RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 TMX4Q9H1E5 349 aaPredicted RBP19.4■□□□□ 0.7
SNX21-210ENST00000478230 ZC3H4Q9UPT8 1303 aaKnown RBP19.4■□□□□ 0.7
SNX21-210ENST00000478230 ADCY9O60503 1353 aa19.4■□□□□ 0.7
SNX21-210ENST00000478230 CRY2Q49AN0 593 aa19.39■□□□□ 0.69
SNX21-210ENST00000478230 GRIPAP1Q4V328 841 aa19.39■□□□□ 0.69
SNX21-210ENST00000478230 NLRP10Q86W26 655 aa19.39■□□□□ 0.69
SNX21-210ENST00000478230 TRMT112Q9UI30 125 aaKnown RBP19.39■□□□□ 0.69
SNX21-210ENST00000478230 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.69
SNX21-210ENST00000478230 TRIM28Q13263 835 aaKnown RBP19.38■□□□□ 0.69
SNX21-210ENST00000478230 CCDC93Q567U6 631 aa19.38■□□□□ 0.69
SNX21-210ENST00000478230 CC2D2BQ6DHV5 1058 aa19.38■□□□□ 0.69
SNX21-210ENST00000478230 RTKN2Q8IZC4 609 aa19.38■□□□□ 0.69
SNX21-210ENST00000478230 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
SNX21-210ENST00000478230 LTBP3Q9NS15 1303 aa19.37■□□□□ 0.69
SNX21-210ENST00000478230 TSPYL6Q8N831 410 aa19.37■□□□□ 0.69
SNX21-210ENST00000478230 CRAMP1Q96RY5 1269 aa19.37■□□□□ 0.69
SNX21-210ENST00000478230 ZNF219Q9P2Y4 722 aaPredicted RBP19.37■□□□□ 0.69
SNX21-210ENST00000478230 KDM2BQ8NHM5 1336 aa19.36■□□□□ 0.69
SNX21-210ENST00000478230 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
SNX21-210ENST00000478230 HOXA10P31260 410 aaPredicted RBP19.36■□□□□ 0.69
SNX21-210ENST00000478230 TAOK3Q9H2K8 898 aa19.36■□□□□ 0.69
SNX21-210ENST00000478230 FANCIQ9NVI1 1328 aa19.35■□□□□ 0.69
SNX21-210ENST00000478230 ISCA1Q9BUE6 129 aa19.35■□□□□ 0.69
SNX21-210ENST00000478230 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
SNX21-210ENST00000478230 ABCC12Q96J65 1359 aa19.34■□□□□ 0.69
SNX21-210ENST00000478230 NEXNQ0ZGT2 675 aa19.34■□□□□ 0.69
SNX21-210ENST00000478230 ZNF526Q8TF50 670 aaPredicted RBP19.34■□□□□ 0.69
SNX21-210ENST00000478230 NFKBIEO00221 500 aa19.33■□□□□ 0.68
SNX21-210ENST00000478230 SLC4A2P04920 1241 aa19.33■□□□□ 0.68
SNX21-210ENST00000478230 RASSF7Q02833 373 aa19.33■□□□□ 0.68
SNX21-210ENST00000478230 DPY19L2Q6NUT2 758 aa19.33■□□□□ 0.68
SNX21-210ENST00000478230 CCDC191Q8NCU4 936 aa19.33■□□□□ 0.68
SNX21-210ENST00000478230 C7orf43Q8WVR3 580 aa19.33■□□□□ 0.68
SNX21-210ENST00000478230 ATP5J2-PTCD1G3V325 749 aa19.32■□□□□ 0.68
SNX21-210ENST00000478230 KSR2Q6VAB6 950 aa19.32■□□□□ 0.68
SNX21-210ENST00000478230 DDX46Q7L014 1031 aaKnown RBP19.32■□□□□ 0.68
SNX21-210ENST00000478230 METTL22Q9BUU2 404 aaPredicted RBP19.32■□□□□ 0.68
SNX21-210ENST00000478230 VAMP4O75379 141 aa19.31■□□□□ 0.68
SNX21-210ENST00000478230 BBOX1O75936 387 aa19.31■□□□□ 0.68
SNX21-210ENST00000478230 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNX21-210ENST00000478230 EXOSC9Q06265 439 aaKnown RBP19.31■□□□□ 0.68
SNX21-210ENST00000478230 COL11A2P13942 1736 aaPredicted RBP19.31■□□□□ 0.68
SNX21-210ENST00000478230 C1QTNF8P60827 252 aa19.3■□□□□ 0.68
SNX21-210ENST00000478230 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
SNX21-210ENST00000478230 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
SNX21-210ENST00000478230 MYD88Q99836 296 aa19.3■□□□□ 0.68
SNX21-210ENST00000478230 CWC25Q9NXE8 425 aaPredicted RBP19.3■□□□□ 0.68
SNX21-210ENST00000478230 ANKRD36CQ5JPF3 1778 aa19.29■□□□□ 0.68
SNX21-210ENST00000478230 E9PSI1 815 aa19.29■□□□□ 0.68
SNX21-210ENST00000478230 HCLS1P14317 486 aaPredicted RBP19.29■□□□□ 0.68
SNX21-210ENST00000478230 DIEXFQ68CQ4 756 aaKnown RBP19.29■□□□□ 0.68
SNX21-210ENST00000478230 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
SNX21-210ENST00000478230 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
SNX21-210ENST00000478230 SLX4Q8IY92 1834 aa19.29■□□□□ 0.68
SNX21-210ENST00000478230 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
SNX21-210ENST00000478230 PPEF1O14829 653 aaPredicted RBP19.28■□□□□ 0.68
SNX21-210ENST00000478230 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
SNX21-210ENST00000478230 FAM89AQ96GI7 184 aa19.28■□□□□ 0.68
SNX21-210ENST00000478230 PSMD1Q99460 953 aa19.28■□□□□ 0.68
SNX21-210ENST00000478230 ARFGEF2Q9Y6D5 1785 aa19.28■□□□□ 0.68
SNX21-210ENST00000478230 GLTPD2A6NH11 291 aa19.27■□□□□ 0.68
SNX21-210ENST00000478230 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
SNX21-210ENST00000478230 PCCAP05165 728 aaPredicted RBP19.27■□□□□ 0.68
SNX21-210ENST00000478230 FLIIQ13045 1269 aa19.27■□□□□ 0.68
SNX21-210ENST00000478230 FKBP5Q13451 457 aaPredicted RBP19.27■□□□□ 0.68
SNX21-210ENST00000478230 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
SNX21-210ENST00000478230 ZNF521Q96K83 1311 aa19.26■□□□□ 0.67
SNX21-210ENST00000478230 TCERG1O14776 1098 aaKnown RBP19.26■□□□□ 0.67
SNX21-210ENST00000478230 GRAPQ13588 217 aa19.26■□□□□ 0.67
SNX21-210ENST00000478230 SUPT20HQ8NEM7 779 aa19.26■□□□□ 0.67
SNX21-210ENST00000478230 GRAPLQ8TC17 118 aaPredicted RBP19.26■□□□□ 0.67
SNX21-210ENST00000478230 VPS33BQ9H267 617 aa19.26■□□□□ 0.67
SNX21-210ENST00000478230 ATP6V0A2Q9Y487 856 aa19.26■□□□□ 0.67
SNX21-210ENST00000478230 SBF1O95248 1867 aa19.26■□□□□ 0.67
SNX21-210ENST00000478230 UTRNP46939 3433 aa19.25■□□□□ 0.67
SNX21-210ENST00000478230 SP8Q8IXZ3 490 aa19.25■□□□□ 0.67
SNX21-210ENST00000478230 SYNE4Q8N205 404 aa19.25■□□□□ 0.67
SNX21-210ENST00000478230 JDP2Q8WYK2 163 aa19.25■□□□□ 0.67
SNX21-210ENST00000478230 ZNF428Q96B54 188 aa19.25■□□□□ 0.67
SNX21-210ENST00000478230 FER1L6Q2WGJ9 1857 aa19.24■□□□□ 0.67
SNX21-210ENST00000478230 PDE8AO60658 829 aa19.24■□□□□ 0.67
SNX21-210ENST00000478230 C3orf67Q6ZVT6 689 aa19.24■□□□□ 0.67
SNX21-210ENST00000478230 SPINK5Q9NQ38 1064 aaPredicted RBP19.24■□□□□ 0.67
SNX21-210ENST00000478230 GOLGB1Q14789 3259 aaKnown RBP19.24■□□□□ 0.67
SNX21-210ENST00000478230 CACNA1FO60840 1977 aa19.23■□□□□ 0.67
SNX21-210ENST00000478230 KIF3CO14782 793 aa19.23■□□□□ 0.67
SNX21-210ENST00000478230 TOMM70O94826 608 aa19.23■□□□□ 0.67
SNX21-210ENST00000478230 VEGFAP15692 232 aaPredicted RBP19.23■□□□□ 0.67
SNX21-210ENST00000478230 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
SNX21-210ENST00000478230 CCDC152Q4G0S7 254 aa19.23■□□□□ 0.67
SNX21-210ENST00000478230 DNAAF4Q8WXU2 420 aa19.23■□□□□ 0.67
SNX21-210ENST00000478230 TNRC6CQ9HCJ0 1690 aaKnown RBP19.23■□□□□ 0.67
SNX21-210ENST00000478230 ABCC4O15439 1325 aa19.23■□□□□ 0.67
SNX21-210ENST00000478230 PRELPP51888 382 aa19.22■□□□□ 0.67
SNX21-210ENST00000478230 RTL5Q5HYW3 569 aaPredicted RBP19.22■□□□□ 0.67
SNX21-210ENST00000478230 NMRK2Q9NPI5 230 aa19.22■□□□□ 0.67
SNX21-210ENST00000478230 ZNF277Q9NRM2 450 aaPredicted RBP19.22■□□□□ 0.67
SNX21-210ENST00000478230 CACNA1SQ13698 1873 aa19.22■□□□□ 0.67
SNX21-210ENST00000478230 CDHR2Q9BYE9 1310 aa19.22■□□□□ 0.67
SNX21-210ENST00000478230 G2E3Q7L622 706 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms