RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887		A0A0G2JLW4	131 aa		12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	CHRNA5	P30532	468 aa		12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	FKBP5	Q13451	457 aa	Predicted RBP	12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	NUTM1	Q86Y26	1132 aa		12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	SSH1	Q8WYL5	1049 aa		12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	MYD88	Q99836	296 aa		12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	UTP14A	Q9BVJ6	771 aa	Known RBP	12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	BRCA1	P38398	1863 aa	Known RBP	12.12	□□□□□ -0.47
SFI1-222	ENST00000478887	CACNA1F	O60840	1977 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	ATP5J2-PTCD1	G3V325	749 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	GTF2E1	P29083	439 aa	Predicted RBP	12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	BRPF1	P55201	1214 aa	Predicted RBP	12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	ERFE	Q4G0M1	354 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	C2CD5	Q86YS7	1000 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	CCDC191	Q8NCU4	936 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	DNAAF4	Q8WXU2	420 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	PTPRC	P08575	1304 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887	SH3TC1	Q8TE82	1336 aa		12.11	□□□□□ -0.47
SFI1-222	ENST00000478887		H0YIN7	160 aa		12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	IGKV5-2	P06315	115 aa		12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	YBX3	P16989	372 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	RARS	P54136	660 aa	Known RBP	12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	NEXN	Q0ZGT2	675 aa		12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	CRY2	Q49AN0	593 aa		12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	SLC10A5	Q5PT55	438 aa		12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	SMC4	Q9NTJ3	1288 aa		12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	PIM2	Q9P1W9	311 aa		12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	TRMT112	Q9UI30	125 aa	Known RBP	12.1	□□□□□ -0.47
SFI1-222	ENST00000478887	SRGN	P10124	158 aa		12.09	□□□□□ -0.47
SFI1-222	ENST00000478887	GPR162	Q16538	588 aa		12.09	□□□□□ -0.47
SFI1-222	ENST00000478887	STYK1	Q6J9G0	422 aa		12.09	□□□□□ -0.47
SFI1-222	ENST00000478887	BCL2L13	Q9BXK5	485 aa		12.09	□□□□□ -0.47
SFI1-222	ENST00000478887	CWC25	Q9NXE8	425 aa	Predicted RBP	12.09	□□□□□ -0.47
SFI1-222	ENST00000478887	LAMB2	P55268	1798 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	DCAF8L1	A6NGE4	600 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	NEURL1B	A8MQ27	555 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887		F6X3S4	739 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	PCCA	P05165	728 aa	Predicted RBP	12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	CWF19L2	Q2TBE0	894 aa	Known RBP	12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	SYNE4	Q8N205	404 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	LINS1	Q8NG48	757 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	MASTL	Q96GX5	879 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	KIF16B	Q96L93	1317 aa		12.08	□□□□□ -0.48
SFI1-222	ENST00000478887	NPR1	P16066	1061 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	DALRD3	Q5D0E6	543 aa	Known RBP	12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	BEND3	Q5T5X7	828 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	C3orf67	Q6ZVT6	689 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	DDX60	Q8IY21	1712 aa	Known RBP	12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	PELP1	Q8IZL8	1130 aa	Known RBP	12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	TTLL6	Q8N841	843 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	FAM89A	Q96GI7	184 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	WWC3	Q9ULE0	1092 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	BCS1L	Q9Y276	419 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	CDHR2	Q9BYE9	1310 aa		12.07	□□□□□ -0.48
SFI1-222	ENST00000478887	GRIN3B	O60391	1043 aa		12.06	□□□□□ -0.48
SFI1-222	ENST00000478887	HCLS1	P14317	486 aa	Predicted RBP	12.06	□□□□□ -0.48
SFI1-222	ENST00000478887	HOXA10	P31260	410 aa	Predicted RBP	12.06	□□□□□ -0.48
SFI1-222	ENST00000478887	GCKR	Q14397	625 aa		12.06	□□□□□ -0.48
SFI1-222	ENST00000478887	CNKSR1	Q969H4	720 aa		12.06	□□□□□ -0.48
SFI1-222	ENST00000478887	NLRP3	Q96P20	1036 aa		12.06	□□□□□ -0.48
SFI1-222	ENST00000478887	ARFGEF1	Q9Y6D6	1849 aa		12.06	□□□□□ -0.48
SFI1-222	ENST00000478887	IRS4	O14654	1257 aa	Predicted RBP	12.05	□□□□□ -0.48
SFI1-222	ENST00000478887	HSP90B1	P14625	803 aa	Known RBP	12.05	□□□□□ -0.48
SFI1-222	ENST00000478887	PRPF40B	Q6NWY9	871 aa	Known RBP	12.05	□□□□□ -0.48
SFI1-222	ENST00000478887	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
SFI1-222	ENST00000478887		H7C1W4	665 aa		12.04	□□□□□ -0.48
SFI1-222	ENST00000478887	ALDH1L1	O75891	902 aa		12.04	□□□□□ -0.48
SFI1-222	ENST00000478887	CASP7	P55210	303 aa		12.04	□□□□□ -0.48
SFI1-222	ENST00000478887	SF3B3	Q15393	1217 aa	Known RBP	12.04	□□□□□ -0.48
SFI1-222	ENST00000478887	ARHGAP45	Q92619	1136 aa		12.04	□□□□□ -0.48
SFI1-222	ENST00000478887	RPGR	Q92834	1020 aa	Known RBP	12.04	□□□□□ -0.48
SFI1-222	ENST00000478887	CRAMP1	Q96RY5	1269 aa		12.04	□□□□□ -0.48
SFI1-222	ENST00000478887	PDE8A	O60658	829 aa		12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	BCAR3	O75815	825 aa		12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	ALDH1B1	P30837	517 aa		12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	RTL5	Q5HYW3	569 aa	Predicted RBP	12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	SLC4A10	Q6U841	1118 aa		12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	UBE3B	Q7Z3V4	1068 aa		12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	RBM17	Q96I25	401 aa	Known RBP	12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	API5	Q9BZZ5	524 aa	Known RBP	12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	SRCIN1	Q9C0H9	1055 aa		12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	NOB1	Q9ULX3	412 aa	Known RBP	12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	SNED1	Q8TER0	1413 aa		12.03	□□□□□ -0.48
SFI1-222	ENST00000478887	C7orf43	Q8WVR3	580 aa		12.02	□□□□□ -0.49
SFI1-222	ENST00000478887	JARID2	Q92833	1246 aa	Predicted RBP	12.02	□□□□□ -0.49
SFI1-222	ENST00000478887	PLA2G12B	Q9BX93	195 aa		12.02	□□□□□ -0.49
SFI1-222	ENST00000478887	ABCC4	O15439	1325 aa		12.02	□□□□□ -0.49
SFI1-222	ENST00000478887	GRM8	O00222	908 aa		12.01	□□□□□ -0.49
SFI1-222	ENST00000478887	C21orf2	O43822	256 aa		12.01	□□□□□ -0.49
SFI1-222	ENST00000478887	CTSW	P56202	376 aa		12.01	□□□□□ -0.49
SFI1-222	ENST00000478887	SOGA3	Q5TF21	947 aa		12.01	□□□□□ -0.49
SFI1-222	ENST00000478887	SLX4	Q8IY92	1834 aa		12.01	□□□□□ -0.49
SFI1-222	ENST00000478887	UTY	O14607	1347 aa		12.01	□□□□□ -0.49
SFI1-222	ENST00000478887	RTL9	Q8NET4	1388 aa		12.01	□□□□□ -0.49
SFI1-222	ENST00000478887	COL4A1	P02462	1669 aa		12	□□□□□ -0.49
SFI1-222	ENST00000478887	IPO8	O15397	1037 aa	Known RBP	12	□□□□□ -0.49
SFI1-222	ENST00000478887	TRIM27	P14373	513 aa		12	□□□□□ -0.49
SFI1-222	ENST00000478887	CCT4	P50991	539 aa	Known RBP	12	□□□□□ -0.49
SFI1-222	ENST00000478887	GRAP	Q13588	217 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms