP9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 VEGFAP15692 232 aaPredicted RBP9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 HSPA6P17066 643 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 IARSP41252 1262 aaKnown RBP9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 GRAPQ13588 217 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 KSR2Q6VAB6 950 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 TMC4Q7Z404 712 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 SYNE4Q8N205 404 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 ZBTB38Q8NAP3 1195 aaPredicted RBP9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 GRAPLQ8TC17 118 aaPredicted RBP9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 VPS33BQ9H267 617 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 MYH16Q9H6N6 1097 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 RRAGCQ9HB90 399 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 ZNF277Q9NRM2 450 aaPredicted RBP9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 SCN4AP35499 1836 aa9.82□□□□□ -0.84
RN7SL549P-201ENST00000478997 POTECB2RU33 542 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 CCER2I3L3R5 266 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 FZD9O00144 591 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 VAMP4O75379 141 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 PCCAP05165 728 aaPredicted RBP9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 FSTL1Q12841 308 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 DDX46Q7L014 1031 aaKnown RBP9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 SP8Q8IXZ3 490 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 C16orf71Q8IYS4 520 aaPredicted RBP9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 FAM89AQ96GI7 184 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 L3MBTL3Q96JM7 780 aaPredicted RBP9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 MYD88Q99836 296 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 RTFDC1Q9BY42 306 aaPredicted RBP9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 SPINK5Q9NQ38 1064 aaPredicted RBP9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 CWC25Q9NXE8 425 aaPredicted RBP9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 CDHR2Q9BYE9 1310 aa9.81□□□□□ -0.84
RN7SL549P-201ENST00000478997 COL4A5P29400 1685 aa9.8□□□□□ -0.84
RN7SL549P-201ENST00000478997 DUOX1Q9NRD9 1551 aa9.8□□□□□ -0.84
RN7SL549P-201ENST00000478997 LTBP1Q14766 1721 aa9.8□□□□□ -0.84
RN7SL549P-201ENST00000478997 PI4KAP2A4QPH2 592 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms