RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 FGFR3P22607 806 aa7.12□□□□□ -1.27
SMARCA1-204ENST00000478420 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
SMARCA1-204ENST00000478420 MARK1Q9P0L2 795 aa7.12□□□□□ -1.27
SMARCA1-204ENST00000478420 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
SMARCA1-204ENST00000478420 KCNH4Q9UQ05 1017 aa7.12□□□□□ -1.27
SMARCA1-204ENST00000478420 OPLAHO14841 1288 aa7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 MX2P20592 715 aa7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 KCNQ4P56696 695 aa7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 SFSWAPQ12872 951 aaKnown RBP7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 TREML4Q6UXN2 200 aa7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 ATCAYQ86WG3 371 aa7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 RGL4Q8IZJ4 473 aa7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 PIK3R5Q8WYR1 880 aa7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 RTCBQ9Y3I0 505 aaKnown RBP7.11□□□□□ -1.27
SMARCA1-204ENST00000478420 CD33P20138 364 aa7.1□□□□□ -1.27
SMARCA1-204ENST00000478420 GPR152Q8TDT2 470 aa7.1□□□□□ -1.27
SMARCA1-204ENST00000478420 COL25A1Q9BXS0 654 aaPredicted RBP7.1□□□□□ -1.27
SMARCA1-204ENST00000478420 GZF1Q9H116 711 aaPredicted RBP7.1□□□□□ -1.27
SMARCA1-204ENST00000478420 STRN4Q9NRL3 753 aa7.1□□□□□ -1.27
SMARCA1-204ENST00000478420 NSFL1CQ9UNZ2 370 aaKnown RBP7.1□□□□□ -1.27
SMARCA1-204ENST00000478420 BMP4P12644 408 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 PCSK2P16519 638 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 ARHGAP4P98171 946 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 DNM1Q05193 864 aaKnown RBP7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 GAS6Q14393 721 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 ECM1Q16610 540 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 FAM182BQ5T319 152 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 CMTR1Q8N1G2 835 aaKnown RBP7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 MBIPQ9NS73 344 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 USP20Q9Y2K6 914 aa7.09□□□□□ -1.27
SMARCA1-204ENST00000478420 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 CTBSQ01459 385 aa7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 RNFT1Q5M7Z0 435 aa7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 SND1Q7KZF4 910 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 TTC16Q8NEE8 873 aa7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 EDEM1Q92611 657 aa7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 C11orf16Q9NQ32 467 aa7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 HCN2Q9UL51 889 aa7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 BRPF3Q9ULD4 1205 aa7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 FNDC3AQ9Y2H6 1198 aaKnown RBP7.08□□□□□ -1.28
SMARCA1-204ENST00000478420 NDUFB5O43674 189 aa7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 GRNP28799 593 aaKnown RBP7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 USP5P45974 858 aa7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 SPEM2Q0P670 501 aa7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 NEUROD1Q13562 356 aa7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 NUDT16Q96DE0 195 aaKnown RBP7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 CNTNAP3BQ96NU0 1288 aa7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 CNTNAP3Q9BZ76 1288 aa7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
SMARCA1-204ENST00000478420 FZD6O60353 706 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 XYLBO75191 536 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 PDGFAP04085 211 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 GMPRP36959 345 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 MAP2K3P46734 347 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 CCINQ13939 588 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 GRIN2CQ14957 1233 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 PNMA5Q96PV4 448 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 CCDC87Q9NVE4 849 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 POLIQ9UNA4 740 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 KCNMB2Q9Y691 235 aa7.06□□□□□ -1.28
SMARCA1-204ENST00000478420 UBAP1LF5GYI3 381 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 EGFRP00533 1210 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 KRT76Q01546 638 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 SRSF11Q05519 484 aaKnown RBP7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 C8orf34Q49A92 452 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 SLC30A3Q99726 388 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 GSX2Q9BZM3 304 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 EFCC1Q9HA90 598 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 IGF1RP08069 1367 aa7.05□□□□□ -1.28
SMARCA1-204ENST00000478420 C2CD2LO14523 706 aa7.04□□□□□ -1.28
SMARCA1-204ENST00000478420 BHMTQ93088 406 aa7.04□□□□□ -1.28
SMARCA1-204ENST00000478420 CITED4Q96RK1 184 aa7.04□□□□□ -1.28
SMARCA1-204ENST00000478420 AVENQ9NQS1 362 aaPredicted RBP7.04□□□□□ -1.28
SMARCA1-204ENST00000478420 DCTN4Q9UJW0 460 aa7.04□□□□□ -1.28
SMARCA1-204ENST00000478420 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 SASH3O75995 380 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 MAPK1P28482 360 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 MARSP56192 900 aaKnown RBP7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 EHHADHQ08426 723 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 TRIP4Q15650 581 aaPredicted RBP7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 ZNF468Q5VIY5 522 aaPredicted RBP7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 KRT25Q7Z3Z0 450 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 RAB44Q7Z6P3 723 aaPredicted RBP7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 STK17AQ9UEE5 414 aa7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.03□□□□□ -1.28
SMARCA1-204ENST00000478420 ADAMTS2O95450 1211 aa7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 ARAFP10398 606 aa7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 NFKB1P19838 968 aa7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 TARSP26639 723 aaKnown RBP7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 PDE3BQ13370 1112 aa7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 PDE12Q6L8Q7 609 aaKnown RBP7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 SYT9Q86SS6 491 aa7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 NLRP13Q86W25 1043 aa7.02□□□□□ -1.29
SMARCA1-204ENST00000478420 GJD3Q8N144 294 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms