RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.29
HDAC8-217ENST00000478743 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
HDAC8-217ENST00000478743 DZIP3Q86Y13 1208 aaKnown RBP16.88■□□□□ 0.29
HDAC8-217ENST00000478743 PGAP2Q9UHJ9 254 aa16.88■□□□□ 0.29
HDAC8-217ENST00000478743 HTTP42858 3142 aa16.87■□□□□ 0.29
HDAC8-217ENST00000478743 GMPSP49915 693 aaPredicted RBP16.87■□□□□ 0.29
HDAC8-217ENST00000478743 RGMBQ6NW40 437 aa16.87■□□□□ 0.29
HDAC8-217ENST00000478743 POLR2AP24928 1970 aaKnown RBP16.87■□□□□ 0.29
HDAC8-217ENST00000478743 NPC1L1Q9UHC9 1359 aa16.87■□□□□ 0.29
HDAC8-217ENST00000478743 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
HDAC8-217ENST00000478743 USP48Q86UV5 1035 aa16.86■□□□□ 0.29
HDAC8-217ENST00000478743 DLL1O00548 723 aa16.85■□□□□ 0.29
HDAC8-217ENST00000478743 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
HDAC8-217ENST00000478743 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
HDAC8-217ENST00000478743 BRCA2P51587 3418 aa16.84■□□□□ 0.29
HDAC8-217ENST00000478743 IL13P35225 146 aa16.84■□□□□ 0.29
HDAC8-217ENST00000478743 CXCL9Q07325 125 aa16.84■□□□□ 0.29
HDAC8-217ENST00000478743 AOC3Q16853 763 aa16.84■□□□□ 0.29
HDAC8-217ENST00000478743 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
HDAC8-217ENST00000478743 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
HDAC8-217ENST00000478743 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
HDAC8-217ENST00000478743 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
HDAC8-217ENST00000478743 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
HDAC8-217ENST00000478743 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
HDAC8-217ENST00000478743 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
HDAC8-217ENST00000478743 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
HDAC8-217ENST00000478743 KCNQ3O43525 872 aa16.82■□□□□ 0.28
HDAC8-217ENST00000478743 SLC10A3P09131 477 aa16.82■□□□□ 0.28
HDAC8-217ENST00000478743 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
HDAC8-217ENST00000478743 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
HDAC8-217ENST00000478743 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
HDAC8-217ENST00000478743 ADM5C9JUS6 153 aa16.81■□□□□ 0.28
HDAC8-217ENST00000478743 ZNF157P51786 506 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-217ENST00000478743 CRY2Q49AN0 593 aa16.81■□□□□ 0.28
HDAC8-217ENST00000478743 ZNF296Q8WUU4 475 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-217ENST00000478743 GBA2Q9HCG7 927 aaPredicted RBP16.81■□□□□ 0.28
HDAC8-217ENST00000478743 NIP7Q9Y221 180 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC8-217ENST00000478743 EGFRP00533 1210 aa16.8■□□□□ 0.28
HDAC8-217ENST00000478743 HMOX1P09601 288 aa16.8■□□□□ 0.28
HDAC8-217ENST00000478743 ZNF790Q6PG37 636 aa16.8■□□□□ 0.28
HDAC8-217ENST00000478743 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
HDAC8-217ENST00000478743 CENPFP49454 3210 aa16.79■□□□□ 0.28
HDAC8-217ENST00000478743 COLQQ9Y215 455 aaPredicted RBP16.79■□□□□ 0.28
HDAC8-217ENST00000478743 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
HDAC8-217ENST00000478743 HLFQ16534 295 aa16.78■□□□□ 0.28
HDAC8-217ENST00000478743 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
HDAC8-217ENST00000478743 TPTE2Q6XPS3 522 aa16.78■□□□□ 0.28
HDAC8-217ENST00000478743 ZC3H15Q8WU90 426 aaKnown RBP16.78■□□□□ 0.28
HDAC8-217ENST00000478743 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
HDAC8-217ENST00000478743 RAD17O75943 681 aa16.77■□□□□ 0.28
HDAC8-217ENST00000478743 CLEC4GQ6UXB4 293 aa16.77■□□□□ 0.28
HDAC8-217ENST00000478743 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.28
HDAC8-217ENST00000478743 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.28
HDAC8-217ENST00000478743 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
HDAC8-217ENST00000478743 NUP98P52948 1817 aa16.76■□□□□ 0.27
HDAC8-217ENST00000478743 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
HDAC8-217ENST00000478743 PKN2Q16513 984 aaKnown RBP16.76■□□□□ 0.27
HDAC8-217ENST00000478743 CC2D2BQ6DHV5 1058 aa16.76■□□□□ 0.27
HDAC8-217ENST00000478743 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
HDAC8-217ENST00000478743 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
HDAC8-217ENST00000478743 ZNRF3Q9ULT6 936 aa16.76■□□□□ 0.27
HDAC8-217ENST00000478743 DUOX1Q9NRD9 1551 aa16.76■□□□□ 0.27
HDAC8-217ENST00000478743 FBXO46Q6PJ61 603 aaPredicted RBP16.75■□□□□ 0.27
HDAC8-217ENST00000478743 SAMD7Q7Z3H4 446 aa16.75■□□□□ 0.27
HDAC8-217ENST00000478743 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
HDAC8-217ENST00000478743 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
HDAC8-217ENST00000478743 CDHR2Q9BYE9 1310 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 YDJCA8MPS7 323 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
HDAC8-217ENST00000478743 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
HDAC8-217ENST00000478743 KRT26Q7Z3Y9 468 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 NPM2Q86SE8 214 aaKnown RBP16.74■□□□□ 0.27
HDAC8-217ENST00000478743 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 C2orf69Q8N8R5 385 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 CNOT7Q9UIV1 285 aaKnown RBP16.74■□□□□ 0.27
HDAC8-217ENST00000478743 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
HDAC8-217ENST00000478743 COL6A3P12111 3177 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 LAMB2P55268 1798 aa16.74■□□□□ 0.27
HDAC8-217ENST00000478743 ASTN2O75129 1339 aaPredicted RBP16.73■□□□□ 0.27
HDAC8-217ENST00000478743 FMNL2Q96PY5 1086 aa16.73■□□□□ 0.27
HDAC8-217ENST00000478743 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
HDAC8-217ENST00000478743 RPGRQ92834 1020 aaKnown RBP16.72■□□□□ 0.27
HDAC8-217ENST00000478743 R3HDMLQ9H3Y0 253 aa16.72■□□□□ 0.27
HDAC8-217ENST00000478743 TAF1P21675 1872 aa16.71■□□□□ 0.27
HDAC8-217ENST00000478743 SLC17A8Q8NDX2 589 aa16.71■□□□□ 0.27
HDAC8-217ENST00000478743 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
HDAC8-217ENST00000478743 LAMB4A4D0S4 1761 aa16.7■□□□□ 0.26
HDAC8-217ENST00000478743 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
HDAC8-217ENST00000478743 GPR25O00155 361 aa16.7■□□□□ 0.26
HDAC8-217ENST00000478743 GTF2E1P29083 439 aaPredicted RBP16.7■□□□□ 0.26
HDAC8-217ENST00000478743 TEFQ10587 303 aa16.7■□□□□ 0.26
HDAC8-217ENST00000478743 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
HDAC8-217ENST00000478743 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
HDAC8-217ENST00000478743 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
HDAC8-217ENST00000478743 EN2P19622 333 aaPredicted RBP16.68■□□□□ 0.26
HDAC8-217ENST00000478743 CDCA5Q96FF9 252 aa16.68■□□□□ 0.26
HDAC8-217ENST00000478743 CRAMP1Q96RY5 1269 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms