RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 NUCB2P80303 420 aa15.12■□□□□ 0.01
TRAF3IP3-213ENST00000478359 RAB3GAP1Q15042 981 aa15.12■□□□□ 0.01
TRAF3IP3-213ENST00000478359 EPHA10Q5JZY3 1008 aa15.12■□□□□ 0.01
TRAF3IP3-213ENST00000478359 TTLL7Q6ZT98 887 aa15.12■□□□□ 0.01
TRAF3IP3-213ENST00000478359 CERKQ8TCT0 537 aa15.12■□□□□ 0.01
TRAF3IP3-213ENST00000478359 EAF2Q96CJ1 260 aaPredicted RBP15.12■□□□□ 0.01
TRAF3IP3-213ENST00000478359 HSP90AB3PQ58FF7 597 aa15.11■□□□□ 0.01
TRAF3IP3-213ENST00000478359 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
TRAF3IP3-213ENST00000478359 TJP1Q07157 1748 aa15.11■□□□□ 0.01
TRAF3IP3-213ENST00000478359 NRAPQ86VF7 1730 aa15.11■□□□□ 0.01
TRAF3IP3-213ENST00000478359 NWD2Q9ULI1 1742 aa15.11■□□□□ 0.01
TRAF3IP3-213ENST00000478359 TCIRG1Q13488 830 aa15.1■□□□□ 0.01
TRAF3IP3-213ENST00000478359 SIL1Q9H173 461 aa15.1■□□□□ 0.01
TRAF3IP3-213ENST00000478359 GPR108Q9NPR9 543 aa15.1■□□□□ 0.01
TRAF3IP3-213ENST00000478359 TOM1O60784 492 aa15.1■□□□□ 0.01
TRAF3IP3-213ENST00000478359 NEK4P51957 841 aa15.1■□□□□ 0.01
TRAF3IP3-213ENST00000478359 ISCA1Q9BUE6 129 aa15.1■□□□□ 0.01
TRAF3IP3-213ENST00000478359 RFX7Q2KHR2 1363 aa15.1■□□□□ 0.01
TRAF3IP3-213ENST00000478359 FOXO4P98177 505 aa15.09■□□□□ 0.01
TRAF3IP3-213ENST00000478359 LMBR1LQ6UX01 489 aa15.09■□□□□ 0.01
TRAF3IP3-213ENST00000478359 ZBTB3Q9H5J0 574 aa15.09■□□□□ 0.01
TRAF3IP3-213ENST00000478359 ASAP1Q9ULH1 1129 aa15.09■□□□□ 0.01
TRAF3IP3-213ENST00000478359 SPATA31A1Q5TZJ5 1347 aa15.08■□□□□ 0.01
TRAF3IP3-213ENST00000478359 MAP4K4O95819 1239 aaPredicted RBP15.08■□□□□ 0.01
TRAF3IP3-213ENST00000478359 ATP5JP18859 108 aa15.08■□□□□ 0.01
TRAF3IP3-213ENST00000478359 TNNI3KQ59H18 835 aa15.08■□□□□ 0.01
TRAF3IP3-213ENST00000478359 FPGT-TNNI3KV9GXZ4 949 aa15.08■□□□□ 0.01
TRAF3IP3-213ENST00000478359 IL15P40933 162 aaPredicted RBP15.08■□□□□ 0
TRAF3IP3-213ENST00000478359 CWC27Q6UX04 472 aaKnown RBP15.08■□□□□ 0
TRAF3IP3-213ENST00000478359 CLEC17AQ6ZS10 378 aa15.08■□□□□ 0
TRAF3IP3-213ENST00000478359 DNAJC10Q8IXB1 793 aa15.08■□□□□ 0
TRAF3IP3-213ENST00000478359 LSG1Q9H089 658 aaKnown RBP15.08■□□□□ 0
TRAF3IP3-213ENST00000478359 CCDC8Q9H0W5 538 aaPredicted RBP15.08■□□□□ 0
TRAF3IP3-213ENST00000478359 SNRKQ9NRH2 765 aa15.08■□□□□ 0
TRAF3IP3-213ENST00000478359 GOLGA6L22H0YM25 854 aa15.07■□□□□ 0
TRAF3IP3-213ENST00000478359 CIAO1O76071 339 aa15.07■□□□□ 0
TRAF3IP3-213ENST00000478359 INTS4Q96HW7 963 aaKnown RBP15.07■□□□□ 0
TRAF3IP3-213ENST00000478359 PLA2G12BQ9BX93 195 aa15.07■□□□□ 0
TRAF3IP3-213ENST00000478359 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 UBAP1LF5GYI3 381 aa15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 PCCAP05165 728 aaPredicted RBP15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 DDB1Q16531 1140 aa15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 GIGYF2Q6Y7W6 1299 aaKnown RBP15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 KLHDC4Q8TBB5 520 aa15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 TNPO1Q92973 898 aaKnown RBP15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 DOT1LQ8TEK3 1739 aa15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 TFCP2Q12800 502 aa15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 SKOR2Q2VWA4 1001 aaPredicted RBP15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
TRAF3IP3-213ENST00000478359 CDHR2Q9BYE9 1310 aa15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 ANKRD36CQ5JPF3 1778 aa15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 CYP19A1P11511 503 aaPredicted RBP15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 BARGINQ6ZT62 677 aa15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 ZBTB38Q8NAP3 1195 aaPredicted RBP15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 PALD1Q9ULE6 856 aa15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 CICQ96RK0 1608 aaPredicted RBP15.05■□□□□ -0
TRAF3IP3-213ENST00000478359 ERVV-1B6SEH8 477 aa15.04■□□□□ -0
TRAF3IP3-213ENST00000478359 PIP4K2BP78356 416 aa15.04■□□□□ -0
TRAF3IP3-213ENST00000478359 CUL4AQ13619 759 aa15.04■□□□□ -0
TRAF3IP3-213ENST00000478359 FSD1Q9BTV5 496 aa15.04■□□□□ -0
TRAF3IP3-213ENST00000478359 EYA2O00167 538 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 CCDC57Q2TAC2 916 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 TMX3Q96JJ7 454 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 TM6SF1Q9BZW5 370 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 IL25Q9H293 177 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 BOLA2Q9H3K6 86 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 DBNLQ9UJU6 430 aaKnown RBP15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 SLIT2O94813 1529 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 SPATA31A5Q5VU36 1347 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 CCDC171Q6TFL3 1326 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 SPATA31A7Q8IWB4 1347 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 RNF20Q5VTR2 975 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 KCNB2Q92953 911 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 TLR7Q9NYK1 1049 aaKnown RBP15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 SNX14Q9Y5W7 946 aa15.03■□□□□ -0
TRAF3IP3-213ENST00000478359 SPEF2Q9C093 1822 aa15.02■□□□□ -0
TRAF3IP3-213ENST00000478359 ADAMTS2O95450 1211 aa15.02■□□□□ -0
TRAF3IP3-213ENST00000478359 AKAP2Q9Y2D5 859 aa15.02■□□□□ -0
TRAF3IP3-213ENST00000478359 ZNF330Q9Y3S2 320 aaPredicted RBP15.02■□□□□ -0
TRAF3IP3-213ENST00000478359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.02■□□□□ -0
TRAF3IP3-213ENST00000478359 ATG9AQ7Z3C6 839 aa15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 HAUS7Q99871 368 aa15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 CYP2E1P05181 493 aaPredicted RBP15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 CSF1RP07333 972 aa15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 MAP4K1Q92918 833 aa15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 AK7Q96M32 723 aa15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 HMG20BQ9P0W2 317 aa15.01□□□□□ -0.01
TRAF3IP3-213ENST00000478359 TRAK2O60296 914 aa15□□□□□ -0.01
TRAF3IP3-213ENST00000478359 PSMA5P28066 241 aa15□□□□□ -0.01
TRAF3IP3-213ENST00000478359 NMIQ13287 307 aaPredicted RBP15□□□□□ -0.01
TRAF3IP3-213ENST00000478359 NECTIN1Q15223 517 aa15□□□□□ -0.01
TRAF3IP3-213ENST00000478359 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms