RNA–Protein interactions for RNA: ENST00000478646.5

PDE11A-208, Transcript of phosphodiesterase 11A, humanhuman

TSL 5

Gene PDE11A, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE11A-208ENST00000478646 PPP2R1AP30153 589 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 HOXA10P31260 410 aaPredicted RBP7.4□□□□□ -1.22
PDE11A-208ENST00000478646 ECE1P42892 770 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 CNGB1Q14028 1251 aaPredicted RBP7.4□□□□□ -1.22
PDE11A-208ENST00000478646 CRY2Q49AN0 593 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 USP50Q70EL3 339 aaPredicted RBP7.4□□□□□ -1.22
PDE11A-208ENST00000478646 MCM10Q7L590 875 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 SYNE4Q8N205 404 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 CCDC24Q8N4L8 307 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 CRAMP1Q96RY5 1269 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 BABAM1Q9NWV8 329 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 MAP3K15Q6ZN16 1313 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 PASKQ96RG2 1323 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 MAPK8IP3Q9UPT6 1336 aa7.4□□□□□ -1.22
PDE11A-208ENST00000478646 TIAM2Q8IVF5 1701 aa7.4□□□□□ -1.23
PDE11A-208ENST00000478646 AFDNP55196 1824 aaKnown RBP7.4□□□□□ -1.23
PDE11A-208ENST00000478646 RASSF10A6NK89 507 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 KCNQ3O43525 872 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 CAPN15O75808 1086 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 ITGBL1O95965 494 aaPredicted RBP7.39□□□□□ -1.23
PDE11A-208ENST00000478646 LMOD3Q0VAK6 560 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 DEFB115Q30KQ5 88 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 HSP90AB3PQ58FF7 597 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 CNTROBQ8N137 903 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 NLRP3Q96P20 1036 aa7.39□□□□□ -1.23
PDE11A-208ENST00000478646 ZNF277Q9NRM2 450 aaPredicted RBP7.39□□□□□ -1.23
PDE11A-208ENST00000478646 SBF1O95248 1867 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 CDHR2Q9BYE9 1310 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 NBPF26B4DH59 902 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 CA12O43570 354 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 NBPF10Q6P3W6 841 aaKnown RBP7.38□□□□□ -1.23
PDE11A-208ENST00000478646 TMC4Q7Z404 712 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 NIM1KQ8IY84 436 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 LARGE2Q8N3Y3 721 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 NBPF15Q8N660 670 aa7.38□□□□□ -1.23
PDE11A-208ENST00000478646 ABT1Q9ULW3 272 aaKnown RBP7.38□□□□□ -1.23
PDE11A-208ENST00000478646 ZNF541Q9H0D2 1346 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 FAM177BA6PVY3 158 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 PPEF1O14829 653 aaPredicted RBP7.37□□□□□ -1.23
PDE11A-208ENST00000478646 BBOX1O75936 387 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 HSP90B1P14625 803 aaKnown RBP7.37□□□□□ -1.23
PDE11A-208ENST00000478646 VEGFBP49765 207 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 EIF4A1P60842 406 aaKnown RBP7.37□□□□□ -1.23
PDE11A-208ENST00000478646 TNIP1Q15025 636 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 NFE2L2Q16236 605 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 GIGYF2Q6Y7W6 1299 aaKnown RBP7.37□□□□□ -1.23
PDE11A-208ENST00000478646 WBP1LQ9NX94 342 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 RRP7AQ9Y3A4 280 aaKnown RBP7.37□□□□□ -1.23
PDE11A-208ENST00000478646 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
PDE11A-208ENST00000478646 FER1L6Q2WGJ9 1857 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 SCN4AP35499 1836 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 SIPA1L3O60292 1781 aaPredicted RBP7.36□□□□□ -1.23
PDE11A-208ENST00000478646 WDR33Q9C0J8 1336 aaKnown RBP7.36□□□□□ -1.23
PDE11A-208ENST00000478646 PRAMEF22A3QJZ6 481 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 FOXN1O15353 648 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 POTEIP0CG38 1075 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 POTEJP0CG39 1038 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 MAP2K2P36507 400 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 PIP4K2AP48426 406 aaPredicted RBP7.36□□□□□ -1.23
PDE11A-208ENST00000478646 DCTN1Q14203 1278 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 HLFQ16534 295 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 SLC10A5Q5PT55 438 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 ZNF34Q8IZ26 560 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 NGEFQ8N5V2 710 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 ZC3H15Q8WU90 426 aaKnown RBP7.36□□□□□ -1.23
PDE11A-208ENST00000478646 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 UTP14AQ9BVJ6 771 aaKnown RBP7.36□□□□□ -1.23
PDE11A-208ENST00000478646 CHMP4AQ9BY43 222 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 DDX21Q9NR30 783 aaKnown RBP eCLIP7.36□□□□□ -1.23
PDE11A-208ENST00000478646 ADARB2Q9NS39 739 aaKnown RBP7.36□□□□□ -1.23
PDE11A-208ENST00000478646 ZNRF3Q9ULT6 936 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 ATP6V0A2Q9Y487 856 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 BCORQ6W2J9 1755 aa7.36□□□□□ -1.23
PDE11A-208ENST00000478646 ANKRD31Q8N7Z5 1873 aa7.35□□□□□ -1.23
PDE11A-208ENST00000478646 PPIP5K2O43314 1243 aa7.35□□□□□ -1.23
PDE11A-208ENST00000478646 MYL6BP14649 208 aa7.35□□□□□ -1.23
PDE11A-208ENST00000478646 MAP1SQ66K74 1059 aaPredicted RBP7.35□□□□□ -1.23
PDE11A-208ENST00000478646 DPP8Q6V1X1 898 aaPredicted RBP7.35□□□□□ -1.23
PDE11A-208ENST00000478646 ZBTB3Q9H5J0 574 aa7.35□□□□□ -1.23
PDE11A-208ENST00000478646 TSPYL4Q9UJ04 414 aa7.35□□□□□ -1.23
PDE11A-208ENST00000478646 ARFGEF2Q9Y6D5 1785 aa7.35□□□□□ -1.23
PDE11A-208ENST00000478646 COL11A2P13942 1736 aaPredicted RBP7.35□□□□□ -1.23
PDE11A-208ENST00000478646 NTSR2O95665 410 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 GPTP24298 496 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 RALBP1Q15311 655 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 SUSD4Q5VX71 490 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 DDX46Q7L014 1031 aaKnown RBP7.34□□□□□ -1.23
PDE11A-208ENST00000478646 NUTM1Q86Y26 1132 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 SP8Q8IXZ3 490 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 MPNDQ8N594 471 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 GPR101Q96P66 508 aaPredicted RBP7.34□□□□□ -1.23
PDE11A-208ENST00000478646 PLEKHF1Q96S99 279 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 RTFDC1Q9BY42 306 aaPredicted RBP7.34□□□□□ -1.23
PDE11A-208ENST00000478646 MIS18AQ9NYP9 233 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 GPRC5DQ9NZD1 345 aa7.34□□□□□ -1.23
PDE11A-208ENST00000478646 DICER1Q9UPY3 1922 aaKnown RBP7.34□□□□□ -1.23
PDE11A-208ENST00000478646 SH3TC1Q8TE82 1336 aa7.33□□□□□ -1.24
PDE11A-208ENST00000478646 H7C1D1 291 aa7.33□□□□□ -1.24
PDE11A-208ENST00000478646 ECM2O94769 699 aaPredicted RBP7.33□□□□□ -1.24
PDE11A-208ENST00000478646 HOXB7P09629 217 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms