RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
DDX39B-218ENST00000478365 GRIPAP1Q4V328 841 aa10.17□□□□□ -0.78
DDX39B-218ENST00000478365 SALL2Q9Y467 1007 aaPredicted RBP10.17□□□□□ -0.78
DDX39B-218ENST00000478365 GOLGB1Q14789 3259 aaKnown RBP10.17□□□□□ -0.78
DDX39B-218ENST00000478365 ELL2O00472 640 aaPredicted RBP10.16□□□□□ -0.78
DDX39B-218ENST00000478365 NTSR2O95665 410 aa10.16□□□□□ -0.78
DDX39B-218ENST00000478365 ANXA1P04083 346 aa10.16□□□□□ -0.78
DDX39B-218ENST00000478365 CT47B1P0C2W7 299 aaPredicted RBP10.16□□□□□ -0.78
DDX39B-218ENST00000478365 GPTP24298 496 aa10.16□□□□□ -0.78
DDX39B-218ENST00000478365 CHRNA5P30532 468 aa10.16□□□□□ -0.78
DDX39B-218ENST00000478365 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
DDX39B-218ENST00000478365 RIC3Q7Z5B4 369 aa10.16□□□□□ -0.78
DDX39B-218ENST00000478365 UBN2Q6ZU65 1347 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 SH3TC1Q8TE82 1336 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 ZC3H4Q9UPT8 1303 aaKnown RBP10.15□□□□□ -0.78
DDX39B-218ENST00000478365 CRY2Q49AN0 593 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 NLRP10Q86W26 655 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 TSPYL6Q8N831 410 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 RPGRQ92834 1020 aaKnown RBP10.15□□□□□ -0.78
DDX39B-218ENST00000478365 ZNF622Q969S3 477 aaKnown RBP eCLIP10.15□□□□□ -0.781e-13■■□□□ 11.7
DDX39B-218ENST00000478365 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 ISCA1Q9BUE6 129 aa10.15□□□□□ -0.78
DDX39B-218ENST00000478365 TMX4Q9H1E5 349 aaPredicted RBP10.15□□□□□ -0.78
DDX39B-218ENST00000478365 COL11A2P13942 1736 aaPredicted RBP10.15□□□□□ -0.78
DDX39B-218ENST00000478365 EXOSC9Q06265 439 aaKnown RBP10.14□□□□□ -0.79
DDX39B-218ENST00000478365 SLC10A5Q5PT55 438 aa10.14□□□□□ -0.79
DDX39B-218ENST00000478365 SUSD4Q5VX71 490 aa10.14□□□□□ -0.79
DDX39B-218ENST00000478365 KSR2Q6VAB6 950 aa10.14□□□□□ -0.79
DDX39B-218ENST00000478365 ARHGAP27Q6ZUM4 889 aa10.14□□□□□ -0.79
DDX39B-218ENST00000478365 CCDC191Q8NCU4 936 aa10.14□□□□□ -0.79
DDX39B-218ENST00000478365 TRMT112Q9UI30 125 aaKnown RBP10.14□□□□□ -0.79
DDX39B-218ENST00000478365 LTBP3Q9NS15 1303 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 FAM177BA6PVY3 158 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 VAMP4O75379 141 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 HOXA10P31260 410 aaPredicted RBP10.13□□□□□ -0.79
DDX39B-218ENST00000478365 FLIIQ13045 1269 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 TMC4Q7Z404 712 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 MIER1Q8N108 512 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 RBM17Q96I25 401 aaKnown RBP10.13□□□□□ -0.79
DDX39B-218ENST00000478365 CRAMP1Q96RY5 1269 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 METTL22Q9BUU2 404 aaPredicted RBP10.13□□□□□ -0.79
DDX39B-218ENST00000478365 ABCC12Q96J65 1359 aa10.13□□□□□ -0.79
DDX39B-218ENST00000478365 LAMB2P55268 1798 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 LMNB1P20700 586 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 SLFN5Q08AF3 891 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 ERFEQ4G0M1 354 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 CCDC93Q567U6 631 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 PRPF40BQ6NWY9 871 aaKnown RBP10.12□□□□□ -0.79
DDX39B-218ENST00000478365 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 RTKN2Q8IZC4 609 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 PHAXQ9H814 394 aaKnown RBP10.12□□□□□ -0.79
DDX39B-218ENST00000478365 CWC25Q9NXE8 425 aaPredicted RBP10.12□□□□□ -0.79
DDX39B-218ENST00000478365 ADCY9O60503 1353 aa10.12□□□□□ -0.79
DDX39B-218ENST00000478365 PI4KAP2A4QPH2 592 aa10.11□□□□□ -0.79
DDX39B-218ENST00000478365 PCCAP05165 728 aaPredicted RBP10.11□□□□□ -0.79
DDX39B-218ENST00000478365 FKBP5Q13451 457 aaPredicted RBP10.11□□□□□ -0.79
DDX39B-218ENST00000478365 PI4KAP1Q8N8J0 262 aa10.11□□□□□ -0.79
DDX39B-218ENST00000478365 ZBTB38Q8NAP3 1195 aaPredicted RBP10.11□□□□□ -0.79
DDX39B-218ENST00000478365 TAOK3Q9H2K8 898 aa10.11□□□□□ -0.79
DDX39B-218ENST00000478365 MAP3K2Q9Y2U5 619 aa10.11□□□□□ -0.79
DDX39B-218ENST00000478365 UTRNP46939 3433 aa10.11□□□□□ -0.79
DDX39B-218ENST00000478365 FER1L6Q2WGJ9 1857 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 SLX4Q8IY92 1834 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 TNRC6CQ9HCJ0 1690 aaKnown RBP10.1□□□□□ -0.79
DDX39B-218ENST00000478365 ALDH1L2Q3SY69 923 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 DDX46Q7L014 1031 aaKnown RBP10.1□□□□□ -0.79
DDX39B-218ENST00000478365 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 MYD88Q99836 296 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 WWC3Q9ULE0 1092 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 SBF1O95248 1867 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 CACNA1SQ13698 1873 aa10.1□□□□□ -0.79
DDX39B-218ENST00000478365 PTPRCP08575 1304 aa10.09□□□□□ -0.79
DDX39B-218ENST00000478365 CDHR2Q9BYE9 1310 aa10.09□□□□□ -0.79
DDX39B-218ENST00000478365 SENP3-EIF4A1A0A087X0R7 540 aa10.09□□□□□ -0.79
DDX39B-218ENST00000478365 ATP5J2-PTCD1G3V325 749 aa10.09□□□□□ -0.79
DDX39B-218ENST00000478365 IRS4O14654 1257 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-218ENST00000478365 C21orf2O43822 256 aa10.09□□□□□ -0.79
DDX39B-218ENST00000478365 BBOX1O75936 387 aa10.09□□□□□ -0.79
DDX39B-218ENST00000478365 SF3B3Q15393 1217 aaKnown RBP10.09□□□□□ -0.79
DDX39B-218ENST00000478365 TRMT2AQ8IZ69 625 aaKnown RBP10.09□□□□□ -0.79
DDX39B-218ENST00000478365 LINS1Q8NG48 757 aa10.09□□□□□ -0.79
DDX39B-218ENST00000478365 SPINK5Q9NQ38 1064 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-218ENST00000478365 DICER1Q9UPY3 1922 aaKnown RBP10.09□□□□□ -0.79
DDX39B-218ENST00000478365 MYH3P11055 1940 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 EIF5BO60841 1220 aaKnown RBP10.08□□□□□ -0.8
DDX39B-218ENST00000478365 FKBP4Q02790 459 aaKnown RBP eCLIP10.08□□□□□ -0.8
DDX39B-218ENST00000478365 CCDC152Q4G0S7 254 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 C9orf131Q5VYM1 1079 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 ZNF784Q8NCA9 323 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-218ENST00000478365 SUPT20HQ8NEM7 779 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 PSMD1Q99460 953 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 VPS33BQ9H267 617 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 RNF181Q9P0P0 153 aa10.08□□□□□ -0.8
DDX39B-218ENST00000478365 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
DDX39B-218ENST00000478365 DDX60Q8IY21 1712 aaKnown RBP10.07□□□□□ -0.8
DDX39B-218ENST00000478365 NEURL1BA8MQ27 555 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms